MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-5-g2d87a4c8ad5d) initialized Starting run at 05:39:26 UTC on 2022-10-11. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-5-g2d87a4c8a Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015560757 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.364158906 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.34707999 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345082621 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344301689 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353453881 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351467083 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338926623 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339521707 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339180692 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.338623744 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010286713 seconds Ending run at 05:39:30 UTC on 2022-10-11. Run time = 3.66797601 Run time without initialization = 3.480060115 Average number of zones advanced per microsecond: 0.753 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.666 ... 3.668 ... 3.668 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0971 2.4173 2.5189 68.67% Castro::do_advance_ctu() 10 0.04426 0.1471 0.4709 12.84% Gravity::make_radial_gravity() 21 0.3386 0.3513 0.3726 10.16% Castro::initData() 1 0.03948 0.07912 0.1206 3.29% FabArray::ParallelCopy_finish() 41 0.04453 0.06318 0.1176 3.21% Castro::estTimeStep() 21 0.02728 0.07113 0.1094 2.98% FabArray::setVal() 143 0.06214 0.07062 0.07385 2.01% Castro::reset_internal_energy(Fab) 1008 0.04893 0.05029 0.05151 1.40% FabArray::ParallelCopy_nowait() 41 0.02873 0.04483 0.05048 1.38% StateData::FillBoundary(geom) 41 0.03588 0.04225 0.04558 1.24% Castro::normalize_species() 62 0.04008 0.04115 0.04239 1.16% FillPatchIterator::Initialize 41 0.02365 0.03573 0.04021 1.10% Gravity::interpolate_monopole_grav() 21 0.02581 0.02733 0.02802 0.76% Castro::construct_new_gravity_source() 10 0.02006 0.02291 0.02372 0.65% Castro::expand_state() 10 0.009516 0.01798 0.02145 0.58% Castro::computeTemp() 63 0.01767 0.01925 0.02008 0.55% Castro::initialize_do_advance() 10 0.009504 0.01713 0.0193 0.53% MultiFab::Saxpy() 20 0.01061 0.01471 0.01625 0.44% VisMF::Write(FabArray) 2 0.01227 0.01296 0.01558 0.42% Amr::writePlotFile() 2 0.01053 0.01323 0.0139 0.38% Gravity::get_new_grav_vector() 11 0.007641 0.01163 0.01306 0.36% FabArray::setDomainBndry() 41 0.004869 0.01043 0.01252 0.34% MultiFab::contains_nan() 20 0.009865 0.01124 0.01248 0.34% Castro::construct_old_gravity_source() 10 0.00491 0.01023 0.01192 0.32% Castro::initialize_advance() 10 0.01061 0.01089 0.01149 0.31% Gravity::get_old_grav_vector() 10 0.005413 0.00949 0.01119 0.30% Castro::initMFs() 1 0.006571 0.006993 0.008233 0.22% main() 1 0.004836 0.006613 0.007199 0.20% Castro::construct_new_source() 50 0.004883 0.006498 0.007112 0.19% Castro::enforce_min_density() 62 0.005751 0.006213 0.006861 0.19% StateData::define() 4 0.005448 0.005704 0.006243 0.17% Castro::swap_state_time_levels() 10 0.003485 0.004647 0.004865 0.13% Amr::coarseTimeStep() 10 0.001082 0.001692 0.003235 0.09% Castro::buildMetrics() 1 0.00154 0.001612 0.001806 0.05% Castro::finalize_do_advance() 10 0.0006471 0.001408 0.001597 0.04% Amr::InitAmr() 1 0.0002656 0.0003296 0.0005743 0.02% Amr::timeStep() 10 0.0001682 0.0002222 0.000412 0.01% DistributionMapping::LeastUsedCPUs() 1 9.947e-06 0.0003281 0.0003809 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0003033 0.0003182 0.0003286 0.01% Castro::clean_state() 62 0.0001554 0.0001725 0.0001999 