MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-20-g3082028e4287) initialized Starting run at 05:39:28 UTC on 2022-10-20. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-20-g3082028e4 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015673164 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.354556282 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345216675 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342642054 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342924162 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353687635 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353381444 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338944633 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33944693 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339525936 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.342096986 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.044903962 seconds Ending run at 05:39:32 UTC on 2022-10-20. Run time = 3.685929562 Run time without initialization = 3.505165007 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.684 ... 3.685 ... 3.686 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1479 2.4227 2.5187 68.33% Castro::do_advance_ctu() 10 0.0342 0.1308 0.4085 11.08% Gravity::make_radial_gravity() 21 0.3407 0.3511 0.3784 10.27% FabArray::ParallelCopy_finish() 41 0.04552 0.06355 0.119 3.23% Castro::initData() 1 0.03916 0.07801 0.115 3.12% Castro::estTimeStep() 21 0.03258 0.06832 0.1059 2.87% FabArray::setVal() 143 0.06344 0.07021 0.07212 1.96% Castro::reset_internal_energy(Fab) 1008 0.04686 0.04935 0.05157 1.40% FabArray::ParallelCopy_nowait() 41 0.02743 0.04446 0.0498 1.35% Amr::writePlotFile() 2 0.04498 0.04743 0.04835 1.31% StateData::FillBoundary(geom) 41 0.0346 0.04162 0.04521 1.23% Castro::normalize_species() 62 0.03958 0.04116 0.04172 1.13% FillPatchIterator::Initialize 41 0.02363 0.03602 0.04018 1.09% Gravity::interpolate_monopole_grav() 21 0.02679 0.02763 0.02801 0.76% Castro::construct_new_gravity_source() 10 0.02039 0.02303 0.02544 0.69% Castro::expand_state() 10 0.009744 0.01898 0.02233 0.61% Castro::computeTemp() 63 0.01709 0.01873 0.01979 0.54% Castro::initialize_do_advance() 10 0.009428 0.0173 0.01942 0.53% MultiFab::Saxpy() 20 0.008856 0.0144 0.01625 0.44% VisMF::Write(FabArray) 2 0.01264 0.01332 0.01585 0.43% Gravity::get_new_grav_vector() 11 0.007619 0.01144 0.01267 0.34% FabArray::setDomainBndry() 41 0.004748 0.01043 0.01243 0.34% Castro::construct_old_gravity_source() 10 0.004981 0.009996 0.01162 0.32% Castro::initialize_advance() 10 0.01068 0.01094 0.01139 0.31% MultiFab::contains_nan() 20 0.009508 0.01093 0.01131 0.31% Gravity::get_old_grav_vector() 10 0.005503 0.009439 0.01089 0.30% Castro::initMFs() 1 0.006658 0.007098 0.008448 0.23% main() 1 0.004628 0.006499 0.007125 0.19% Castro::construct_new_source() 50 0.004867 0.006519 0.007082 0.19% Castro::enforce_min_density() 62 0.005913 0.006653 0.006982 0.19% StateData::define() 4 0.005686 0.005896 0.006556 0.18% Castro::swap_state_time_levels() 10 0.003322 0.004261 0.004592 0.12% Amr::coarseTimeStep() 10 0.001051 0.001668 0.002777 0.08% Castro::buildMetrics() 1 0.00163 0.001685 0.001842 0.05% Castro::finalize_do_advance() 10 0.0006613 0.001437 0.001661 0.05% Amr::timeStep() 10 0.0001722 0.0002259 0.000464 0.01% Amr::InitAmr() 1 0.0002673 0.0002998 0.000432 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002816 0.0002865 0.00029 0.01% DistributionMapping::LeastUsedCPUs() 1 7.492e-06 0.0001422 0.0001684 0.00% Castro::clean_state() 62 0.0001272 0.0001512 0.0001671 0.00% StateDataPhysBCFunct::() 41 