MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-17-g56b6402d2389) initialized Starting run at 05:40:03 UTC on 2022-10-18. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-17-g56b6402d2 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015985739 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358770436 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344152394 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342833604 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344411371 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.350058412 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.348048426 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340181742 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340898932 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339624205 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.34031412 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010617568 seconds Ending run at 05:40:07 UTC on 2022-10-18. Run time = 3.701627352 Run time without initialization = 3.467703273 Average number of zones advanced per microsecond: 0.756 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.699 ... 3.701 ... 3.702 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1156 2.4279 2.5304 68.36% Castro::do_advance_ctu() 10 0.02828 0.1327 0.4482 12.11% Gravity::make_radial_gravity() 21 0.338 0.3528 0.379 10.24% Castro::initData() 1 0.03956 0.1009 0.16 4.32% Castro::estTimeStep() 21 0.02623 0.09003 0.1527 4.13% FabArray::ParallelCopy_finish() 41 0.03863 0.06017 0.1273 3.44% FabArray::setVal() 143 0.0516 0.06588 0.06914 1.87% Castro::reset_internal_energy(Fab) 1008 0.04659 0.05013 0.05272 1.42% FabArray::ParallelCopy_nowait() 41 0.02747 0.04492 0.05028 1.36% StateData::FillBoundary(geom) 41 0.03683 0.0419 0.04643 1.25% Castro::normalize_species() 62 0.04021 0.04144 0.04252 1.15% FillPatchIterator::Initialize 41 0.0247 0.0364 0.04108 1.11% Gravity::interpolate_monopole_grav() 21 0.02645 0.02761 0.02805 0.76% Castro::construct_new_gravity_source() 10 0.01966 0.02274 0.02358 0.64% Castro::expand_state() 10 0.009962 0.01851 0.02195 0.59% Castro::computeTemp() 63 0.0173 0.01888 0.01992 0.54% Castro::initialize_do_advance() 10 0.01037 0.01752 0.01951 0.53% VisMF::Write(FabArray) 2 0.01312 0.01377 0.01659 0.45% MultiFab::Saxpy() 20 0.008591 0.01438 0.01615 0.44% Amr::writePlotFile() 2 0.01022 0.01314 0.01399 0.38% MultiFab::contains_nan() 20 0.009378 0.01134 0.01262 0.34% Gravity::get_new_grav_vector() 11 0.007565 0.01144 0.01258 0.34% FabArray::setDomainBndry() 41 0.004825 0.01034 0.01249 0.34% Castro::construct_old_gravity_source() 10 0.004938 0.01013 0.01183 0.32% Gravity::get_old_grav_vector() 10 0.005676 0.009443 0.0112 0.30% Castro::initialize_advance() 10 0.00323 0.008763 0.01069 0.29% Castro::initMFs() 1 0.006715 0.008507 0.01014 0.27% StateData::define() 4 0.005617 0.007046 0.008198 0.22% Castro::construct_new_source() 50 0.004797 0.006545 0.007202 0.19% main() 1 0.004178 0.0064 0.007132 0.19% Castro::enforce_min_density() 62 0.005961 0.006634 0.007066 0.19% Castro::swap_state_time_levels() 10 0.003347 0.004501 0.005188 0.14% Amr::coarseTimeStep() 10 0.00106 0.002168 0.004355 0.12% Castro::buildMetrics() 1 0.001614 0.002006 0.002347 0.06% Castro::finalize_do_advance() 10 0.0006454 0.00143 0.00168 0.05% Amr::InitAmr() 1 0.0002794 0.0004288 0.0005095 0.01% Amr::timeStep() 10 0.0001754 0.0002214 0.0004026 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002849 0.0003013 0.0003146 0.01% DistributionMapping::LeastUsedCPUs() 1 7.3e-06 0.0001059 0.0002795 0.01% Castro::clean_state() 62 0.0001507 0.0001678 0.0002011 