MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-20-g3082028e4287) initialized Starting run at 05:39:37 UTC on 2022-10-24. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-20-g3082028e4 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015961005 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367843986 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345418717 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343386772 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344272976 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.351567232 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.345709258 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.337606153 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340405776 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337848992 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.338563407 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010569793 seconds Ending run at 05:39:41 UTC on 2022-10-24. Run time = 3.681562638 Run time without initialization = 3.47137162 Average number of zones advanced per microsecond: 0.755 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.679 ... 3.681 ... 3.682 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1342 2.4089 2.5234 68.54% Castro::do_advance_ctu() 10 0.02999 0.1453 0.4232 11.49% Gravity::make_radial_gravity() 21 0.3435 0.3549 0.3714 10.09% Castro::initData() 1 0.03953 0.08428 0.1391 3.78% Castro::estTimeStep() 21 0.03073 0.08364 0.1282 3.48% FabArray::ParallelCopy_finish() 41 0.03834 0.05583 0.09858 2.68% FabArray::setVal() 143 0.0643 0.07088 0.07353 2.00% Castro::reset_internal_energy(Fab) 1008 0.04843 0.05006 0.05129 1.39% FabArray::ParallelCopy_nowait() 41 0.032 0.0455 0.05042 1.37% StateData::FillBoundary(geom) 41 0.03769 0.04201 0.04676 1.27% Castro::normalize_species() 62 0.03976 0.04098 0.04173 1.13% FillPatchIterator::Initialize 41 0.02571 0.037 0.04107 1.12% Gravity::interpolate_monopole_grav() 21 0.02615 0.02743 0.02785 0.76% Castro::construct_new_gravity_source() 10 0.02322 0.02357 0.02397 0.65% Castro::expand_state() 10 0.01193 0.0199 0.02306 0.63% Castro::initialize_do_advance() 10 0.0156 0.01857 0.02018 0.55% Castro::computeTemp() 63 0.01811 0.01916 0.01992 0.54% MultiFab::Saxpy() 20 0.01149 0.01502 0.01646 0.45% VisMF::Write(FabArray) 2 0.01216 0.01314 0.01624 0.44% Amr::writePlotFile() 2 0.01052 0.01377 0.01465 0.40% Gravity::get_new_grav_vector() 11 0.01042 0.01201 0.01302 0.35% FabArray::setDomainBndry() 41 0.005965 0.01074 0.01271 0.35% MultiFab::contains_nan() 20 0.01059 0.01145 0.01235 0.34% Castro::construct_old_gravity_source() 10 0.007248 0.01081 0.01212 0.33% Castro::initialize_advance() 10 0.01059 0.01094 0.01163 0.32% Gravity::get_old_grav_vector() 10 0.006614 0.009734 0.0111 0.30% Castro::initMFs() 1 0.006745 0.007338 0.007936 0.22% main() 1 0.00434 0.006395 0.007484 0.20% Castro::enforce_min_density() 62 0.006225 0.006711 0.007222 0.20% Castro::construct_new_source() 50 0.005161 0.006626 0.007145 0.19% StateData::define() 4 0.005566 0.005962 0.006359 0.17% Castro::swap_state_time_levels() 10 0.003434 0.004692 0.005358 0.15% Amr::coarseTimeStep() 10 0.0008975 0.001475 0.002391 0.06% Castro::finalize_do_advance() 10 0.001632 0.001805 0.001948 0.05% Castro::buildMetrics() 1 0.001574 0.001692 0.00182 0.05% Amr::timeStep() 10 0.0001777 0.0002313 0.0004586 0.01% Amr::InitAmr() 1 0.0002799 0.000309 0.0004194 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002734 0.0002896 0.0003026 0.01% Castro::clean_state() 62 0.0001528 0.00017 0.0001958 0.01% DistributionMapping::LeastUsedCPUs() 1 8.234e-06 0.000123 0.0001534 