MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-17-g56b6402d2389) initialized Starting run at 05:39:59 UTC on 2022-10-17. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-17-g56b6402d2 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01599812 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367615704 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.361278486 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.350175045 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.34675386 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.357179695 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.348287409 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341871809 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.342105356 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.341824444 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.342512776 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.055616563 seconds Ending run at 05:40:03 UTC on 2022-10-17. Run time = 3.7500114 Run time without initialization = 3.563121959 Average number of zones advanced per microsecond: 0.736 Average number of zones advanced per microsecond per rank: 0.092 TinyProfiler total time across processes [min...avg...max]: 3.748 ... 3.75 ... 3.75 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1342 2.4498 2.5513 68.03% Castro::do_advance_ctu() 10 0.0339 0.1349 0.4546 12.12% Gravity::make_radial_gravity() 21 0.3515 0.3632 0.3849 10.26% Castro::initData() 1 0.03944 0.08008 0.1197 3.19% FabArray::ParallelCopy_finish() 41 0.0371 0.05855 0.1151 3.07% Castro::estTimeStep() 21 0.02499 0.0673 0.1088 2.90% FabArray::setVal() 143 0.06528 0.0708 0.07253 1.93% Amr::writePlotFile() 2 0.05405 0.05827 0.05928 1.58% FabArray::ParallelCopy_nowait() 41 0.03088 0.0467 0.05159 1.38% Castro::reset_internal_energy(Fab) 1008 0.04698 0.04963 0.05151 1.37% StateData::FillBoundary(geom) 41 0.03615 0.042 0.04692 1.25% Castro::normalize_species() 62 0.04058 0.04132 0.04231 1.13% FillPatchIterator::Initialize 41 0.0252 0.03774 0.04152 1.11% Gravity::interpolate_monopole_grav() 21 0.02618 0.02756 0.02802 0.75% Castro::construct_new_gravity_source() 10 0.0208 0.02332 0.02414 0.64% Castro::expand_state() 10 0.01095 0.0199 0.02326 0.62% Castro::initialize_do_advance() 10 0.0104 0.01883 0.02047 0.55% Castro::computeTemp() 63 0.01732 0.01867 0.01972 0.53% VisMF::Write(FabArray) 2 0.01281 0.01361 0.01779 0.47% MultiFab::Saxpy() 20 0.01079 0.01502 0.0168 0.45% Gravity::get_new_grav_vector() 11 0.01001 0.01246 0.01327 0.35% FabArray::setDomainBndry() 41 0.004972 0.01106 0.01304 0.35% MultiFab::contains_nan() 20 0.01062 0.01158 0.01243 0.33% Castro::construct_old_gravity_source() 10 0.005593 0.01065 0.01239 0.33% Castro::initialize_advance() 10 0.01066 0.01087 0.01149 0.31% Gravity::get_old_grav_vector() 10 0.005997 0.009903 0.01133 0.30% Castro::initMFs() 1 0.006807 0.007186 0.008176 0.22% Castro::construct_new_source() 50 0.005227 0.006712 0.007253 0.19% Castro::enforce_min_density() 62 0.00615 0.006707 0.007177 0.19% main() 1 0.004677 0.006619 0.007085 0.19% StateData::define() 4 0.005664 0.006073 0.006458 0.17% Castro::swap_state_time_levels() 10 0.003524 0.004727 0.004914 0.13% Castro::finalize_do_advance() 10 0.001778 0.00208 0.002307 0.06% Amr::coarseTimeStep() 10 0.001407 0.001643 0.001912 0.05% Castro::buildMetrics() 1 0.001587 0.001687 0.001834 0.05% Amr::timeStep() 10 0.000172 0.0002377 0.0004542 0.01% Amr::InitAmr() 1 0.0002682 0.0002977 0.0004067 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002805 0.0002954 0.0003111 0.01% Castro::clean_state() 62 0.000158 0.0001667 0.0001777 0.00% DistributionMapping::LeastUsedCPUs() 