0.01% StateDataPhysBCFunct::() 41 9.8e-05 0.0001245 0.0001548 0.00% Castro::enforce_consistent_e() 1 8.879e-05 0.0001105 0.0001447 0.00% Castro::construct_old_source() 50 3.435e-05 7.548e-05 9.6e-05 0.00% FabArray::ParallelCopy() 41 6.872e-05 7.996e-05 9.443e-05 0.00% Castro::do_old_sources() 10 3.841e-05 6.939e-05 9.143e-05 0.00% Castro::do_new_sources() 10 4.425e-05 7.048e-05 8.983e-05 0.00% Castro::Castro() 1 5.27e-05 6.831e-05 8.144e-05 0.00% FillPatchSingleLevel 41 6.221e-05 6.98e-05 7.564e-05 0.00% Castro::subcycle_advance_ctu() 10 3.794e-05 5.714e-05 7.508e-05 0.00% Amr::writeSmallPlotFile() 1 2.58e-05 4.812e-05 6.826e-05 0.00% Castro::advance() 10 3.071e-05 4.876e-05 6.738e-05 0.00% Amr::FinalizeInit() 1 3.588e-06 1.27e-05 6.669e-05 0.00% Castro::construct_old_gravity() 10 3.737e-05 5.443e-05 6.534e-05 0.00% Castro::apply_source_to_state() 20 3.332e-05 5.276e-05 6.45e-05 0.00% FabArrayBase::getCPC() 41 4.679e-05 5.316e-05 6.272e-05 0.00% Castro::construct_new_gravity() 10 3.581e-05 4.579e-05 5.392e-05 0.00% Castro::finalize_advance() 10 4.518e-05 5.015e-05 5.309e-05 0.00% FabArrayBase::CPC::define() 2 2.192e-05 2.744e-05 3.886e-05 0.00% Castro::enforce_speed_limit() 62 2.313e-05 2.769e-05 3.404e-05 0.00% Amr::defBaseLevel() 1 1.775e-05 2.402e-05 3.074e-05 0.00% Castro::check_for_nan() 20 2.213e-05 2.618e-05 2.975e-05 0.00% Castro::post_timestep() 10 1.358e-05 1.731e-05 2.725e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.392e-05 1.779e-05 2.174e-05 0.00% Amr::initSubcycle() 1 8.096e-06 1.299e-05 2.004e-05 0.00% Gravity::swapTimeLevels() 10 5.418e-06 1.243e-05 1.767e-05 0.00% Castro::create_source_corrector() 10 6.563e-06 1.066e-05 1.403e-05 0.00% Gravity::set_mass_offset() 10 7.516e-06 9.395e-06 1.221e-05 0.00% Castro::computeNewDt() 9 7.969e-06 9.297e-06 1.06e-05 0.00% Castro::FluxRegCrseInit 10 4.695e-06 7.531e-06 9.098e-06 0.00% Castro::post_regrid() 1 1.755e-06 3.283e-06 7.426e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.464e-06 5.078e-06 7.346e-06 0.00% Castro::retry_advance_ctu() 10 4.126e-06 6.037e-06 7.329e-06 0.00% Amr::InitializeInit() 1 2.345e-06 3.598e-06 5.78e-06 0.00% Castro::computeInitialDt() 2 3.076e-06 3.901e-06 5.588e-06 0.00% Castro::post_init() 1 3.023e-06 3.649e-06 4.254e-06 0.00% Castro::FluxRegFineAdd() 10 2.06e-06 2.326e-06 2.921e-06 0.00% Amr::init() 1 1.84e-06 2.144e-06 2.554e-06 0.00% DistributionMapping::Distribute() 1 9.58e-07 1.521e-06 2.123e-06 0.00% Amr::initialInit() 1 1.254e-06 1.499e-06 1.919e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.699 3.701 3.702 100.00% Amr::coarseTimeStep() 10 3.45 3.45 3.45 93.20% Amr::timeStep() 10 3.437 3.44 3.441 92.95% Castro::advance() 10 3.422 3.423 3.423 92.48% Castro::subcycle_advance_ctu() 10 3.352 3.356 3.371 91.06% Castro::do_advance_ctu() 10 3.352 3.356 3.371 91.06% Castro::construct_ctu_hydro_source() 10 2.116 2.428 2.53 68.36% Gravity::make_radial_gravity() 21 0.338 0.3528 0.379 10.24% Gravity::get_new_grav_vector() 11 0.229 0.2323 0.2337 6.31% Amr::init() 1 0.2332 0.2333 0.2335 6.31% Castro::construct_old_gravity() 10 0.1981 0.2113 0.2317 6.26% Gravity::get_old_grav_vector() 10 0.1971 0.2106 0.2311 6.24% FillPatchIterator::Initialize 41 0.1837 0.1941 0.2215 5.98% Amr::initialInit() 1 0.2168 0.2171 0.2176 5.88% Castro::construct_new_gravity() 10 0.2031 0.205 0.2061 5.57% FillPatchSingleLevel 41 0.1321 0.1473 0.1919 5.19% Amr::InitializeInit() 1 0.05969 0.1249 0.1866 5.04% Amr::defBaseLevel() 1 0.05969 0.1249 0.1866 5.04% Castro::initialize_do_advance() 10 0.1673 0.1759 0.1828 4.94% Castro::initData() 1 0.04343 0.1052 0.1638 4.42% Amr::FinalizeInit() 1 0.03036 0.09218 0.1574 