MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-10-gf84c7a8f77d6) initialized Starting run at 05:39:41 UTC on 2022-10-13. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-10-gf84c7a8f7 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015293089 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.365734933 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.343303754 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342814657 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342808334 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353664575 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351573266 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339432656 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337880206 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337221831 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340043105 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010427003 seconds Ending run at 05:39:44 UTC on 2022-10-13. Run time = 3.658499185 Run time without initialization = 3.472494485 Average number of zones advanced per microsecond: 0.755 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.656 ... 3.658 ... 3.659 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0968 2.4095 2.5126 68.68% Castro::do_advance_ctu() 10 0.04349 0.1494 0.4657 12.73% Gravity::make_radial_gravity() 21 0.3379 0.3519 0.3772 10.31% FabArray::ParallelCopy_finish() 41 0.04306 0.06391 0.126 3.44% Castro::initData() 1 0.03967 0.07984 0.1204 3.29% Castro::estTimeStep() 21 0.02751 0.07064 0.1089 2.98% FabArray::setVal() 143 0.06036 0.06855 0.07113 1.94% Castro::reset_internal_energy(Fab) 1008 0.04474 0.04972 0.0519 1.42% FabArray::ParallelCopy_nowait() 41 0.02785 0.04456 0.05026 1.37% StateData::FillBoundary(geom) 41 0.0364 0.04248 0.04661 1.27% Castro::normalize_species() 62 0.03964 0.04132 0.04237 1.16% FillPatchIterator::Initialize 41 0.02349 0.03583 0.04044 1.11% Gravity::interpolate_monopole_grav() 21 0.0258 0.02728 0.02785 0.76% Castro::construct_new_gravity_source() 10 0.02004 0.02278 0.02376 0.65% Castro::expand_state() 10 0.009829 0.01805 0.02169 0.59% Castro::computeTemp() 63 0.01693 0.01906 0.01984 0.54% Castro::initialize_do_advance() 10 0.009576 0.0173 0.01941 0.53% MultiFab::Saxpy() 20 0.008524 0.01434 0.01631 0.45% VisMF::Write(FabArray) 2 0.01254 0.01324 0.01567 0.43% Amr::writePlotFile() 2 0.01025 0.01261 0.01314 0.36% Gravity::get_new_grav_vector() 11 0.007586 0.01145 0.01296 0.35% FabArray::setDomainBndry() 41 0.004923 0.01048 0.01256 0.34% MultiFab::contains_nan() 20 0.009046 0.011 0.01225 0.33% Castro::construct_old_gravity_source() 10 0.004862 0.01003 0.01153 0.32% Gravity::get_old_grav_vector() 10 0.005513 0.009282 0.0112 0.31% Castro::initialize_advance() 10 0.006508 0.009884 0.0105 0.29% Castro::initMFs() 1 0.00657 0.007044 0.007816 0.21% Castro::construct_new_source() 50 0.004878 0.006514 0.007234 0.20% main() 1 0.004386 0.006442 0.006917 0.19% Castro::enforce_min_density() 62 0.00522 0.00611 0.006568 0.18% StateData::define() 4 0.005588 0.005975 0.006358 0.17% Castro::swap_state_time_levels() 10 0.003278 0.004278 0.004647 0.13% Amr::coarseTimeStep() 10 0.0008901 0.001647 0.003706 0.10% Castro::buildMetrics() 1 0.001583 0.001694 0.001821 0.05% Castro::finalize_do_advance() 10 0.0006461 0.001462 0.001711 0.05% Amr::InitAmr() 1 0.0002554 0.0003003 0.000455 0.01% Amr::timeStep() 10 0.00017 0.0002293 0.000389 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002988 0.0003108 0.0003241 0.01% DistributionMapping::LeastUsedCPUs() 1 6.893e-06 0.0001643 0.0002076 0.01% Castro::clean_state() 62 0.0001452 0.000181 0.0002069 