0.01% StateDataPhysBCFunct::() 41 9.031e-05 0.000112 0.0001365 0.00% Amr::FinalizeInit() 1 3.666e-06 1.7e-05 0.0001036 0.00% Castro::construct_old_source() 50 4.106e-05 7.628e-05 9.898e-05 0.00% Castro::enforce_consistent_e() 1 7.881e-05 8.772e-05 9.327e-05 0.00% FabArray::ParallelCopy() 41 6.529e-05 8.175e-05 9.189e-05 0.00% Castro::subcycle_advance_ctu() 10 3.953e-05 6.299e-05 8.86e-05 0.00% Castro::do_old_sources() 10 4.869e-05 7.069e-05 8.813e-05 0.00% Castro::do_new_sources() 10 5.252e-05 7.027e-05 8.568e-05 0.00% Castro::Castro() 1 5.276e-05 6.671e-05 8.204e-05 0.00% FillPatchSingleLevel 41 6.154e-05 7.109e-05 7.655e-05 0.00% Castro::construct_old_gravity() 10 3.506e-05 5.688e-05 7.178e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 5.511e-05 7.11e-05 0.00% Castro::advance() 10 3.648e-05 5.185e-05 6.231e-05 0.00% Castro::apply_source_to_state() 20 3.526e-05 4.792e-05 6.151e-05 0.00% FabArrayBase::getCPC() 41 4.126e-05 5.463e-05 6.09e-05 0.00% Castro::finalize_advance() 10 4.847e-05 5.474e-05 6.029e-05 0.00% Castro::construct_new_gravity() 10 3.688e-05 4.665e-05 5.649e-05 0.00% Amr::defBaseLevel() 1 2.36e-05 3.225e-05 4.586e-05 0.00% Castro::enforce_speed_limit() 62 2.026e-05 2.637e-05 3.378e-05 0.00% FabArrayBase::CPC::define() 2 2.225e-05 2.589e-05 3.338e-05 0.00% Castro::check_for_nan() 20 2.11e-05 2.616e-05 3.246e-05 0.00% Castro::post_timestep() 10 1.364e-05 2.139e-05 2.689e-05 0.00% Castro::computeNewDt() 9 9.538e-06 1.344e-05 2.198e-05 0.00% Gravity::swapTimeLevels() 10 7.274e-06 1.312e-05 1.666e-05 0.00% Castro::create_source_corrector() 10 7.188e-06 1.089e-05 1.365e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.872e-06 9.983e-06 1.279e-05 0.00% Gravity::set_mass_offset() 10 6.756e-06 9.691e-06 1.141e-05 0.00% Castro::FluxRegCrseInit 10 5.236e-06 9.129e-06 1.091e-05 0.00% Castro::post_init() 1 3.123e-06 4.771e-06 1.055e-05 0.00% Amr::initSubcycle() 1 8.026e-06 9.086e-06 1.002e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.682e-06 4.917e-06 8.564e-06 0.00% Castro::retry_advance_ctu() 10 4.03e-06 6.246e-06 7.435e-06 0.00% Amr::InitializeInit() 1 1.886e-06 3.203e-06 6.649e-06 0.00% Castro::computeInitialDt() 2 3.133e-06 4.046e-06 5.07e-06 0.00% Castro::post_regrid() 1 1.784e-06 3.129e-06 4.975e-06 0.00% Castro::FluxRegFineAdd() 10 1.79e-06 2.368e-06 3.537e-06 0.00% Amr::init() 1 2.116e-06 2.242e-06 2.509e-06 0.00% DistributionMapping::Distribute() 1 9.69e-07 1.199e-06 1.946e-06 0.00% Amr::initialInit() 1 1.143e-06 1.382e-06 1.765e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.666 3.668 3.668 100.00% Amr::coarseTimeStep() 10 3.463 3.463 3.463 94.40% Amr::timeStep() 10 3.451 3.453 3.454 94.15% Castro::advance() 10 3.436 3.437 3.437 93.71% Castro::subcycle_advance_ctu() 10 3.362 3.363 3.365 91.74% Castro::do_advance_ctu() 10 3.362 3.363 3.365 91.74% Castro::construct_ctu_hydro_source() 10 2.097 2.417 2.519 68.67% Gravity::make_radial_gravity() 21 0.3386 0.3513 0.3726 10.16% Gravity::get_new_grav_vector() 11 0.2266 0.2307 0.2328 6.35% Castro::construct_old_gravity() 10 0.1987 0.2106 0.2273 6.20% Gravity::get_old_grav_vector() 10 0.1979 0.2098 0.2267 6.18% FillPatchIterator::Initialize 41 0.189 0.1968 0.2119 5.78% Castro::construct_new_gravity() 10 0.2012 0.205 0.2067 5.64% Castro::initialize_do_advance() 10 0.1641 0.1791 0.1882 5.13% Amr::init() 1 0.1871 0.1874 0.1875 5.11% FillPatchSingleLevel 41 0.1375 0.1506 0.1834 5.00% Amr::initialInit() 1 0.1714 0.1716 0.1718 4.68% FabArray::ParallelCopy() 41 0.09377 0.1082 0.1465 3.99% Amr::InitializeInit() 1 0.06004 0.1002 0.1427 3.89% Amr::defBaseLevel() 1 0.06004 0.1002 0.1427 3.89% Castro::expand_state() 10 0.1253 0.1316 