MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-8-g5acfe07a8303) initialized Starting run at 05:39:34 UTC on 2022-10-12. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-8-g5acfe07a8 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015608578 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.363127302 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345855241 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345930289 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.346989708 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.356147194 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.355774954 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340071785 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33972635 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.340747083 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340611753 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010451577 seconds Ending run at 05:39:38 UTC on 2022-10-12. Run time = 3.675392933 Run time without initialization = 3.49327365 Average number of zones advanced per microsecond: 0.750 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.675 ... 3.675 ... 3.675 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1444 2.4306 2.5342 68.95% Castro::do_advance_ctu() 10 0.03817 0.1427 0.4333 11.79% Gravity::make_radial_gravity() 21 0.3392 0.355 0.3824 10.40% Castro::initData() 1 0.03949 0.07862 0.1157 3.15% FabArray::ParallelCopy_finish() 41 0.04385 0.06169 0.1153 3.14% Castro::estTimeStep() 21 0.02743 0.06737 0.1056 2.87% FabArray::setVal() 143 0.06436 0.07124 0.07313 1.99% Castro::reset_internal_energy(Fab) 1008 0.04805 0.0501 0.05164 1.41% FabArray::ParallelCopy_nowait() 41 0.02792 0.04483 0.0508 1.38% StateData::FillBoundary(geom) 41 0.0359 0.04269 0.0467 1.27% Castro::normalize_species() 62 0.03999 0.04142 0.04232 1.15% FillPatchIterator::Initialize 41 0.02422 0.03621 0.0403 1.10% Gravity::interpolate_monopole_grav() 21 0.0267 0.0275 0.02783 0.76% Castro::construct_new_gravity_source() 10 0.02028 0.0229 0.02426 0.66% Castro::expand_state() 10 0.009926 0.01834 0.02203 0.60% Castro::computeTemp() 63 0.01797 0.01927 0.02042 0.56% Castro::initialize_do_advance() 10 0.009628 0.01753 0.01948 0.53% VisMF::Write(FabArray) 2 0.01279 0.0136 0.01744 0.47% MultiFab::Saxpy() 20 0.008602 0.01439 0.01635 0.44% Amr::writePlotFile() 2 0.008826 0.01282 0.01357 0.37% MultiFab::contains_nan() 20 0.009636 0.01102 0.01294 0.35% Gravity::get_new_grav_vector() 11 0.007908 0.01156 0.01281 0.35% FabArray::setDomainBndry() 41 0.004765 0.01041 0.01256 0.34% Castro::construct_old_gravity_source() 10 0.004922 0.01003 0.01173 0.32% Castro::initialize_advance() 10 0.01053 0.01082 0.01136 0.31% Gravity::get_old_grav_vector() 10 0.005624 0.009545 0.01118 0.30% main() 1 0.006638 0.006896 0.007186 0.20% Castro::construct_new_source() 50 0.004849 0.006518 0.007108 0.19% Castro::enforce_min_density() 62 0.00533 0.006096 0.006863 0.19% Castro::initMFs() 1 0.006761 0.006795 0.006848 0.19% StateData::define() 4 0.005583 0.005616 0.005664 0.15% Castro::swap_state_time_levels() 10 0.00332 0.00433 0.004673 0.13% Amr::coarseTimeStep() 10 0.0009067 0.001228 0.00183 0.05% Castro::buildMetrics() 1 0.001584 0.001603 0.001621 0.04% Castro::finalize_do_advance() 10 0.0008083 0.001408 0.001564 0.04% Amr::InitAmr() 1 0.000259 0.0002823 0.0004056 0.01% Amr::timeStep() 10 0.0001723 0.0002196 0.0003622 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000294 0.0003105 0.0003325 0.01% Castro::clean_state() 62 0.0001517 0.0001766 0.0002141 0.01% DistributionMapping::LeastUsedCPUs() 1 7.372e-06 0.0001306 0.0001509 