1 6.547e-06 0.0001202 0.0001535 0.00% StateDataPhysBCFunct::() 41 0.0001121 0.0001287 0.0001411 0.00% Castro::enforce_consistent_e() 1 7.827e-05 8.596e-05 9.847e-05 0.00% Castro::construct_old_source() 50 3.952e-05 7.923e-05 9.74e-05 0.00% Castro::do_new_sources() 10 5.253e-05 7.472e-05 9.434e-05 0.00% FabArray::ParallelCopy() 41 8.294e-05 8.655e-05 9.302e-05 0.00% Amr::FinalizeInit() 1 4.028e-06 1.571e-05 9.173e-05 0.00% Castro::Castro() 1 5.404e-05 6.695e-05 8.99e-05 0.00% Castro::do_old_sources() 10 4.43e-05 7.355e-05 8.877e-05 0.00% FillPatchSingleLevel 41 6.407e-05 6.882e-05 8.326e-05 0.00% Castro::subcycle_advance_ctu() 10 4.418e-05 6.614e-05 8.101e-05 0.00% Castro::construct_old_gravity() 10 4.675e-05 5.759e-05 7.387e-05 0.00% Amr::writeSmallPlotFile() 1 3.74e-05 6.461e-05 7.284e-05 0.00% Castro::apply_source_to_state() 20 3.693e-05 4.967e-05 6.56e-05 0.00% FabArrayBase::getCPC() 41 4.645e-05 5.439e-05 6.328e-05 0.00% Castro::advance() 10 3.585e-05 4.632e-05 6.173e-05 0.00% Castro::finalize_advance() 10 4.987e-05 5.284e-05 5.629e-05 0.00% Castro::construct_new_gravity() 10 4.311e-05 4.578e-05 4.749e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.14e-05 2.048e-05 3.838e-05 0.00% Castro::enforce_speed_limit() 62 2.411e-05 2.722e-05 3.098e-05 0.00% Amr::defBaseLevel() 1 1.73e-05 2.247e-05 3.073e-05 0.00% FabArrayBase::CPC::define() 2 2.244e-05 2.584e-05 3.037e-05 0.00% Castro::check_for_nan() 20 2.422e-05 2.682e-05 2.958e-05 0.00% Castro::post_timestep() 10 1.352e-05 2.124e-05 2.597e-05 0.00% Gravity::swapTimeLevels() 10 7.994e-06 1.167e-05 1.584e-05 0.00% Castro::create_source_corrector() 10 7.478e-06 1.119e-05 1.333e-05 0.00% Gravity::set_mass_offset() 10 7.328e-06 1.049e-05 1.229e-05 0.00% Castro::FluxRegCrseInit 10 7.274e-06 9.046e-06 1.215e-05 0.00% Castro::computeNewDt() 9 7.676e-06 9.426e-06 1.013e-05 0.00% Amr::initSubcycle() 1 8.36e-06 9.09e-06 9.813e-06 0.00% Castro::retry_advance_ctu() 10 5.181e-06 6.223e-06 7.371e-06 0.00% Amr::InitializeInit() 1 1.94e-06 4.475e-06 6.483e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.589e-06 4.308e-06 5.149e-06 0.00% Castro::computeInitialDt() 2 3.603e-06 4.141e-06 4.776e-06 0.00% Castro::post_regrid() 1 1.73e-06 2.892e-06 4.286e-06 0.00% Castro::post_init() 1 3.291e-06 3.734e-06 4.108e-06 0.00% Amr::init() 1 1.793e-06 2.218e-06 2.766e-06 0.00% Castro::FluxRegFineAdd() 10 1.875e-06 2.308e-06 2.741e-06 0.00% Amr::initialInit() 1 1.158e-06 1.544e-06 1.9e-06 0.00% DistributionMapping::Distribute() 1 9.7e-07 1.114e-06 1.198e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.748 3.75 3.75 100.00% Amr::coarseTimeStep() 10 3.5 3.5 3.5 93.34% Amr::timeStep() 10 3.491 3.491 3.491 93.09% Castro::advance() 10 3.474 3.475 3.475 92.66% Castro::subcycle_advance_ctu() 10 3.4 3.403 3.41 90.92% Castro::do_advance_ctu() 10 3.4 3.403 3.41 90.92% Castro::construct_ctu_hydro_source() 10 2.134 2.45 2.551 68.03% Gravity::make_radial_gravity() 21 0.3515 0.3632 0.3849 10.26% Gravity::get_new_grav_vector() 11 0.2354 0.2385 0.2402 6.40% Castro::construct_old_gravity() 10 0.207 0.2177 0.2337 6.23% Gravity::get_old_grav_vector() 10 0.206 0.2169 0.2331 6.22% Castro::construct_new_gravity() 10 0.2114 0.2135 0.2147 5.73% FillPatchIterator::Initialize 41 0.1856 0.1964 0.2129 5.68% Amr::init() 1 0.1863 0.1865 0.1865 4.97% Castro::initialize_do_advance() 10 0.1684 0.1796 0.1858 4.96% FillPatchSingleLevel 41 0.1317 0.1476 0.1827 4.87% Amr::initialInit() 1 0.1701 0.1703 0.1705 4.55% FabArray::ParallelCopy() 41 0.08816 0.1054 0.1462 3.90% Amr::InitializeInit() 1 0.06021 0.1016 0.1421 3.79% Amr::defBaseLevel() 1 0.0602 0.1016 0.1421 3.79% Castro::expand_state() 