0.01% StateDataPhysBCFunct::() 41 9.556e-05 0.0001176 0.0001286 0.00% Castro::enforce_consistent_e() 1 8.039e-05 9.134e-05 0.0001026 0.00% FabArray::ParallelCopy() 41 8.125e-05 8.882e-05 9.772e-05 0.00% Castro::construct_old_source() 50 3.692e-05 7.503e-05 9.648e-05 0.00% Castro::do_new_sources() 10 4.743e-05 7.616e-05 8.979e-05 0.00% Castro::Castro() 1 5.104e-05 6.225e-05 8.366e-05 0.00% Castro::apply_source_to_state() 20 4.168e-05 5.761e-05 8.182e-05 0.00% Amr::FinalizeInit() 1 3.774e-06 1.391e-05 8.124e-05 0.00% Castro::do_old_sources() 10 4.511e-05 6.9e-05 7.887e-05 0.00% Amr::writeSmallPlotFile() 1 2.518e-05 6.224e-05 7.85e-05 0.00% FillPatchSingleLevel 41 6.513e-05 7.349e-05 7.813e-05 0.00% Castro::finalize_advance() 10 5.026e-05 5.672e-05 7.201e-05 0.00% Castro::subcycle_advance_ctu() 10 4.578e-05 5.531e-05 6.953e-05 0.00% FabArrayBase::getCPC() 41 5.03e-05 5.969e-05 6.707e-05 0.00% Castro::construct_old_gravity() 10 3.973e-05 5.403e-05 6.526e-05 0.00% Castro::advance() 10 3.336e-05 4.801e-05 5.443e-05 0.00% Castro::construct_new_gravity() 10 3.686e-05 4.493e-05 5.063e-05 0.00% Amr::defBaseLevel() 1 2.217e-05 2.624e-05 3.375e-05 0.00% Castro::post_timestep() 10 1.599e-05 2.194e-05 3.345e-05 0.00% FabArrayBase::CPC::define() 2 2.398e-05 2.663e-05 3.27e-05 0.00% Castro::enforce_speed_limit() 62 2.616e-05 2.971e-05 3.198e-05 0.00% Castro::check_for_nan() 20 1.942e-05 2.487e-05 2.694e-05 0.00% Amr::initSubcycle() 1 8.274e-06 1.111e-05 2.382e-05 0.00% Gravity::swapTimeLevels() 10 7.531e-06 1.41e-05 2.195e-05 0.00% Castro::create_source_corrector() 10 6.841e-06 1.134e-05 1.394e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.288e-06 9.983e-06 1.321e-05 0.00% Castro::computeNewDt() 9 8.386e-06 1.08e-05 1.312e-05 0.00% Gravity::set_mass_offset() 10 6.899e-06 9.909e-06 1.172e-05 0.00% Castro::FluxRegCrseInit 10 5.888e-06 8.376e-06 1.091e-05 0.00% Castro::retry_advance_ctu() 10 3.697e-06 5.693e-06 7.472e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.035e-06 4.565e-06 6.074e-06 0.00% Amr::InitializeInit() 1 1.978e-06 2.58e-06 4.947e-06 0.00% Castro::post_regrid() 1 1.939e-06 2.704e-06 4.242e-06 0.00% Castro::post_init() 1 3.186e-06 3.702e-06 4.055e-06 0.00% Castro::computeInitialDt() 2 3.308e-06 3.578e-06 3.908e-06 0.00% Amr::init() 1 1.746e-06 2.139e-06 2.805e-06 0.00% Castro::FluxRegFineAdd() 10 1.869e-06 2.199e-06 2.508e-06 0.00% Amr::initialInit() 1 1.143e-06 1.485e-06 1.967e-06 0.00% DistributionMapping::Distribute() 1 9.56e-07 1.057e-06 1.146e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.656 3.658 3.659 100.00% Amr::coarseTimeStep() 10 3.455 3.455 3.455 94.44% Amr::timeStep() 10 3.444 3.446 3.446 94.20% Castro::advance() 10 3.429 3.43 3.43 93.75% Castro::subcycle_advance_ctu() 10 3.356 3.359 3.367 92.03% Castro::do_advance_ctu() 10 3.356 3.359 3.367 92.03% Castro::construct_ctu_hydro_source() 10 2.097 2.409 2.513 68.68% Gravity::make_radial_gravity() 21 0.3379 0.3519 0.3772 10.31% Gravity::get_new_grav_vector() 11 0.2245 0.2294 0.2313 6.32% Castro::construct_old_gravity() 10 0.1993 0.2118 0.2298 6.28% Gravity::get_old_grav_vector() 10 0.1984 0.211 0.2292 6.27% FillPatchIterator::Initialize 41 0.1864 0.1976 0.2199 6.01% Castro::construct_new_gravity() 10 0.2006 0.2046 0.2063 5.64% FillPatchSingleLevel 41 0.1349 0.1513 0.1915 5.24% Castro::initialize_do_advance() 10 0.1683 0.1801 0.1893 5.17% Amr::init() 1 0.1854 0.1855 0.1856 5.07% Amr::initialInit() 1 0.17 0.1702 0.1705 4.66% FabArray::ParallelCopy() 41 0.09242 0.1087 0.1541 4.21% Amr::InitializeInit() 1 0.06024 0.101 0.1424 3.89% Amr::defBaseLevel() 1 0.06023 0.101 0.1424 3.89% Castro::expand_state() 10 0.1235 0.1324 