MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-20-g3082028e4287) initialized Starting run at 05:39:35 UTC on 2022-10-21. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-20-g3082028e4 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01533023 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.359111197 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345707357 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345877786 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.347030077 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355588694 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.353723883 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.34189543 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340795839 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.34084529 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.353143848 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010929027 seconds Ending run at 05:39:38 UTC on 2022-10-21. Run time = 3.704033879 Run time without initialization = 3.502567356 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.702 ... 3.704 ... 3.704 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0607 2.4171 2.5529 68.92% Castro::do_advance_ctu() 10 0.02784 0.163 0.5239 14.14% Gravity::make_radial_gravity() 21 0.3378 0.3508 0.3742 10.10% Castro::initData() 1 0.03922 0.08197 0.1341 3.62% Castro::estTimeStep() 21 0.02775 0.08124 0.1256 3.39% FabArray::ParallelCopy_finish() 41 0.04389 0.06352 0.1133 3.06% FabArray::setVal() 143 0.06977 0.07206 0.07444 2.01% Castro::reset_internal_energy(Fab) 1008 0.04803 0.0504 0.05222 1.41% FabArray::ParallelCopy_nowait() 41 0.03048 0.04535 0.05111 1.38% StateData::FillBoundary(geom) 41 0.0332 0.04145 0.04712 1.27% Castro::normalize_species() 62 0.0404 0.0415 0.04284 1.16% FillPatchIterator::Initialize 41 0.02353 0.03605 0.04072 1.10% Gravity::interpolate_monopole_grav() 21 0.02564 0.02728 0.0279 0.75% Castro::construct_new_gravity_source() 10 0.02148 0.02362 0.02494 0.67% Castro::expand_state() 10 0.01042 0.01931 0.02294 0.62% Castro::computeTemp() 63 0.0176 0.01932 0.02002 0.54% Castro::initialize_do_advance() 10 0.009616 0.01751 0.01912 0.52% VisMF::Write(FabArray) 2 0.01264 0.01339 0.01755 0.47% MultiFab::Saxpy() 20 0.01128 0.015 0.01664 0.45% Amr::writePlotFile() 2 0.008939 0.01309 0.0138 0.37% Gravity::get_new_grav_vector() 11 0.009874 0.01225 0.01327 0.36% FabArray::setDomainBndry() 41 0.005128 0.01059 0.01289 0.35% Castro::construct_old_gravity_source() 10 0.00583 0.01053 0.01234 0.33% MultiFab::contains_nan() 20 0.01006 0.01122 0.01219 0.33% Castro::initialize_advance() 10 0.01056 0.01096 0.01157 0.31% Gravity::get_old_grav_vector() 10 0.00568 0.009584 0.01145 0.31% Castro::initMFs() 1 0.006867 0.007282 0.008485 0.23% Castro::construct_new_source() 50 0.005142 0.006662 0.007418 0.20% main() 1 0.004589 0.006582 0.007111 0.19% Castro::enforce_min_density() 62 0.006468 0.006791 0.007071 0.19% StateData::define() 4 0.005681 0.005911 0.006456 0.17% Castro::swap_state_time_levels() 10 0.003533 0.004768 0.005124 0.14% Castro::finalize_do_advance() 10 0.001529 0.001938 0.002231 0.06% Amr::coarseTimeStep() 10 0.001053 0.001477 0.002146 0.06% Castro::buildMetrics() 1 0.001633 0.001707 0.001882 0.05% Amr::InitAmr() 1 0.0002748 0.0003 0.0003974 0.01% Amr::timeStep() 10 0.0001727 0.0002159 0.0003733 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002662 0.0002941 0.0003158 0.01% Castro::clean_state() 62 0.0001561 0.0001717 0.0001944 0.01% StateDataPhysBCFunct::() 41 0.0001006 0.0001186 0.0001307 0.00% DistributionMapping::LeastUsedCPUs() 1 