10 0.1241 0.1306 0.1347 3.59% Castro::initData() 1 0.04353 0.08407 0.1233 3.29% Castro::clean_state() 62 0.1119 0.1159 0.1189 3.17% FabArray::ParallelCopy_finish() 41 0.0371 0.05855 0.1151 3.07% Amr::FinalizeInit() 1 0.02815 0.06871 0.1103 2.94% Castro::estTimeStep() 21 0.02499 0.0673 0.1088 2.90% Castro::computeInitialDt() 2 0.001591 0.04214 0.08357 2.23% Castro::initialize_advance() 10 0.06476 0.07196 0.07459 1.99% FabArray::setVal() 143 0.06528 0.0708 0.07253 1.93% Amr::writePlotFile() 2 0.07171 0.07188 0.07211 1.92% Castro::computeTemp() 63 0.0646 0.06859 0.07153 1.91% Castro::do_new_sources() 10 0.06121 0.06492 0.06612 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04728 0.04992 0.05181 1.38% FabArray::ParallelCopy_nowait() 41 0.03095 0.04678 0.05167 1.38% Castro::reset_internal_energy(Fab) 1008 0.04698 0.04963 0.05151 1.37% Castro::do_old_sources() 10 0.03675 0.04682 0.05051 1.35% StateDataPhysBCFunct::() 41 0.03626 0.04213 0.04705 1.25% StateData::FillBoundary(geom) 41 0.03615 0.042 0.04692 1.25% Castro::normalize_species() 62 0.04058 0.04132 0.04231 1.13% Castro::construct_new_source() 50 0.02602 0.03003 0.03132 0.84% Gravity::interpolate_monopole_grav() 21 0.02618 0.02756 0.02802 0.75% Castro::post_init() 1 0.02564 0.0259 0.02608 0.70% Castro::construct_new_gravity_source() 10 0.0208 0.02332 0.02414 0.64% VisMF::Write(FabArray) 2 0.01281 0.01361 0.01779 0.47% Castro::apply_source_to_state() 20 0.01083 0.01507 0.01687 0.45% MultiFab::Saxpy() 20 0.01079 0.01502 0.0168 0.45% Castro::post_timestep() 10 0.01546 0.01587 0.0162 0.43% FabArray::setDomainBndry() 41 0.004972 0.01106 0.01304 0.35% Castro::construct_old_source() 50 0.005633 0.01073 0.01249 0.33% Castro::check_for_nan() 20 0.01065 0.0116 0.01245 0.33% MultiFab::contains_nan() 20 0.01062 0.01158 0.01243 0.33% Castro::construct_old_gravity_source() 10 0.005593 0.01065 0.01239 0.33% Castro::Castro() 1 0.01069 0.01128 0.01222 0.33% Castro::initMFs() 1 0.006807 0.007186 0.008176 0.22% Castro::enforce_min_density() 62 0.00615 0.006707 0.007177 0.19% Castro::computeNewDt() 9 0.007047 0.00706 0.007069 0.19% AmrLevel::AmrLevel(dm) 1 0.005687 0.006094 0.006484 0.17% StateData::define() 4 0.005664 0.006073 0.006458 0.17% Castro::swap_state_time_levels() 10 0.003524 0.004727 0.004914 0.13% Castro::finalize_do_advance() 10 0.001778 0.00208 0.002307 0.06% Castro::buildMetrics() 1 0.001706 0.001815 0.00198 0.05% Castro::post_regrid() 1 0.001522 0.001577 0.001626 0.04% Amr::InitAmr() 1 0.0002769 0.0003068 0.0004151 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.111e-05 0.0001256 0.0001599 0.00% DistributionMapping::LeastUsedCPUs() 1 6.547e-06 0.0001202 0.0001535 0.00% Castro::enforce_consistent_e() 1 7.827e-05 8.596e-05 9.847e-05 0.00% FabArrayBase::getCPC() 41 7.199e-05 8.022e-05 8.827e-05 0.00% Amr::writeSmallPlotFile() 1 3.74e-05 6.461e-05 7.284e-05 0.00% Castro::finalize_advance() 10 5.968e-05 6.419e-05 6.761e-05 0.00% Castro::enforce_speed_limit() 62 2.411e-05 2.722e-05 3.098e-05 0.00% FabArrayBase::CPC::define() 2 2.244e-05 2.584e-05 3.037e-05 0.00% Gravity::swapTimeLevels() 10 7.994e-06 1.167e-05 1.584e-05 0.00% Castro::create_source_corrector() 10 7.478e-06 1.119e-05 1.333e-05 0.00% Gravity::set_mass_offset() 10 7.328e-06 1.049e-05 1.229e-05 0.00% Castro::FluxRegCrseInit 10 7.274e-06 9.046e-06 1.215e-05 0.00% Amr::initSubcycle() 1 8.36e-06 9.09e-06 9.813e-06 0.00% Castro::retry_advance_ctu() 10 5.181e-06 6.223e-06 7.371e-06 0.00% Castro::FluxRegFineAdd() 10 1.875e-06 2.308e-06 2.741e-06 0.00% DistributionMapping::Distribute() 1 9.7e-07 1.114e-06 1.198e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-17-g56b6402d2389) finalized