MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-10-gf84c7a8f77d6) initialized Starting run at 05:39:42 UTC on 2022-10-14. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-10-gf84c7a8f7 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016260655 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.379618507 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.346755117 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344177667 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344903309 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355334103 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.3547987 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339880383 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340543896 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.340200455 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.341108316 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01029815 seconds Ending run at 05:39:46 UTC on 2022-10-14. Run time = 3.686598694 Run time without initialization = 3.505713983 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.686 ... 3.686 ... 3.687 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1537 2.4350 2.5334 68.72% Castro::do_advance_ctu() 10 0.05503 0.1542 0.4382 11.89% Gravity::make_radial_gravity() 21 0.3381 0.3509 0.3782 10.26% FabArray::ParallelCopy_finish() 41 0.04323 0.06484 0.1248 3.39% Castro::initData() 1 0.04356 0.08395 0.116 3.15% Castro::estTimeStep() 21 0.02685 0.05944 0.1012 2.74% FabArray::setVal() 143 0.06103 0.06901 0.07087 1.92% Castro::reset_internal_energy(Fab) 1008 0.04651 0.05014 0.05172 1.40% FabArray::ParallelCopy_nowait() 41 0.02782 0.04484 0.05034 1.37% StateData::FillBoundary(geom) 41 0.03586 0.04245 0.04605 1.25% Castro::normalize_species() 62 0.04029 0.04123 0.04203 1.14% FillPatchIterator::Initialize 41 0.02366 0.03591 0.04027 1.09% Gravity::interpolate_monopole_grav() 21 0.02633 0.02739 0.02784 0.76% Castro::construct_new_gravity_source() 10 0.02018 0.02286 0.02429 0.66% Castro::expand_state() 10 0.009733 0.01871 0.02228 0.60% Castro::computeTemp() 63 0.01761 0.01929 0.01999 0.54% Castro::initialize_do_advance() 10 0.009366 0.01735 0.01904 0.52% VisMF::Write(FabArray) 2 0.01244 0.01336 0.01721 0.47% MultiFab::Saxpy() 20 0.008602 0.01437 0.0163 0.44% Amr::writePlotFile() 2 0.009578 0.01286 0.01374 0.37% Gravity::get_new_grav_vector() 11 0.007557 0.01146 0.01287 0.35% FabArray::setDomainBndry() 41 0.0049 0.01051 0.01264 0.34% Castro::construct_old_gravity_source() 10 0.004866 0.01002 0.01192 0.32% MultiFab::contains_nan() 20 0.009118 0.01079 0.01172 0.32% Castro::initialize_advance() 10 0.009139 0.01055 0.01146 0.31% Gravity::get_old_grav_vector() 10 0.005526 0.009436 0.01088 0.30% Castro::initMFs() 1 0.006511 0.007651 0.0101 0.27% StateData::define() 4 0.005655 0.006541 0.008258 0.22% main() 1 0.006891 0.007145 0.00737 0.20% Castro::construct_new_source() 50 0.004894 0.006522 0.007076 0.19% Castro::enforce_min_density() 62 0.005335 0.006116 0.006617 0.18% Castro::swap_state_time_levels() 10 0.003255 0.004259 0.004596 0.12% Amr::coarseTimeStep() 10 0.001004 0.001413 0.002625 0.07% Castro::buildMetrics() 1 0.001551 0.001812 0.00234 0.06% Castro::finalize_do_advance() 10 0.0006194 0.001639 0.001985 0.05% Amr::InitAmr() 1 0.0002905 0.0003643 0.0005088 0.01% Amr::timeStep() 10 0.0001736 0.0002276 0.0004425 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002781 0.0003042 0.0003186 0.01% DistributionMapping::LeastUsedCPUs() 1 6.069e-06 0.0001859 0.0002714 0.01% Castro::clean_state() 62 0.0001192 0.000159 0.0001731 0.00% StateDataPhysBCFunct::() 41 