MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-20-g3082028e4287) initialized Starting run at 05:39:45 UTC on 2022-10-25. Successfully read inputs file ... Castro git describe: 22.09-1-g65b273ad0 AMReX git describe: 22.10-20-g3082028e4 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015714145 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.37241114 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.349388654 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.346443315 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.345858316 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.357008342 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.348734347 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341084785 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.341343232 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.342429327 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.342611712 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010504901 seconds Ending run at 05:39:49 UTC on 2022-10-25. Run time = 3.715818022 Run time without initialization = 3.505874004 Average number of zones advanced per microsecond: 0.748 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.715 ... 3.716 ... 3.716 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1536 2.4440 2.5530 68.71% Castro::do_advance_ctu() 10 0.02893 0.1401 0.4345 11.69% Gravity::make_radial_gravity() 21 0.3367 0.3492 0.3695 9.94% Castro::initData() 1 0.03916 0.08356 0.1387 3.73% Castro::estTimeStep() 21 0.02955 0.08744 0.1356 3.65% FabArray::ParallelCopy_finish() 41 0.03867 0.05627 0.1032 2.78% FabArray::setVal() 143 0.06541 0.07142 0.07429 2.00% FabArray::ParallelCopy_nowait() 41 0.03255 0.04684 0.05277 1.42% Castro::reset_internal_energy(Fab) 1008 0.04852 0.05036 0.05219 1.40% StateData::FillBoundary(geom) 41 0.0348 0.04249 0.04678 1.26% Castro::normalize_species() 62 0.04011 0.04115 0.04175 1.12% FillPatchIterator::Initialize 41 0.02564 0.03726 0.0413 1.11% Gravity::interpolate_monopole_grav() 21 0.02662 0.02769 0.02806 0.76% Castro::construct_new_gravity_source() 10 0.02321 0.02373 0.02444 0.66% Castro::expand_state() 10 0.01341 0.02025 0.02304 0.62% Castro::computeTemp() 63 0.01842 0.01914 0.01991 0.54% Castro::initialize_do_advance() 10 0.01573 0.0185 0.01929 0.52% VisMF::Write(FabArray) 2 0.01234 0.01335 0.01743 0.47% MultiFab::Saxpy() 20 0.01149 0.01544 0.01737 0.47% Amr::writePlotFile() 2 0.00904 0.01308 0.01401 0.38% Gravity::get_new_grav_vector() 11 0.01069 0.01235 0.01327 0.36% FabArray::setDomainBndry() 41 0.005593 0.01096 0.01304 0.35% MultiFab::contains_nan() 20 0.01041 0.0117 0.01269 0.34% Castro::construct_old_gravity_source() 10 0.007327 0.01093 0.01235 0.33% Castro::initialize_advance() 10 0.01079 0.01103 0.01155 0.31% Gravity::get_old_grav_vector() 10 0.006765 0.009989 0.01135 0.31% Castro::initMFs() 1 0.00671 0.0078 0.01034 0.28% StateData::define() 4 0.005548 0.006324 0.008202 0.22% Castro::construct_new_source() 50 0.005002 0.006747 0.007406 0.20% main() 1 0.006468 0.00693 0.007283 0.20% Castro::enforce_min_density() 62 0.006356 0.006736 0.007097 0.19% Castro::swap_state_time_levels() 10 0.003458 0.004638 0.004814 0.13% Amr::coarseTimeStep() 10 0.001143 0.001958 0.002496 0.07% Castro::buildMetrics() 1 0.001579 0.001808 0.002348 0.06% Castro::finalize_do_advance() 10 0.001615 0.001769 0.002022 0.05% Amr::InitAmr() 1 0.0002855 0.0003694 0.0005212 0.01% Amr::timeStep() 10 0.0001736 0.0002272 0.0003712 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002805 0.0002875 0.0003 0.01% DistributionMapping::LeastUsedCPUs() 1 7.04e-06 0.0001865 0.0002788 0.01% Castro::clean_state() 