9.512e-05 0.0001238 0.0001411 0.00% Castro::enforce_consistent_e() 1 7.746e-05 9.146e-05 0.0001119 0.00% Castro::construct_old_source() 50 3.535e-05 7.495e-05 9.255e-05 0.00% FabArray::ParallelCopy() 41 5.8e-05 7.645e-05 9.103e-05 0.00% Castro::do_new_sources() 10 4.236e-05 7.105e-05 8.656e-05 0.00% Amr::FinalizeInit() 1 3.592e-06 1.424e-05 8.285e-05 0.00% Castro::do_old_sources() 10 4.456e-05 6.637e-05 7.783e-05 0.00% Castro::Castro() 1 5.223e-05 6.435e-05 7.535e-05 0.00% FillPatchSingleLevel 41 5.137e-05 6.365e-05 7.11e-05 0.00% Castro::subcycle_advance_ctu() 10 4.372e-05 6.003e-05 7.106e-05 0.00% Amr::writeSmallPlotFile() 1 3.192e-05 6.215e-05 6.857e-05 0.00% Castro::construct_old_gravity() 10 3.434e-05 5.265e-05 6.173e-05 0.00% FabArrayBase::getCPC() 41 4.561e-05 5.441e-05 6.168e-05 0.00% Castro::apply_source_to_state() 20 3.726e-05 4.833e-05 5.553e-05 0.00% Castro::finalize_advance() 10 4.64e-05 5.108e-05 5.502e-05 0.00% Castro::construct_new_gravity() 10 3.148e-05 4.623e-05 5.228e-05 0.00% Castro::advance() 10 2.967e-05 4.017e-05 4.487e-05 0.00% Amr::defBaseLevel() 1 1.767e-05 2.821e-05 4.426e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.462e-05 2.319e-05 3.737e-05 0.00% Castro::check_for_nan() 20 2.088e-05 2.594e-05 3.115e-05 0.00% FabArrayBase::CPC::define() 2 2.049e-05 2.497e-05 2.876e-05 0.00% Castro::enforce_speed_limit() 62 2.489e-05 2.708e-05 2.838e-05 0.00% Castro::post_timestep() 10 1.406e-05 2.089e-05 2.767e-05 0.00% Gravity::swapTimeLevels() 10 7.431e-06 1.278e-05 2.116e-05 0.00% Castro::create_source_corrector() 10 7.527e-06 1.054e-05 1.23e-05 0.00% Gravity::set_mass_offset() 10 7.455e-06 9.435e-06 1.088e-05 0.00% Castro::computeNewDt() 9 7.907e-06 9.511e-06 1.08e-05 0.00% Castro::FluxRegCrseInit 10 5.964e-06 8.275e-06 1.062e-05 0.00% Amr::initSubcycle() 1 8.485e-06 9.053e-06 9.84e-06 0.00% Amr::InitializeInit() 1 2.021e-06 4.66e-06 9.13e-06 0.00% Castro::retry_advance_ctu() 10 4.501e-06 6.146e-06 7.601e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.816e-06 4.343e-06 6.14e-06 0.00% Castro::post_init() 1 2.88e-06 3.991e-06 4.77e-06 0.00% Castro::computeInitialDt() 2 3.412e-06 3.837e-06 4.37e-06 0.00% Castro::post_regrid() 1 1.629e-06 2.812e-06 4.104e-06 0.00% Castro::FluxRegFineAdd() 10 1.783e-06 2.375e-06 3.033e-06 0.00% Amr::init() 1 1.706e-06 2.158e-06 2.801e-06 0.00% Amr::initialInit() 1 1.302e-06 1.499e-06 1.965e-06 0.00% DistributionMapping::Distribute() 1 9.43e-07 1.045e-06 1.303e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.683 3.685 3.686 100.00% Amr::coarseTimeStep() 10 3.453 3.453 3.453 93.68% Amr::timeStep() 10 3.442 3.444 3.444 93.44% Castro::advance() 10 3.427 3.428 3.428 93.00% Castro::subcycle_advance_ctu() 10 3.353 3.355 3.357 91.07% Castro::do_advance_ctu() 10 3.353 3.355 3.357 91.07% Castro::construct_ctu_hydro_source() 10 2.148 2.423 2.519 68.33% Gravity::make_radial_gravity() 21 0.3407 0.3511 0.3784 10.27% Gravity::get_new_grav_vector() 11 0.229 0.2309 0.2334 6.33% Castro::construct_old_gravity() 10 0.2025 0.2112 0.2324 6.31% Gravity::get_old_grav_vector() 10 0.2016 0.2103 0.2319 6.29% FillPatchIterator::Initialize 41 0.1894 0.1964 0.2097 5.69% Castro::construct_new_gravity() 10 0.2041 0.2056 0.2076 5.63% Castro::initialize_do_advance() 10 0.1607 0.1789 0.1861 5.05% FillPatchSingleLevel 41 0.1372 0.15 0.1813 4.92% Amr::init() 1 0.1802 0.1803 0.1804 4.89% Amr::initialInit() 1 0.1644 0.1646 0.1648 4.47% FabArray::ParallelCopy() 41 0.09454 0.1082 0.1466 3.98% Castro::expand_state() 10 0.1234 0.1314 0.1373 3.72% Amr::InitializeInit() 1 0.06006 0.09935 0.1362 3.69% Amr::defBaseLevel() 1 0.06005 0.09935 0.1362 