8.326e-05 0.0001142 0.0001316 0.00% Castro::enforce_consistent_e() 1 7.969e-05 8.652e-05 9.886e-05 0.00% Castro::Castro() 1 4.853e-05 6.968e-05 9.712e-05 0.00% Castro::construct_old_source() 50 2.556e-05 7.344e-05 9.454e-05 0.00% FabArray::ParallelCopy() 41 6.591e-05 8.368e-05 9.096e-05 0.00% Castro::subcycle_advance_ctu() 10 3.084e-05 5.853e-05 7.955e-05 0.00% Castro::do_new_sources() 10 4.111e-05 6.713e-05 7.913e-05 0.00% FillPatchSingleLevel 41 5.148e-05 6.899e-05 7.801e-05 0.00% Castro::do_old_sources() 10 3.572e-05 6.551e-05 7.709e-05 0.00% Amr::writeSmallPlotFile() 1 3.169e-05 6.158e-05 7.108e-05 0.00% Amr::FinalizeInit() 1 4.083e-06 1.286e-05 7.046e-05 0.00% Castro::advance() 10 2.931e-05 4.675e-05 6.797e-05 0.00% Castro::apply_source_to_state() 20 2.485e-05 5.098e-05 6.473e-05 0.00% Castro::construct_old_gravity() 10 3.601e-05 5.453e-05 6.431e-05 0.00% FabArrayBase::getCPC() 41 4.494e-05 5.191e-05 6.167e-05 0.00% Castro::finalize_advance() 10 4.741e-05 5.56e-05 6.018e-05 0.00% Castro::construct_new_gravity() 10 3.505e-05 4.411e-05 4.918e-05 0.00% Amr::defBaseLevel() 1 2.524e-05 3.09e-05 4.012e-05 0.00% FabArrayBase::CPC::define() 2 2.418e-05 2.672e-05 3.794e-05 0.00% Castro::enforce_speed_limit() 62 1.978e-05 2.737e-05 3.535e-05 0.00% Castro::check_for_nan() 20 1.908e-05 2.486e-05 3.133e-05 0.00% Castro::post_timestep() 10 1.317e-05 2.024e-05 2.62e-05 0.00% Gravity::swapTimeLevels() 10 6.325e-06 1.242e-05 1.599e-05 0.00% Amr::initSubcycle() 1 8.196e-06 1.05e-05 1.493e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.474e-06 1.056e-05 1.385e-05 0.00% Castro::computeNewDt() 9 7.626e-06 1.024e-05 1.236e-05 0.00% Castro::create_source_corrector() 10 6.432e-06 1.003e-05 1.218e-05 0.00% Castro::FluxRegCrseInit 10 5.062e-06 8.452e-06 1.18e-05 0.00% Gravity::set_mass_offset() 10 6.791e-06 9.438e-06 1.116e-05 0.00% Castro::retry_advance_ctu() 10 3.426e-06 5.976e-06 7.922e-06 0.00% Amr::InitializeInit() 1 1.952e-06 3.24e-06 6.813e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.876e-06 4.772e-06 6.809e-06 0.00% Castro::computeInitialDt() 2 3.452e-06 3.962e-06 5.182e-06 0.00% Castro::post_init() 1 3.02e-06 3.573e-06 4.425e-06 0.00% Castro::post_regrid() 1 1.783e-06 2.823e-06 3.779e-06 0.00% Castro::FluxRegFineAdd() 10 1.816e-06 2.463e-06 3.302e-06 0.00% Amr::init() 1 1.884e-06 2.209e-06 2.374e-06 0.00% Amr::initialInit() 1 1.311e-06 1.541e-06 1.839e-06 0.00% DistributionMapping::Distribute() 1 9.55e-07 1.188e-06 1.438e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.686 3.686 3.687 100.00% Amr::coarseTimeStep() 10 3.488 3.488 3.488 94.61% Amr::timeStep() 10 3.477 3.479 3.479 94.37% Castro::advance() 10 3.461 3.462 3.463 93.93% Castro::subcycle_advance_ctu() 10 3.389 3.39 3.395 92.08% Castro::do_advance_ctu() 10 3.389 3.39 3.395 92.08% Castro::construct_ctu_hydro_source() 10 2.154 2.435 2.533 68.72% Gravity::make_radial_gravity() 21 0.3381 0.3509 0.3782 10.26% Gravity::get_new_grav_vector() 11 0.2246 0.2302 0.2327 6.31% Castro::construct_old_gravity() 10 0.199 0.2107 0.2308 6.26% Gravity::get_old_grav_vector() 10 0.1981 0.21 0.2303 6.25% FillPatchIterator::Initialize 41 0.1917 0.1989 0.218 5.91% Castro::construct_new_gravity() 10 0.201 0.205 0.2068 5.61% Castro::initialize_do_advance() 10 0.1673 0.1818 0.1901 5.16% FillPatchSingleLevel 41 0.1393 0.1525 0.1895 5.14% Amr::init() 1 0.1802 0.1804 0.1805 4.89% Amr::initialInit() 1 0.1639 0.1645 0.1649 4.47% FabArray::ParallelCopy() 41 0.0936 0.1098 0.1528 4.14% Castro::expand_state() 10 0.1249 0.1341 0.14 3.80% Amr::InitializeInit() 1 0.06427 0.106 0.1362 3.70% Amr::defBaseLevel() 1 0.06426 0.106 0.1362 