0.00% StateDataPhysBCFunct::() 41 0.0001004 0.0001165 0.0001261 0.00% Castro::Castro() 1 5.975e-05 7.944e-05 0.0001198 0.00% FabArray::ParallelCopy() 41 6.482e-05 8.747e-05 0.0001079 0.00% Castro::enforce_consistent_e() 1 8.235e-05 9.121e-05 0.0001005 0.00% Castro::construct_old_source() 50 4.055e-05 7.499e-05 9.557e-05 0.00% Castro::do_new_sources() 10 4.452e-05 7.176e-05 9.262e-05 0.00% Castro::do_old_sources() 10 3.666e-05 6.68e-05 8.525e-05 0.00% FillPatchSingleLevel 41 6.417e-05 7.358e-05 7.915e-05 0.00% Amr::writeSmallPlotFile() 1 2.433e-05 5.785e-05 7.158e-05 0.00% Amr::FinalizeInit() 1 3.935e-06 1.274e-05 7.005e-05 0.00% FabArrayBase::getCPC() 41 4.739e-05 5.84e-05 6.931e-05 0.00% Castro::subcycle_advance_ctu() 10 4.159e-05 5.746e-05 6.837e-05 0.00% Castro::construct_old_gravity() 10 3.755e-05 5.397e-05 6.744e-05 0.00% Castro::apply_source_to_state() 20 3.618e-05 5.032e-05 6.568e-05 0.00% Castro::finalize_advance() 10 4.909e-05 5.443e-05 5.958e-05 0.00% Castro::construct_new_gravity() 10 3.547e-05 4.603e-05 5.567e-05 0.00% Castro::advance() 10 3.795e-05 4.52e-05 5.057e-05 0.00% FabArrayBase::CPC::define() 2 2.199e-05 2.62e-05 4.393e-05 0.00% Amr::defBaseLevel() 1 2.484e-05 2.954e-05 3.704e-05 0.00% Castro::enforce_speed_limit() 62 2.083e-05 2.768e-05 3.069e-05 0.00% Castro::check_for_nan() 20 2.14e-05 2.51e-05 2.792e-05 0.00% Castro::post_timestep() 10 1.349e-05 2.102e-05 2.641e-05 0.00% Gravity::swapTimeLevels() 10 7.452e-06 1.276e-05 1.756e-05 0.00% Castro::create_source_corrector() 10 7.309e-06 1.059e-05 1.465e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.225e-06 9.586e-06 1.246e-05 0.00% Castro::post_init() 1 3.068e-06 5.642e-06 1.24e-05 0.00% Gravity::set_mass_offset() 10 6.861e-06 9.784e-06 1.171e-05 0.00% Castro::computeNewDt() 9 7.819e-06 9.641e-06 1.122e-05 0.00% Castro::FluxRegCrseInit 10 5.894e-06 8.474e-06 1.088e-05 0.00% Amr::initSubcycle() 1 7.991e-06 8.596e-06 9.246e-06 0.00% Castro::retry_advance_ctu() 10 3.778e-06 5.975e-06 7.964e-06 0.00% Amr::InitializeInit() 1 1.827e-06 2.823e-06 5.811e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.46e-06 4.128e-06 5.332e-06 0.00% Castro::computeInitialDt() 2 3.294e-06 3.762e-06 4.379e-06 0.00% Castro::post_regrid() 1 1.868e-06 2.913e-06 4.371e-06 0.00% Castro::FluxRegFineAdd() 10 1.837e-06 2.233e-06 3.155e-06 0.00% Amr::init() 1 1.732e-06 2.027e-06 2.276e-06 0.00% Amr::initialInit() 1 1.075e-06 1.356e-06 1.684e-06 0.00% DistributionMapping::Distribute() 1 9.14e-07 1.017e-06 1.186e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.675 3.675 3.675 100.00% Amr::coarseTimeStep() 10 3.476 3.476 3.476 94.57% Amr::timeStep() 10 3.466 3.466 3.467 94.32% Castro::advance() 10 3.45 3.45 3.451 93.88% Castro::subcycle_advance_ctu() 10 3.376 3.377 3.38 91.96% Castro::do_advance_ctu() 10 3.376 3.377 3.38 91.96% Castro::construct_ctu_hydro_source() 10 2.144 2.431 2.534 68.95% Gravity::make_radial_gravity() 21 0.3392 0.355 0.3824 10.40% Gravity::get_new_grav_vector() 11 0.2265 0.2321 0.2341 6.37% Castro::construct_old_gravity() 10 0.1996 0.2129 0.2334 6.35% Gravity::get_old_grav_vector() 10 0.1987 0.2122 0.2328 6.33% Castro::construct_new_gravity() 10 0.2023 0.207 0.2088 5.68% FillPatchIterator::Initialize 41 0.1872 0.1962 0.2086 5.68% Castro::initialize_do_advance() 10 0.1613 0.1793 0.1892 5.15% Amr::init() 1 0.1816 0.1817 0.1817 4.94% FillPatchSingleLevel 41 0.1352 0.1496 0.1796 4.89% Amr::initialInit() 1 0.1656 0.1658 0.166 4.52% FabArray::ParallelCopy() 41 0.09196 0.1067 0.1434 3.90% Castro::expand_state() 10 0.1207 0.1314 0.1395 3.79% Amr::InitializeInit() 1 0.06103 0.1002 0.1375 3.74% Amr::defBaseLevel() 1 0.06103 0.1002 