0.1387 3.78% Castro::initData() 1 0.04343 0.08306 0.1242 3.39% Castro::clean_state() 62 0.1131 0.1165 0.1196 3.26% FabArray::ParallelCopy_finish() 41 0.04453 0.06318 0.1176 3.21% Amr::FinalizeInit() 1 0.02888 0.07145 0.1118 3.05% Castro::estTimeStep() 21 0.02728 0.07113 0.1094 2.98% Castro::computeInitialDt() 2 0.001709 0.04425 0.08442 2.30% Castro::initialize_advance() 10 0.07164 0.07379 0.07515 2.05% FabArray::setVal() 143 0.06214 0.07062 0.07385 2.01% Castro::computeTemp() 63 0.06692 0.06986 0.07167 1.95% Castro::do_new_sources() 10 0.0546 0.06307 0.06473 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04925 0.05061 0.05183 1.41% Castro::reset_internal_energy(Fab) 1008 0.04893 0.05029 0.05151 1.40% FabArray::ParallelCopy_nowait() 41 0.02881 0.04491 0.05056 1.38% Castro::do_old_sources() 10 0.0347 0.04564 0.04958 1.35% StateDataPhysBCFunct::() 41 0.03597 0.04236 0.0457 1.25% StateData::FillBoundary(geom) 41 0.03588 0.04225 0.04558 1.24% Castro::normalize_species() 62 0.04008 0.04115 0.04239 1.16% Castro::construct_new_source() 50 0.02494 0.02941 0.03051 0.83% Gravity::interpolate_monopole_grav() 21 0.02581 0.02733 0.02802 0.76% Castro::post_init() 1 0.0262 0.02652 0.02673 0.73% Amr::writePlotFile() 2 0.02604 0.02619 0.02649 0.72% Castro::construct_new_gravity_source() 10 0.02006 0.02291 0.02372 0.65% Castro::apply_source_to_state() 20 0.01065 0.01476 0.01631 0.44% MultiFab::Saxpy() 20 0.01061 0.01471 0.01625 0.44% Castro::post_timestep() 10 0.01485 0.01573 0.01618 0.44% VisMF::Write(FabArray) 2 0.01227 0.01296 0.01558 0.42% FabArray::setDomainBndry() 41 0.004869 0.01043 0.01252 0.34% Castro::check_for_nan() 20 0.009892 0.01127 0.0125 0.34% MultiFab::contains_nan() 20 0.009865 0.01124 0.01248 0.34% Castro::construct_old_source() 50 0.004952 0.01031 0.01199 0.33% Castro::construct_old_gravity_source() 10 0.00491 0.01023 0.01192 0.32% Castro::Castro() 1 0.0107 0.01101 0.0119 0.32% Castro::initMFs() 1 0.006571 0.006993 0.008233 0.22% Castro::computeNewDt() 9 0.007152 0.007169 0.007184 0.20% Castro::enforce_min_density() 62 0.005751 0.006213 0.006861 0.19% AmrLevel::AmrLevel(dm) 1 0.005457 0.005714 0.006252 0.17% StateData::define() 4 0.005448 0.005704 0.006243 0.17% Castro::swap_state_time_levels() 10 0.003485 0.004647 0.004865 0.13% Castro::buildMetrics() 1 0.001661 0.001745 0.001973 0.05% Castro::post_regrid() 1 0.001537 0.001579 0.001637 0.04% Castro::finalize_do_advance() 10 0.0006471 0.001408 0.001597 0.04% Amr::InitAmr() 1 0.000274 0.0003386 0.0005829 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.777e-05 0.0003342 0.0003871 0.01% DistributionMapping::LeastUsedCPUs() 1 9.947e-06 0.0003281 0.0003809 0.01% FabArrayBase::getCPC() 41 6.728e-05 8.052e-05 9.429e-05 0.00% Castro::enforce_consistent_e() 1 7.881e-05 8.772e-05 9.327e-05 0.00% Castro::finalize_advance() 10 5.55e-05 6.623e-05 7.159e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 5.511e-05 7.11e-05 0.00% Castro::enforce_speed_limit() 62 2.026e-05 2.637e-05 3.378e-05 0.00% FabArrayBase::CPC::define() 2 2.225e-05 2.589e-05 3.338e-05 0.00% Gravity::swapTimeLevels() 10 7.274e-06 1.312e-05 1.666e-05 0.00% Castro::create_source_corrector() 10 7.188e-06 1.089e-05 1.365e-05 0.00% Gravity::set_mass_offset() 10 6.756e-06 9.691e-06 1.141e-05 0.00% Castro::FluxRegCrseInit 10 5.236e-06 9.129e-06 1.091e-05 0.00% Amr::initSubcycle() 1 8.026e-06 9.086e-06 1.002e-05 0.00% Castro::retry_advance_ctu() 10 4.03e-06 6.246e-06 7.435e-06 0.00% Castro::FluxRegFineAdd() 10 1.79e-06 2.368e-06 3.537e-06 0.00% DistributionMapping::Distribute() 1 9.69e-07 1.199e-06 1.946e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-5-g2d87a4c8ad5d) finalized