0.00% StateDataPhysBCFunct::() 41 0.0001076 0.0001229 0.0001354 0.00% Castro::enforce_consistent_e() 1 7.852e-05 8.561e-05 0.0001033 0.00% Castro::construct_old_source() 50 3.934e-05 7.459e-05 9.325e-05 0.00% Amr::writeSmallPlotFile() 1 5.984e-05 7.209e-05 9.18e-05 0.00% Amr::FinalizeInit() 1 3.675e-06 1.591e-05 8.903e-05 0.00% Castro::do_old_sources() 10 4.239e-05 7.011e-05 8.844e-05 0.00% Castro::subcycle_advance_ctu() 10 5.038e-05 6.545e-05 8.477e-05 0.00% FabArray::ParallelCopy() 41 5.935e-05 7.682e-05 8.391e-05 0.00% Castro::do_new_sources() 10 4.208e-05 6.973e-05 8.269e-05 0.00% FillPatchSingleLevel 41 5.79e-05 6.852e-05 7.572e-05 0.00% Castro::Castro() 1 5.491e-05 6.167e-05 7.393e-05 0.00% FabArrayBase::getCPC() 41 4.943e-05 5.218e-05 6.385e-05 0.00% Castro::construct_old_gravity() 10 3.753e-05 5.635e-05 6.328e-05 0.00% Castro::finalize_advance() 10 4.647e-05 5.256e-05 5.831e-05 0.00% Castro::apply_source_to_state() 20 3.789e-05 4.818e-05 5.716e-05 0.00% Castro::construct_new_gravity() 10 3.635e-05 4.657e-05 5.296e-05 0.00% Castro::advance() 10 3.123e-05 4.139e-05 4.562e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.849e-05 2.382e-05 3.73e-05 0.00% FabArrayBase::CPC::define() 2 2.273e-05 2.779e-05 3.38e-05 0.00% Castro::enforce_speed_limit() 62 2.372e-05 2.726e-05 3.103e-05 0.00% Amr::defBaseLevel() 1 1.733e-05 2.031e-05 3.033e-05 0.00% Castro::check_for_nan() 20 2.272e-05 2.543e-05 2.795e-05 0.00% Castro::post_timestep() 10 1.513e-05 2.219e-05 2.766e-05 0.00% Castro::create_source_corrector() 10 8.576e-06 1.184e-05 1.612e-05 0.00% Gravity::swapTimeLevels() 10 7.374e-06 1.136e-05 1.423e-05 0.00% Gravity::set_mass_offset() 10 7.749e-06 1.027e-05 1.307e-05 0.00% Castro::FluxRegCrseInit 10 7.052e-06 8.961e-06 1.138e-05 0.00% Castro::computeNewDt() 9 7.436e-06 9.432e-06 1.1e-05 0.00% Amr::initSubcycle() 1 8.154e-06 9.186e-06 9.743e-06 0.00% Castro::retry_advance_ctu() 10 3.993e-06 6.461e-06 8.214e-06 0.00% Amr::InitializeInit() 1 2.17e-06 4.235e-06 6.689e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.554e-06 4.45e-06 6.587e-06 0.00% Castro::post_init() 1 3.164e-06 4.095e-06 5.707e-06 0.00% Castro::post_regrid() 1 1.77e-06 3.569e-06 5.189e-06 0.00% Castro::computeInitialDt() 2 3.365e-06 4.23e-06 5.093e-06 0.00% Amr::init() 1 1.813e-06 2.317e-06 3.24e-06 0.00% Castro::FluxRegFineAdd() 10 2.034e-06 2.297e-06 2.549e-06 0.00% Amr::initialInit() 1 1.216e-06 1.425e-06 1.791e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.067e-06 1.325e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.679 3.681 3.682 100.00% Amr::coarseTimeStep() 10 3.453 3.453 3.453 93.80% Amr::timeStep() 10 3.443 3.444 3.444 93.55% Castro::advance() 10 3.428 3.428 3.428 93.11% Castro::subcycle_advance_ctu() 10 3.352 3.355 3.361 91.30% Castro::do_advance_ctu() 10 3.352 3.355 3.361 91.30% Castro::construct_ctu_hydro_source() 10 2.134 2.409 2.523 68.54% Gravity::make_radial_gravity() 21 0.3435 0.3549 0.3714 10.09% Gravity::get_new_grav_vector() 11 0.2295 0.2322 0.234 6.35% Castro::construct_old_gravity() 10 0.204 0.214 0.2266 6.15% Gravity::get_old_grav_vector() 10 0.2031 0.2132 0.2259 6.14% Amr::init() 1 0.2096 0.2098 0.2098 5.70% Castro::construct_new_gravity() 10 0.2023 0.2043 0.2057 5.59% FillPatchIterator::Initialize 41 0.1836 0.1914 0.2019 5.48% Amr::initialInit() 1 0.1932 0.1935 0.1937 5.26% Castro::initialize_do_advance() 10 0.1686 0.1767 0.1836 4.99% FillPatchSingleLevel 41 0.1311 0.1437 0.1698 4.61% Amr::InitializeInit() 1 0.05966 0.1056 0.162 4.40% Amr::defBaseLevel() 1 0.05966 0.1056 0.162 4.40% Castro::initData() 1 0.04346 0.08824 0.1435 3.90% Amr::FinalizeInit() 1 0.03172 0.08792 0.1338 