62 0.0001567 0.0001693 0.0001849 0.00% StateDataPhysBCFunct::() 41 9.785e-05 0.0001203 0.0001377 0.00% Castro::enforce_consistent_e() 1 7.668e-05 9.02e-05 0.0001142 0.00% Castro::construct_old_source() 50 4.377e-05 7.759e-05 9.438e-05 0.00% Castro::do_new_sources() 10 4.991e-05 7.23e-05 9.255e-05 0.00% FabArray::ParallelCopy() 41 5.962e-05 7.773e-05 9.072e-05 0.00% Castro::do_old_sources() 10 4.694e-05 7.399e-05 9.058e-05 0.00% Amr::FinalizeInit() 1 3.627e-06 1.475e-05 8.649e-05 0.00% Castro::subcycle_advance_ctu() 10 4.688e-05 6.644e-05 8.158e-05 0.00% Castro::Castro() 1 5.497e-05 6.43e-05 7.675e-05 0.00% Amr::writeSmallPlotFile() 1 2.46e-05 5.945e-05 7.39e-05 0.00% FillPatchSingleLevel 41 5.762e-05 6.441e-05 7.246e-05 0.00% Castro::construct_old_gravity() 10 3.955e-05 5.329e-05 6.637e-05 0.00% FabArrayBase::getCPC() 41 4.899e-05 5.37e-05 6.038e-05 0.00% Castro::apply_source_to_state() 20 3.702e-05 5.046e-05 5.83e-05 0.00% Castro::finalize_advance() 10 5.077e-05 5.375e-05 5.777e-05 0.00% Castro::construct_new_gravity() 10 3.515e-05 4.576e-05 5.127e-05 0.00% Castro::advance() 10 2.857e-05 4.089e-05 5.083e-05 0.00% FabArrayBase::CPC::define() 2 2.321e-05 2.708e-05 3.591e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.208e-05 2.443e-05 3.551e-05 0.00% Amr::defBaseLevel() 1 1.781e-05 2.52e-05 3.252e-05 0.00% Castro::check_for_nan() 20 2.095e-05 2.59e-05 3.121e-05 0.00% Castro::enforce_speed_limit() 62 2.275e-05 2.781e-05 3.067e-05 0.00% Castro::post_timestep() 10 1.328e-05 2.301e-05 2.78e-05 0.00% Castro::computeInitialDt() 2 3.5e-06 1.846e-05 2.125e-05 0.00% Castro::create_source_corrector() 10 8.175e-06 1.151e-05 1.595e-05 0.00% Gravity::swapTimeLevels() 10 8.743e-06 1.231e-05 1.475e-05 0.00% Amr::initSubcycle() 1 8.378e-06 1.092e-05 1.475e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.79e-06 6.935e-06 1.462e-05 0.00% Gravity::set_mass_offset() 10 6.568e-06 9.953e-06 1.262e-05 0.00% Castro::FluxRegCrseInit 10 6.174e-06 9.137e-06 1.161e-05 0.00% Castro::computeNewDt() 9 7.536e-06 9.477e-06 1.073e-05 0.00% Amr::InitializeInit() 1 3.213e-06 6.179e-06 1.006e-05 0.00% Castro::retry_advance_ctu() 10 4.472e-06 6.542e-06 7.754e-06 0.00% Castro::post_init() 1 2.891e-06 3.991e-06 5.193e-06 0.00% Castro::post_regrid() 1 1.882e-06 3.093e-06 4.753e-06 0.00% Amr::init() 1 2.016e-06 2.481e-06 3.32e-06 0.00% Castro::FluxRegFineAdd() 10 2.094e-06 2.383e-06 2.835e-06 0.00% Amr::initialInit() 1 1.371e-06 1.651e-06 1.93e-06 0.00% DistributionMapping::Distribute() 1 9.09e-07 1.327e-06 1.613e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.715 3.716 3.716 100.00% Amr::coarseTimeStep() 10 3.488 3.488 3.488 93.87% Amr::timeStep() 10 3.478 3.478 3.479 93.62% Castro::advance() 10 3.462 3.462 3.462 93.17% Castro::subcycle_advance_ctu() 10 3.385 3.389 3.397 91.43% Castro::do_advance_ctu() 10 3.385 3.388 3.397 91.42% Castro::construct_ctu_hydro_source() 10 2.154 2.444 2.553 68.71% Gravity::make_radial_gravity() 21 0.3367 0.3492 0.3695 9.94% Gravity::get_new_grav_vector() 11 0.2273 0.2302 0.2318 6.24% Castro::construct_old_gravity() 10 0.201 0.212 0.2277 6.13% Gravity::get_old_grav_vector() 10 0.2 0.2111 0.227 6.11% Amr::init() 1 0.2093 0.2094 0.2095 5.64% Castro::construct_new_gravity() 10 0.2027 0.2051 0.2062 5.55% FillPatchIterator::Initialize 41 0.1872 0.1942 0.2021 5.44% Amr::initialInit() 1 0.1935 0.1936 0.1938 5.21% Castro::initialize_do_advance() 10 0.1685 0.1783 0.1851 4.98% FillPatchSingleLevel 41 0.1336 0.1459 0.1709 4.60% Amr::InitializeInit() 1 0.05953 0.1057 0.165 4.44% Amr::defBaseLevel() 1 0.05952 0.1057 0.165 4.44% Castro::initData() 1 0.04299 0.08741 0.1423 3.83% FabArray::ParallelCopy() 41 