7.729e-06 0.0001048 0.0001242 0.00% Castro::enforce_consistent_e() 1 8.138e-05 8.978e-05 0.0001071 0.00% Castro::do_new_sources() 10 4.304e-05 7.513e-05 9.76e-05 0.00% Castro::Castro() 1 5.434e-05 7.215e-05 9.547e-05 0.00% Castro::construct_old_source() 50 2.956e-05 7.569e-05 9.396e-05 0.00% FabArray::ParallelCopy() 41 5.854e-05 7.796e-05 9.286e-05 0.00% Castro::do_old_sources() 10 3.551e-05 6.938e-05 8.586e-05 0.00% Amr::FinalizeInit() 1 3.837e-06 1.433e-05 8.178e-05 0.00% Castro::construct_old_gravity() 10 3.808e-05 5.91e-05 8.01e-05 0.00% FillPatchSingleLevel 41 5.436e-05 6.685e-05 7.948e-05 0.00% Castro::subcycle_advance_ctu() 10 3.972e-05 5.811e-05 7.474e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 5.2e-05 6.994e-05 0.00% Castro::apply_source_to_state() 20 3.549e-05 5.026e-05 6.617e-05 0.00% FabArrayBase::getCPC() 41 4.681e-05 5.213e-05 6.363e-05 0.00% Castro::finalize_advance() 10 4.787e-05 5.189e-05 5.442e-05 0.00% Castro::construct_new_gravity() 10 3.446e-05 4.343e-05 5.097e-05 0.00% Castro::advance() 10 3.115e-05 4.095e-05 4.905e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.901e-05 2.599e-05 3.625e-05 0.00% FabArrayBase::CPC::define() 2 2.198e-05 2.735e-05 3.487e-05 0.00% Castro::check_for_nan() 20 1.993e-05 2.622e-05 3.411e-05 0.00% Amr::defBaseLevel() 1 1.771e-05 2.245e-05 3.141e-05 0.00% Castro::enforce_speed_limit() 62 2.366e-05 2.776e-05 3.024e-05 0.00% Castro::post_timestep() 10 1.488e-05 1.981e-05 2.551e-05 0.00% Castro::create_source_corrector() 10 6.457e-06 1.17e-05 1.753e-05 0.00% Gravity::swapTimeLevels() 10 7.142e-06 1.177e-05 1.438e-05 0.00% Gravity::set_mass_offset() 10 6.128e-06 9.275e-06 1.081e-05 0.00% Castro::computeNewDt() 9 7.42e-06 8.87e-06 9.953e-06 0.00% Castro::post_init() 1 3.386e-06 4.903e-06 9.85e-06 0.00% Amr::initSubcycle() 1 8.203e-06 9.052e-06 9.585e-06 0.00% Castro::FluxRegCrseInit 10 7.048e-06 8.008e-06 9.064e-06 0.00% Castro::retry_advance_ctu() 10 5.003e-06 6.368e-06 7.301e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.419e-06 4.973e-06 6.64e-06 0.00% Amr::InitializeInit() 1 1.967e-06 3e-06 5.829e-06 0.00% Castro::computeInitialDt() 2 3.423e-06 3.706e-06 4.123e-06 0.00% Castro::post_regrid() 1 1.48e-06 2.47e-06 3.468e-06 0.00% Amr::init() 1 1.929e-06 2.141e-06 2.757e-06 0.00% Castro::FluxRegFineAdd() 10 1.686e-06 2.101e-06 2.33e-06 0.00% Amr::initialInit() 1 1.175e-06 1.539e-06 1.958e-06 0.00% DistributionMapping::Distribute() 1 9.44e-07 1.136e-06 1.314e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.702 3.704 3.704 100.00% Amr::coarseTimeStep() 10 3.485 3.485 3.485 94.07% Amr::timeStep() 10 3.474 3.475 3.476 93.83% Castro::advance() 10 3.459 3.459 3.459 93.39% Castro::subcycle_advance_ctu() 10 3.383 3.385 3.389 91.50% Castro::do_advance_ctu() 10 3.383 3.385 3.389 91.50% Castro::construct_ctu_hydro_source() 10 2.061 2.417 2.553 68.92% Gravity::make_radial_gravity() 21 0.3378 0.3508 0.3742 10.10% Gravity::get_new_grav_vector() 11 0.2269 0.2315 0.2336 6.31% Castro::construct_old_gravity() 10 0.2006 0.211 0.2305 6.22% Gravity::get_old_grav_vector() 10 0.1996 0.2102 0.2298 6.20% Castro::construct_new_gravity() 10 0.2019 0.2058 0.2076 5.61% FillPatchIterator::Initialize 41 0.1915 0.1973 0.2075 5.60% Amr::init() 1 0.2009 0.201 0.2011 5.43% Castro::initialize_do_advance() 10 0.1613 0.1801 0.1884 5.09% Amr::initialInit() 1 0.1854 0.1856 0.1857 5.01% FillPatchSingleLevel 41 0.1388 0.1507 0.1788 4.83% Amr::InitializeInit() 1 0.06056 0.1035 0.1566 4.23% Amr::defBaseLevel() 1 0.06056 0.1035 0.1566 4.23% FabArray::ParallelCopy() 41 0.09447 0.109 0.1439 3.89% Castro::expand_state() 10 0.1233 0.1322 0.138 