4.25% FabArray::ParallelCopy() 41 0.08906 0.1052 0.1549 4.19% Castro::estTimeStep() 21 0.02623 0.09003 0.1527 4.13% Castro::expand_state() 10 0.1212 0.1282 0.1344 3.63% Castro::computeInitialDt() 2 0.001592 0.06332 0.1286 3.47% FabArray::ParallelCopy_finish() 41 0.03863 0.06017 0.1273 3.44% Castro::clean_state() 62 0.1095 0.1164 0.1201 3.24% Castro::computeTemp() 63 0.06419 0.06932 0.07296 1.97% Castro::initialize_advance() 10 0.05161 0.06753 0.07144 1.93% FabArray::setVal() 143 0.0516 0.06588 0.06914 1.87% Castro::do_new_sources() 10 0.05297 0.06293 0.06493 1.75% Castro::reset_internal_energy(MultiFab) 63 0.04689 0.05044 0.05304 1.43% Castro::reset_internal_energy(Fab) 1008 0.04659 0.05013 0.05272 1.42% FabArray::ParallelCopy_nowait() 41 0.02754 0.045 0.05035 1.36% Castro::do_old_sources() 10 0.03219 0.04513 0.04894 1.32% StateDataPhysBCFunct::() 41 0.03695 0.04202 0.04656 1.26% StateData::FillBoundary(geom) 41 0.03683 0.0419 0.04643 1.25% Castro::normalize_species() 62 0.04021 0.04144 0.04252 1.15% Castro::construct_new_source() 50 0.02446 0.02928 0.03058 0.83% Castro::post_init() 1 0.02763 0.02809 0.02832 0.77% Gravity::interpolate_monopole_grav() 21 0.02645 0.02761 0.02805 0.76% Amr::writePlotFile() 2 0.02657 0.02691 0.02718 0.73% Castro::construct_new_gravity_source() 10 0.01966 0.02274 0.02358 0.64% Castro::post_timestep() 10 0.01474 0.01612 0.01724 0.47% VisMF::Write(FabArray) 2 0.01312 0.01377 0.01659 0.45% Castro::apply_source_to_state() 20 0.008624 0.01443 0.0162 0.44% MultiFab::Saxpy() 20 0.008591 0.01438 0.01615 0.44% Castro::Castro() 1 0.01011 0.01251 0.01476 0.40% Castro::check_for_nan() 20 0.009401 0.01136 0.01265 0.34% MultiFab::contains_nan() 20 0.009378 0.01134 0.01262 0.34% FabArray::setDomainBndry() 41 0.004825 0.01034 0.01249 0.34% Castro::construct_old_source() 50 0.004972 0.01021 0.01192 0.32% Castro::construct_old_gravity_source() 10 0.004938 0.01013 0.01183 0.32% Castro::initMFs() 1 0.006715 0.008507 0.01014 0.27% AmrLevel::AmrLevel(dm) 1 0.005631 0.007063 0.008218 0.22% StateData::define() 4 0.005617 0.007046 0.008198 0.22% Castro::computeNewDt() 9 0.007361 0.007368 0.007374 0.20% Castro::enforce_min_density() 62 0.005961 0.006634 0.007066 0.19% Castro::swap_state_time_levels() 10 0.003347 0.004501 0.005188 0.14% Castro::buildMetrics() 1 0.001725 0.002174 0.002563 0.07% Castro::post_regrid() 1 0.001502 0.001679 0.001963 0.05% Castro::finalize_do_advance() 10 0.0006454 0.00143 0.00168 0.05% Amr::InitAmr() 1 0.0002883 0.0004418 0.0005236 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.294e-05 0.0001125 0.0002861 0.01% DistributionMapping::LeastUsedCPUs() 1 7.3e-06 0.0001059 0.0002795 0.01% Castro::enforce_consistent_e() 1 8.879e-05 0.0001105 0.0001447 0.00% FabArrayBase::getCPC() 41 7.372e-05 8.059e-05 9.882e-05 0.00% Amr::writeSmallPlotFile() 1 2.58e-05 4.812e-05 6.826e-05 0.00% Castro::finalize_advance() 10 5.195e-05 6.001e-05 6.424e-05 0.00% FabArrayBase::CPC::define() 2 2.192e-05 2.744e-05 3.886e-05 0.00% Castro::enforce_speed_limit() 62 2.313e-05 2.769e-05 3.404e-05 0.00% Amr::initSubcycle() 1 8.096e-06 1.299e-05 2.004e-05 0.00% Gravity::swapTimeLevels() 10 5.418e-06 1.243e-05 1.767e-05 0.00% Castro::create_source_corrector() 10 6.563e-06 1.066e-05 1.403e-05 0.00% Gravity::set_mass_offset() 10 7.516e-06 9.395e-06 1.221e-05 0.00% Castro::FluxRegCrseInit 10 4.695e-06 7.531e-06 9.098e-06 0.00% Castro::retry_advance_ctu() 10 4.126e-06 6.037e-06 7.329e-06 0.00% Castro::FluxRegFineAdd() 10 2.06e-06 2.326e-06 2.921e-06 0.00% DistributionMapping::Distribute() 1 9.58e-07 1.521e-06 2.123e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-17-g56b6402d2389) finalized