0.08979 0.1033 0.1359 3.66% Castro::estTimeStep() 21 0.02955 0.08744 0.1356 3.65% Castro::expand_state() 10 0.1229 0.1291 0.1349 3.63% Amr::FinalizeInit() 1 0.02849 0.0879 0.1341 3.61% Castro::clean_state() 62 0.113 0.1169 0.12 3.23% Castro::computeInitialDt() 2 0.001618 0.06114 0.1074 2.89% FabArray::ParallelCopy_finish() 41 0.03867 0.05627 0.1032 2.78% Castro::initialize_advance() 10 0.06453 0.07328 0.07653 2.06% FabArray::setVal() 143 0.06541 0.07142 0.07429 2.00% Castro::computeTemp() 63 0.06736 0.06978 0.0724 1.95% Castro::do_new_sources() 10 0.06383 0.06571 0.06664 1.79% FabArray::ParallelCopy_nowait() 41 0.03262 0.04692 0.05285 1.42% Castro::reset_internal_energy(MultiFab) 63 0.04881 0.05064 0.05249 1.41% Castro::reset_internal_energy(Fab) 1008 0.04852 0.05036 0.05219 1.40% Castro::do_old_sources() 10 0.0387 0.04728 0.05044 1.36% StateDataPhysBCFunct::() 41 0.0349 0.04261 0.04691 1.26% StateData::FillBoundary(geom) 41 0.0348 0.04249 0.04678 1.26% Castro::normalize_species() 62 0.04011 0.04115 0.04175 1.12% Castro::construct_new_source() 50 0.02862 0.03047 0.03185 0.86% Gravity::interpolate_monopole_grav() 21 0.02662 0.02769 0.02806 0.76% Amr::writePlotFile() 2 0.02624 0.02644 0.0266 0.72% Castro::post_init() 1 0.02588 0.02605 0.02623 0.71% Castro::construct_new_gravity_source() 10 0.02321 0.02373 0.02444 0.66% VisMF::Write(FabArray) 2 0.01234 0.01335 0.01743 0.47% Castro::apply_source_to_state() 20 0.01153 0.01549 0.01743 0.47% MultiFab::Saxpy() 20 0.01149 0.01544 0.01737 0.47% Castro::post_timestep() 10 0.01563 0.01598 0.01652 0.44% Castro::Castro() 1 0.01063 0.01171 0.01452 0.39% FabArray::setDomainBndry() 41 0.005593 0.01096 0.01304 0.35% Castro::check_for_nan() 20 0.01043 0.01172 0.01271 0.34% MultiFab::contains_nan() 20 0.01041 0.0117 0.01269 0.34% Castro::construct_old_source() 50 0.007371 0.01101 0.01244 0.33% Castro::construct_old_gravity_source() 10 0.007327 0.01093 0.01235 0.33% Castro::initMFs() 1 0.00671 0.0078 0.01034 0.28% AmrLevel::AmrLevel(dm) 1 0.005579 0.006348 0.008233 0.22% StateData::define() 4 0.005548 0.006324 0.008202 0.22% Castro::enforce_min_density() 62 0.006356 0.006736 0.007097 0.19% Castro::computeNewDt() 9 0.007071 0.007078 0.007086 0.19% Castro::swap_state_time_levels() 10 0.003458 0.004638 0.004814 0.13% Castro::buildMetrics() 1 0.001701 0.001954 0.002564 0.07% Castro::finalize_do_advance() 10 0.001615 0.001769 0.002022 0.05% Castro::post_regrid() 1 0.001565 0.001645 0.001707 0.05% Amr::InitAmr() 1 0.0002947 0.0003803 0.0005347 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.261e-05 0.0001948 0.0002941 0.01% DistributionMapping::LeastUsedCPUs() 1 7.04e-06 0.0001865 0.0002788 0.01% Castro::enforce_consistent_e() 1 7.668e-05 9.02e-05 0.0001142 0.00% FabArrayBase::getCPC() 41 7.401e-05 8.077e-05 8.999e-05 0.00% Amr::writeSmallPlotFile() 1 2.46e-05 5.945e-05 7.39e-05 0.00% Castro::finalize_advance() 10 6.092e-05 6.527e-05 6.981e-05 0.00% FabArrayBase::CPC::define() 2 2.321e-05 2.708e-05 3.591e-05 0.00% Castro::enforce_speed_limit() 62 2.275e-05 2.781e-05 3.067e-05 0.00% Castro::create_source_corrector() 10 8.175e-06 1.151e-05 1.595e-05 0.00% Gravity::swapTimeLevels() 10 8.743e-06 1.231e-05 1.475e-05 0.00% Amr::initSubcycle() 1 8.378e-06 1.092e-05 1.475e-05 0.00% Gravity::set_mass_offset() 10 6.568e-06 9.953e-06 1.262e-05 0.00% Castro::FluxRegCrseInit 10 6.174e-06 9.137e-06 1.161e-05 0.00% Castro::retry_advance_ctu() 10 4.472e-06 6.542e-06 7.754e-06 0.00% Castro::FluxRegFineAdd() 10 2.094e-06 2.383e-06 2.835e-06 0.00% DistributionMapping::Distribute() 1 9.09e-07 1.327e-06 1.613e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-20-g3082028e4287) finalized