3.73% Castro::initData() 1 0.04336 0.08602 0.1378 3.72% Castro::estTimeStep() 21 0.02775 0.08124 0.1256 3.39% Amr::FinalizeInit() 1 0.029 0.08204 0.1251 3.38% Castro::clean_state() 62 0.1122 0.1175 0.1212 3.27% FabArray::ParallelCopy_finish() 41 0.04389 0.06352 0.1133 3.06% Castro::computeInitialDt() 2 0.001716 0.05483 0.0978 2.64% Castro::initialize_advance() 10 0.06915 0.07378 0.07576 2.05% FabArray::setVal() 143 0.06977 0.07206 0.07444 2.01% Castro::computeTemp() 63 0.0661 0.07001 0.07244 1.96% Castro::do_new_sources() 10 0.06232 0.06545 0.06642 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04832 0.0507 0.05251 1.42% Castro::reset_internal_energy(Fab) 1008 0.04803 0.0504 0.05222 1.41% FabArray::ParallelCopy_nowait() 41 0.03056 0.04543 0.05119 1.38% Castro::do_old_sources() 10 0.03658 0.04675 0.05062 1.37% StateDataPhysBCFunct::() 41 0.0333 0.04157 0.04725 1.28% StateData::FillBoundary(geom) 41 0.0332 0.04145 0.04712 1.27% Castro::normalize_species() 62 0.0404 0.0415 0.04284 1.16% Castro::construct_new_source() 50 0.02662 0.03028 0.03154 0.85% Gravity::interpolate_monopole_grav() 21 0.02564 0.02728 0.0279 0.75% Amr::writePlotFile() 2 0.02639 0.02648 0.02664 0.72% Castro::post_init() 1 0.02637 0.0265 0.02663 0.72% Castro::construct_new_gravity_source() 10 0.02148 0.02362 0.02494 0.67% VisMF::Write(FabArray) 2 0.01264 0.01339 0.01755 0.47% Castro::apply_source_to_state() 20 0.01132 0.01505 0.01669 0.45% MultiFab::Saxpy() 20 0.01128 0.015 0.01664 0.45% Castro::post_timestep() 10 0.01566 0.01596 0.01617 0.44% FabArray::setDomainBndry() 41 0.005128 0.01059 0.01289 0.35% Castro::construct_old_source() 50 0.005859 0.01061 0.01242 0.34% Castro::construct_old_gravity_source() 10 0.00583 0.01053 0.01234 0.33% Castro::Castro() 1 0.01109 0.01143 0.01225 0.33% Castro::check_for_nan() 20 0.01008 0.01124 0.01222 0.33% MultiFab::contains_nan() 20 0.01006 0.01122 0.01219 0.33% Castro::initMFs() 1 0.006867 0.007282 0.008485 0.23% Castro::computeNewDt() 9 0.007073 0.007085 0.0071 0.19% Castro::enforce_min_density() 62 0.006468 0.006791 0.007071 0.19% AmrLevel::AmrLevel(dm) 1 0.0057 0.005937 0.006485 0.18% StateData::define() 4 0.005681 0.005911 0.006456 0.17% Castro::swap_state_time_levels() 10 0.003533 0.004768 0.005124 0.14% Castro::finalize_do_advance() 10 0.001529 0.001938 0.002231 0.06% Castro::buildMetrics() 1 0.001751 0.00184 0.002044 0.06% Castro::post_regrid() 1 0.001582 0.001619 0.00168 0.05% Amr::InitAmr() 1 0.0002843 0.0003091 0.0004056 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.209e-05 0.0001109 0.0001319 0.00% DistributionMapping::LeastUsedCPUs() 1 7.729e-06 0.0001048 0.0001242 0.00% Castro::enforce_consistent_e() 1 8.138e-05 8.978e-05 0.0001071 0.00% FabArrayBase::getCPC() 41 7.318e-05 7.948e-05 9.85e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 5.2e-05 6.994e-05 0.00% Castro::finalize_advance() 10 5.67e-05 6.2e-05 6.548e-05 0.00% FabArrayBase::CPC::define() 2 2.198e-05 2.735e-05 3.487e-05 0.00% Castro::enforce_speed_limit() 62 2.366e-05 2.776e-05 3.024e-05 0.00% Castro::create_source_corrector() 10 6.457e-06 1.17e-05 1.753e-05 0.00% Gravity::swapTimeLevels() 10 7.142e-06 1.177e-05 1.438e-05 0.00% Gravity::set_mass_offset() 10 6.128e-06 9.275e-06 1.081e-05 0.00% Amr::initSubcycle() 1 8.203e-06 9.052e-06 9.585e-06 0.00% Castro::FluxRegCrseInit 10 7.048e-06 8.008e-06 9.064e-06 0.00% Castro::retry_advance_ctu() 10 5.003e-06 6.368e-06 7.301e-06 0.00% Castro::FluxRegFineAdd() 10 1.686e-06 2.101e-06 2.33e-06 0.00% DistributionMapping::Distribute() 1 9.44e-07 1.136e-06 1.314e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-20-g3082028e4287) finalized