3.63% Castro::expand_state() 10 0.1228 0.1275 0.1334 3.62% FabArray::ParallelCopy() 41 0.08779 0.1015 0.132 3.58% Castro::estTimeStep() 21 0.03073 0.08364 0.1282 3.48% Castro::clean_state() 62 0.112 0.1164 0.1185 3.22% Castro::computeInitialDt() 2 0.001962 0.05837 0.1043 2.83% FabArray::ParallelCopy_finish() 41 0.03834 0.05583 0.09858 2.68% Castro::initialize_advance() 10 0.06638 0.07267 0.0755 2.05% FabArray::setVal() 143 0.0643 0.07088 0.07353 2.00% Castro::computeTemp() 63 0.06683 0.0695 0.07116 1.93% Castro::do_new_sources() 10 0.06356 0.06512 0.06607 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04872 0.05035 0.05158 1.40% Castro::reset_internal_energy(Fab) 1008 0.04843 0.05006 0.05129 1.39% FabArray::ParallelCopy_nowait() 41 0.03208 0.04558 0.05049 1.37% Castro::do_old_sources() 10 0.03863 0.04693 0.0501 1.36% StateDataPhysBCFunct::() 41 0.0378 0.04214 0.0469 1.27% StateData::FillBoundary(geom) 41 0.03769 0.04201 0.04676 1.27% Castro::normalize_species() 62 0.03976 0.04098 0.04173 1.13% Castro::construct_new_source() 50 0.02846 0.0302 0.03106 0.84% Castro::post_init() 1 0.02865 0.02883 0.02918 0.79% Gravity::interpolate_monopole_grav() 21 0.02615 0.02743 0.02785 0.76% Amr::writePlotFile() 2 0.02669 0.02692 0.02719 0.74% Castro::construct_new_gravity_source() 10 0.02322 0.02357 0.02397 0.65% Castro::apply_source_to_state() 20 0.01153 0.01507 0.01651 0.45% MultiFab::Saxpy() 20 0.01149 0.01502 0.01646 0.45% VisMF::Write(FabArray) 2 0.01216 0.01314 0.01624 0.44% Castro::post_timestep() 10 0.01476 0.01563 0.01603 0.44% FabArray::setDomainBndry() 41 0.005965 0.01074 0.01271 0.35% Castro::check_for_nan() 20 0.01062 0.01147 0.01238 0.34% MultiFab::contains_nan() 20 0.01059 0.01145 0.01235 0.34% Castro::construct_old_source() 50 0.007287 0.01089 0.0122 0.33% Castro::construct_old_gravity_source() 10 0.007248 0.01081 0.01212 0.33% Castro::Castro() 1 0.0104 0.01118 0.01196 0.32% Castro::initMFs() 1 0.006745 0.007338 0.007936 0.22% Castro::enforce_min_density() 62 0.006225 0.006711 0.007222 0.20% Castro::computeNewDt() 9 0.007162 0.00717 0.007177 0.19% AmrLevel::AmrLevel(dm) 1 0.005585 0.005986 0.006397 0.17% StateData::define() 4 0.005566 0.005962 0.006359 0.17% Castro::swap_state_time_levels() 10 0.003434 0.004692 0.005358 0.15% Castro::buildMetrics() 1 0.001689 0.001826 0.001979 0.05% Castro::finalize_do_advance() 10 0.001632 0.001805 0.001948 0.05% Castro::post_regrid() 1 0.001585 0.001718 0.001941 0.05% Amr::InitAmr() 1 0.0002888 0.0003182 0.0004276 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.272e-05 0.0001285 0.0001614 0.00% DistributionMapping::LeastUsedCPUs() 1 8.234e-06 0.000123 0.0001534 0.00% Castro::enforce_consistent_e() 1 7.852e-05 8.561e-05 0.0001033 0.00% FabArrayBase::getCPC() 41 7.504e-05 7.997e-05 9.766e-05 0.00% Amr::writeSmallPlotFile() 1 5.984e-05 7.209e-05 9.18e-05 0.00% Castro::finalize_advance() 10 5.641e-05 6.381e-05 7.21e-05 0.00% FabArrayBase::CPC::define() 2 2.273e-05 2.779e-05 3.38e-05 0.00% Castro::enforce_speed_limit() 62 2.372e-05 2.726e-05 3.103e-05 0.00% Castro::create_source_corrector() 10 8.576e-06 1.184e-05 1.612e-05 0.00% Gravity::swapTimeLevels() 10 7.374e-06 1.136e-05 1.423e-05 0.00% Gravity::set_mass_offset() 10 7.749e-06 1.027e-05 1.307e-05 0.00% Castro::FluxRegCrseInit 10 7.052e-06 8.961e-06 1.138e-05 0.00% Amr::initSubcycle() 1 8.154e-06 9.186e-06 9.743e-06 0.00% Castro::retry_advance_ctu() 10 3.993e-06 6.461e-06 8.214e-06 0.00% Castro::FluxRegFineAdd() 10 2.034e-06 2.297e-06 2.549e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.067e-06 1.325e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-20-g3082028e4287) finalized