3.69% Castro::clean_state() 62 0.1107 0.1154 0.1195 3.24% Castro::initData() 1 0.04318 0.08203 0.1192 3.23% FabArray::ParallelCopy_finish() 41 0.04552 0.06355 0.119 3.23% Castro::estTimeStep() 21 0.03258 0.06832 0.1059 2.87% Amr::FinalizeInit() 1 0.0282 0.06521 0.1047 2.84% Castro::computeInitialDt() 2 0.001705 0.03848 0.0778 2.11% Castro::initialize_advance() 10 0.06993 0.07279 0.07433 2.02% FabArray::setVal() 143 0.06344 0.07021 0.07212 1.96% Castro::computeTemp() 63 0.06423 0.06836 0.07165 1.94% Castro::do_new_sources() 10 0.05486 0.06338 0.06767 1.84% Amr::writePlotFile() 2 0.06054 0.06075 0.06098 1.65% Castro::reset_internal_energy(MultiFab) 63 0.04714 0.04964 0.05186 1.41% Castro::reset_internal_energy(Fab) 1008 0.04686 0.04935 0.05157 1.40% FabArray::ParallelCopy_nowait() 41 0.02751 0.04454 0.04988 1.35% Castro::do_old_sources() 10 0.03289 0.04499 0.04873 1.32% StateDataPhysBCFunct::() 41 0.0347 0.04174 0.04534 1.23% StateData::FillBoundary(geom) 41 0.0346 0.04162 0.04521 1.23% Castro::normalize_species() 62 0.03958 0.04116 0.04172 1.13% Castro::construct_new_source() 50 0.02526 0.02955 0.03066 0.83% Gravity::interpolate_monopole_grav() 21 0.02679 0.02763 0.02801 0.76% Castro::post_init() 1 0.02585 0.02604 0.02628 0.71% Castro::construct_new_gravity_source() 10 0.02039 0.02303 0.02544 0.69% Castro::apply_source_to_state() 20 0.008893 0.01445 0.0163 0.44% MultiFab::Saxpy() 20 0.008856 0.0144 0.01625 0.44% Castro::post_timestep() 10 0.01484 0.01569 0.0162 0.44% VisMF::Write(FabArray) 2 0.01264 0.01332 0.01585 0.43% FabArray::setDomainBndry() 41 0.004748 0.01043 0.01243 0.34% Castro::Castro() 1 0.01094 0.01123 0.01205 0.33% Castro::construct_old_source() 50 0.005016 0.01007 0.01171 0.32% Castro::construct_old_gravity_source() 10 0.004981 0.009996 0.01162 0.32% Castro::check_for_nan() 20 0.009528 0.01096 0.01134 0.31% MultiFab::contains_nan() 20 0.009508 0.01093 0.01131 0.31% Castro::initMFs() 1 0.006658 0.007098 0.008448 0.23% Castro::computeNewDt() 9 0.006972 0.006982 0.00699 0.19% Castro::enforce_min_density() 62 0.005913 0.006653 0.006982 0.19% AmrLevel::AmrLevel(dm) 1 0.005702 0.005919 0.006582 0.18% StateData::define() 4 0.005686 0.005896 0.006556 0.18% Castro::swap_state_time_levels() 10 0.003322 0.004261 0.004592 0.12% Castro::buildMetrics() 1 0.001766 0.001827 0.002003 0.05% Castro::post_regrid() 1 0.001513 0.001597 0.001663 0.05% Castro::finalize_do_advance() 10 0.0006613 0.001437 0.001661 0.05% Amr::InitAmr() 1 0.0002763 0.0003088 0.0004405 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.239e-05 0.0001476 0.0001758 0.00% DistributionMapping::LeastUsedCPUs() 1 7.492e-06 0.0001422 0.0001684 0.00% Castro::enforce_consistent_e() 1 7.746e-05 9.146e-05 0.0001119 0.00% FabArrayBase::getCPC() 41 7.253e-05 7.938e-05 8.5e-05 0.00% Amr::writeSmallPlotFile() 1 3.192e-05 6.215e-05 6.857e-05 0.00% Castro::finalize_advance() 10 5.432e-05 6.174e-05 6.779e-05 0.00% FabArrayBase::CPC::define() 2 2.049e-05 2.497e-05 2.876e-05 0.00% Castro::enforce_speed_limit() 62 2.489e-05 2.708e-05 2.838e-05 0.00% Gravity::swapTimeLevels() 10 7.431e-06 1.278e-05 2.116e-05 0.00% Castro::create_source_corrector() 10 7.527e-06 1.054e-05 1.23e-05 0.00% Gravity::set_mass_offset() 10 7.455e-06 9.435e-06 1.088e-05 0.00% Castro::FluxRegCrseInit 10 5.964e-06 8.275e-06 1.062e-05 0.00% Amr::initSubcycle() 1 8.485e-06 9.053e-06 9.84e-06 0.00% Castro::retry_advance_ctu() 10 4.501e-06 6.146e-06 7.601e-06 0.00% Castro::FluxRegFineAdd() 10 1.783e-06 2.375e-06 3.033e-06 0.00% DistributionMapping::Distribute() 1 9.43e-07 1.045e-06 1.303e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-20-g3082028e4287) finalized