0.1398 3.82% FabArray::ParallelCopy_finish() 41 0.04306 0.06391 0.126 3.44% Castro::initData() 1 0.04392 0.08378 0.124 3.39% Castro::clean_state() 62 0.107 0.1158 0.1189 3.25% Amr::FinalizeInit() 1 0.02777 0.06921 0.1099 3.00% Castro::estTimeStep() 21 0.02751 0.07064 0.1089 2.98% Castro::computeInitialDt() 2 0.001593 0.04303 0.08382 2.29% Castro::initialize_advance() 10 0.06184 0.07058 0.07335 2.00% Castro::computeTemp() 63 0.06197 0.06909 0.07207 1.97% FabArray::setVal() 143 0.06036 0.06855 0.07113 1.94% Castro::do_new_sources() 10 0.05391 0.0629 0.06454 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04504 0.05003 0.05223 1.43% Castro::reset_internal_energy(Fab) 1008 0.04474 0.04972 0.0519 1.42% FabArray::ParallelCopy_nowait() 41 0.02794 0.04465 0.05034 1.38% Castro::do_old_sources() 10 0.03205 0.04489 0.04858 1.33% StateDataPhysBCFunct::() 41 0.03649 0.04259 0.04673 1.28% StateData::FillBoundary(geom) 41 0.0364 0.04248 0.04661 1.27% Castro::normalize_species() 62 0.03964 0.04132 0.04237 1.16% Castro::construct_new_source() 50 0.02492 0.02929 0.03029 0.83% Gravity::interpolate_monopole_grav() 21 0.0258 0.02728 0.02785 0.76% Amr::writePlotFile() 2 0.02562 0.02585 0.02606 0.71% Castro::post_init() 1 0.02525 0.0255 0.02571 0.70% Castro::construct_new_gravity_source() 10 0.02004 0.02278 0.02376 0.65% Castro::apply_source_to_state() 20 0.008572 0.01439 0.01639 0.45% MultiFab::Saxpy() 20 0.008524 0.01434 0.01631 0.45% Castro::post_timestep() 10 0.01442 0.01568 0.01627 0.44% VisMF::Write(FabArray) 2 0.01254 0.01324 0.01567 0.43% FabArray::setDomainBndry() 41 0.004923 0.01048 0.01256 0.34% Castro::check_for_nan() 20 0.009071 0.01103 0.01228 0.34% MultiFab::contains_nan() 20 0.009046 0.011 0.01225 0.33% Castro::Castro() 1 0.01033 0.01101 0.01186 0.32% Castro::construct_old_source() 50 0.004899 0.0101 0.01161 0.32% Castro::construct_old_gravity_source() 10 0.004862 0.01003 0.01153 0.32% Castro::initMFs() 1 0.00657 0.007044 0.007816 0.21% Castro::computeNewDt() 9 0.007038 0.007057 0.007071 0.19% Castro::enforce_min_density() 62 0.00522 0.00611 0.006568 0.18% AmrLevel::AmrLevel(dm) 1 0.0056 0.005985 0.006367 0.17% StateData::define() 4 0.005588 0.005975 0.006358 0.17% Castro::swap_state_time_levels() 10 0.003278 0.004278 0.004647 0.13% Castro::buildMetrics() 1 0.001696 0.001824 0.001965 0.05% Castro::finalize_do_advance() 10 0.0006461 0.001462 0.001711 0.05% Castro::post_regrid() 1 0.001513 0.001591 0.001637 0.04% Amr::InitAmr() 1 0.0002644 0.0003114 0.0004648 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.248e-05 0.00017 0.0002146 0.01% DistributionMapping::LeastUsedCPUs() 1 6.893e-06 0.0001643 0.0002076 0.01% Castro::enforce_consistent_e() 1 8.039e-05 9.134e-05 0.0001026 0.00% FabArrayBase::getCPC() 41 7.833e-05 8.633e-05 9.383e-05 0.00% Castro::finalize_advance() 10 5.957e-05 6.73e-05 8.404e-05 0.00% Amr::writeSmallPlotFile() 1 2.518e-05 6.224e-05 7.85e-05 0.00% FabArrayBase::CPC::define() 2 2.398e-05 2.663e-05 3.27e-05 0.00% Castro::enforce_speed_limit() 62 2.616e-05 2.971e-05 3.198e-05 0.00% Amr::initSubcycle() 1 8.274e-06 1.111e-05 2.382e-05 0.00% Gravity::swapTimeLevels() 10 7.531e-06 1.41e-05 2.195e-05 0.00% Castro::create_source_corrector() 10 6.841e-06 1.134e-05 1.394e-05 0.00% Gravity::set_mass_offset() 10 6.899e-06 9.909e-06 1.172e-05 0.00% Castro::FluxRegCrseInit 10 5.888e-06 8.376e-06 1.091e-05 0.00% Castro::retry_advance_ctu() 10 3.697e-06 5.693e-06 7.472e-06 0.00% Castro::FluxRegFineAdd() 10 1.869e-06 2.199e-06 2.508e-06 0.00% DistributionMapping::Distribute() 1 9.56e-07 1.057e-06 1.146e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-10-gf84c7a8f77d6) finalized