3.70% FabArray::ParallelCopy_finish() 41 0.04323 0.06484 0.1248 3.39% Castro::initData() 1 0.04783 0.08779 0.1201 3.26% Castro::clean_state() 62 0.1091 0.1163 0.1184 3.21% Castro::estTimeStep() 21 0.02685 0.05944 0.1012 2.74% Amr::FinalizeInit() 1 0.02807 0.05855 0.09965 2.70% Castro::initialize_advance() 10 0.06671 0.07216 0.07373 2.00% Castro::computeInitialDt() 2 0.001697 0.03187 0.07353 1.99% Castro::computeTemp() 63 0.0644 0.06974 0.07191 1.95% FabArray::setVal() 143 0.06103 0.06901 0.07087 1.92% Castro::do_new_sources() 10 0.05358 0.06302 0.06464 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04679 0.05045 0.05203 1.41% Castro::reset_internal_energy(Fab) 1008 0.04651 0.05014 0.05172 1.40% FabArray::ParallelCopy_nowait() 41 0.0279 0.04491 0.05042 1.37% Castro::do_old_sources() 10 0.0325 0.04508 0.0489 1.33% StateDataPhysBCFunct::() 41 0.03595 0.04256 0.04616 1.25% StateData::FillBoundary(geom) 41 0.03586 0.04245 0.04605 1.25% Castro::normalize_species() 62 0.04029 0.04123 0.04203 1.14% Castro::construct_new_source() 50 0.02508 0.02938 0.03038 0.82% Gravity::interpolate_monopole_grav() 21 0.02633 0.02739 0.02784 0.76% Amr::writePlotFile() 2 0.02569 0.02622 0.02678 0.73% Castro::post_init() 1 0.02531 0.02599 0.02658 0.72% Castro::construct_new_gravity_source() 10 0.02018 0.02286 0.02429 0.66% VisMF::Write(FabArray) 2 0.01244 0.01336 0.01721 0.47% Castro::apply_source_to_state() 20 0.008627 0.01443 0.01636 0.44% MultiFab::Saxpy() 20 0.008602 0.01437 0.0163 0.44% Castro::post_timestep() 10 0.01569 0.01589 0.01605 0.44% Castro::Castro() 1 0.01011 0.01141 0.01425 0.39% FabArray::setDomainBndry() 41 0.0049 0.01051 0.01264 0.34% Castro::construct_old_source() 50 0.004892 0.0101 0.01201 0.33% Castro::construct_old_gravity_source() 10 0.004866 0.01002 0.01192 0.32% Castro::check_for_nan() 20 0.009137 0.01082 0.01175 0.32% MultiFab::contains_nan() 20 0.009118 0.01079 0.01172 0.32% Castro::initMFs() 1 0.006511 0.007651 0.0101 0.27% AmrLevel::AmrLevel(dm) 1 0.005668 0.006552 0.008272 0.22% StateData::define() 4 0.005655 0.006541 0.008258 0.22% Castro::computeNewDt() 9 0.00725 0.007263 0.007274 0.20% Castro::enforce_min_density() 62 0.005335 0.006116 0.006617 0.18% Castro::swap_state_time_levels() 10 0.003255 0.004259 0.004596 0.12% Castro::buildMetrics() 1 0.001666 0.001956 0.002552 0.07% Castro::finalize_do_advance() 10 0.0006194 0.001639 0.001985 0.05% Castro::post_regrid() 1 0.001511 0.001582 0.001651 0.04% Amr::InitAmr() 1 0.0002998 0.0003748 0.0005238 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.164e-05 0.0001919 0.0002795 0.01% DistributionMapping::LeastUsedCPUs() 1 6.069e-06 0.0001859 0.0002714 0.01% Castro::enforce_consistent_e() 1 7.969e-05 8.652e-05 9.886e-05 0.00% FabArrayBase::getCPC() 41 7.033e-05 7.864e-05 8.785e-05 0.00% Castro::finalize_advance() 10 5.498e-05 6.651e-05 7.435e-05 0.00% Amr::writeSmallPlotFile() 1 3.169e-05 6.158e-05 7.108e-05 0.00% FabArrayBase::CPC::define() 2 2.418e-05 2.672e-05 3.794e-05 0.00% Castro::enforce_speed_limit() 62 1.978e-05 2.737e-05 3.535e-05 0.00% Gravity::swapTimeLevels() 10 6.325e-06 1.242e-05 1.599e-05 0.00% Amr::initSubcycle() 1 8.196e-06 1.05e-05 1.493e-05 0.00% Castro::create_source_corrector() 10 6.432e-06 1.003e-05 1.218e-05 0.00% Castro::FluxRegCrseInit 10 5.062e-06 8.452e-06 1.18e-05 0.00% Gravity::set_mass_offset() 10 6.791e-06 9.438e-06 1.116e-05 0.00% Castro::retry_advance_ctu() 10 3.426e-06 5.976e-06 7.922e-06 0.00% Castro::FluxRegFineAdd() 10 1.816e-06 2.463e-06 3.302e-06 0.00% DistributionMapping::Distribute() 1 9.55e-07 1.188e-06 1.438e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-10-gf84c7a8f77d6) finalized