0.1375 3.74% Castro::initData() 1 0.04361 0.08275 0.1199 3.26% Castro::clean_state() 62 0.1109 0.1165 0.1193 3.24% FabArray::ParallelCopy_finish() 41 0.04385 0.06169 0.1153 3.14% Castro::estTimeStep() 21 0.02743 0.06737 0.1056 2.87% Amr::FinalizeInit() 1 0.02813 0.06561 0.1049 2.85% Castro::computeInitialDt() 2 0.001732 0.03907 0.07824 2.13% Castro::initialize_advance() 10 0.06991 0.07306 0.07482 2.04% FabArray::setVal() 143 0.06436 0.07124 0.07313 1.99% Castro::computeTemp() 63 0.06634 0.06968 0.07239 1.97% Castro::do_new_sources() 10 0.05445 0.0631 0.06474 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04837 0.05041 0.05197 1.41% Castro::reset_internal_energy(Fab) 1008 0.04805 0.0501 0.05164 1.41% FabArray::ParallelCopy_nowait() 41 0.02802 0.04491 0.05089 1.38% Castro::do_old_sources() 10 0.03278 0.04504 0.04873 1.33% StateDataPhysBCFunct::() 41 0.03601 0.04281 0.04682 1.27% StateData::FillBoundary(geom) 41 0.0359 0.04269 0.0467 1.27% Castro::normalize_species() 62 0.03999 0.04142 0.04232 1.15% Castro::construct_new_source() 50 0.02513 0.02942 0.03064 0.83% Gravity::interpolate_monopole_grav() 21 0.0267 0.0275 0.02783 0.76% Amr::writePlotFile() 2 0.02625 0.02642 0.02668 0.73% Castro::post_init() 1 0.0257 0.02588 0.02607 0.71% Castro::construct_new_gravity_source() 10 0.02028 0.0229 0.02426 0.66% VisMF::Write(FabArray) 2 0.01279 0.0136 0.01744 0.47% Castro::apply_source_to_state() 20 0.00865 0.01444 0.01642 0.45% MultiFab::Saxpy() 20 0.008602 0.01439 0.01635 0.44% Castro::post_timestep() 10 0.01557 0.01586 0.01605 0.44% Castro::check_for_nan() 20 0.009659 0.01105 0.01297 0.35% MultiFab::contains_nan() 20 0.009636 0.01102 0.01294 0.35% FabArray::setDomainBndry() 41 0.004765 0.01041 0.01256 0.34% Castro::construct_old_source() 50 0.004965 0.0101 0.01181 0.32% Castro::Castro() 1 0.01159 0.01164 0.01173 0.32% Castro::construct_old_gravity_source() 10 0.004922 0.01003 0.01173 0.32% Castro::computeNewDt() 9 0.007058 0.007064 0.007076 0.19% Castro::enforce_min_density() 62 0.00533 0.006096 0.006863 0.19% Castro::initMFs() 1 0.006761 0.006795 0.006848 0.19% AmrLevel::AmrLevel(dm) 1 0.005595 0.005625 0.005671 0.15% StateData::define() 4 0.005583 0.005616 0.005664 0.15% Castro::swap_state_time_levels() 10 0.00332 0.00433 0.004673 0.13% Castro::buildMetrics() 1 0.001713 0.001733 0.001753 0.05% Castro::post_regrid() 1 0.001516 0.001589 0.001647 0.04% Castro::finalize_do_advance() 10 0.0008083 0.001408 0.001564 0.04% Amr::InitAmr() 1 0.0002681 0.0002909 0.0004139 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.191e-05 0.0001357 0.0001573 0.00% DistributionMapping::LeastUsedCPUs() 1 7.372e-06 0.0001306 0.0001509 0.00% FabArrayBase::getCPC() 41 6.991e-05 8.459e-05 0.000106 0.00% Castro::enforce_consistent_e() 1 8.235e-05 9.121e-05 0.0001005 0.00% Castro::finalize_advance() 10 5.717e-05 6.514e-05 7.342e-05 0.00% Amr::writeSmallPlotFile() 1 2.433e-05 5.785e-05 7.158e-05 0.00% FabArrayBase::CPC::define() 2 2.199e-05 2.62e-05 4.393e-05 0.00% Castro::enforce_speed_limit() 62 2.083e-05 2.768e-05 3.069e-05 0.00% Gravity::swapTimeLevels() 10 7.452e-06 1.276e-05 1.756e-05 0.00% Castro::create_source_corrector() 10 7.309e-06 1.059e-05 1.465e-05 0.00% Gravity::set_mass_offset() 10 6.861e-06 9.784e-06 1.171e-05 0.00% Castro::FluxRegCrseInit 10 5.894e-06 8.474e-06 1.088e-05 0.00% Amr::initSubcycle() 1 7.991e-06 8.596e-06 9.246e-06 0.00% Castro::retry_advance_ctu() 10 3.778e-06 5.975e-06 7.964e-06 0.00% Castro::FluxRegFineAdd() 10 1.837e-06 2.233e-06 3.155e-06 0.00% DistributionMapping::Distribute() 1 9.14e-07 1.017e-06 1.186e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-8-g5acfe07a8303) finalized