MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-20-g3082028e4287) initialized Starting run at 05:39:43 UTC on 2022-10-26. Successfully read inputs file ... Castro git describe: 22.09-2-geb5c4b665 AMReX git describe: 22.10-20-g3082028e4 Microphysics git describe: 22.10-4-g1dbcf8c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015630632 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.372005075 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344582762 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342423702 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343832791 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.351645693 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34730908 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.336111285 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.337463367 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33807541 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.33991393 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010485762 seconds Ending run at 05:39:47 UTC on 2022-10-26. Run time = 3.683607142 Run time without initialization = 3.471512132 Average number of zones advanced per microsecond: 0.755 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.681 ... 3.683 ... 3.684 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1911 2.4323 2.5133 68.23% Castro::do_advance_ctu() 10 0.04316 0.1261 0.3713 10.08% Gravity::make_radial_gravity() 21 0.3359 0.3492 0.3664 9.95% Castro::initData() 1 0.03914 0.08827 0.1406 3.82% Castro::estTimeStep() 21 0.02866 0.08332 0.1391 3.78% FabArray::ParallelCopy_finish() 41 0.03971 0.05864 0.1072 2.91% FabArray::setVal() 143 0.06627 0.07043 0.07224 1.96% Castro::reset_internal_energy(Fab) 1008 0.04833 0.05015 0.05131 1.39% FabArray::ParallelCopy_nowait() 41 0.0313 0.04517 0.04998 1.36% StateData::FillBoundary(geom) 41 0.03723 0.04164 0.04611 1.25% Castro::normalize_species() 62 0.04038 0.04124 0.04183 1.14% FillPatchIterator::Initialize 41 0.02465 0.03648 0.04068 1.10% Gravity::interpolate_monopole_grav() 21 0.02712 0.02762 0.02789 0.76% Castro::construct_new_gravity_source() 10 0.0215 0.02338 0.02393 0.65% Castro::expand_state() 10 0.009997 0.01809 0.02092 0.57% Castro::initialize_do_advance() 10 0.01041 0.01759 0.0202 0.55% Castro::computeTemp() 63 0.01779 0.01917 0.02002 0.54% MultiFab::Saxpy() 20 0.01145 0.01491 0.0164 0.45% VisMF::Write(FabArray) 2 0.01246 0.01306 0.01571 0.43% Amr::writePlotFile() 2 0.01063 0.01322 0.01407 0.38% MultiFab::contains_nan() 20 0.01065 0.01182 0.01316 0.36% Gravity::get_new_grav_vector() 11 0.01042 0.01201 0.01312 0.36% FabArray::setDomainBndry() 41 0.004944 0.01044 0.01242 0.34% Castro::construct_old_gravity_source() 10 0.005835 0.01057 0.01211 0.33% Castro::initialize_advance() 10 0.01062 0.01095 0.01176 0.32% Gravity::get_old_grav_vector() 10 0.006389 0.009548 0.01092 0.30% Castro::initMFs() 1 0.006658 0.008303 0.009999 0.27% StateData::define() 4 0.005575 0.006885 0.008191 0.22% main() 1 0.004568 0.006448 0.007387 0.20% Castro::construct_new_source() 50 0.005262 0.006618 0.007172 0.19% Castro::enforce_min_density() 62 0.006205 0.006672 0.007001 0.19% Castro::swap_state_time_levels() 10 0.003434 0.004614 0.004818 0.13% Amr::coarseTimeStep() 10 0.0008767 0.001687 0.003299 0.09% Castro::buildMetrics() 1 0.00158 0.001963 0.002357 0.06% Castro::finalize_do_advance() 10 0.0006574 0.00154 0.001937 0.05% DistributionMapping::LeastUsedCPUs() 1 1.001e-05 0.0004814 0.0006974 0.02% Amr::InitAmr() 1 0.00026 0.0004151 0.0006298 0.02% Amr::timeStep() 10 0.0001722 0.0002285 0.0004066 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002842 0.0002928 0.0003056 0.01% Castro::clean_state() 62 0.0001622 0.0001767 0.0001893 0.01% StateDataPhysBCFunct::() 41 0.0001136 0.0001291 0.0001461 0.00% Amr::FinalizeInit() 1 4.011e-06 1.859e-05 0.0001142 0.00% Castro::enforce_consistent_e() 1 8.454e-05 9.145e-05 0.0001024 0.00% Castro::construct_old_source() 50 3.246e-05 7.758e-05 9.819e-05 0.00% Castro::do_new_sources() 10 4.876e-05 7.492e-05 9.214e-05 0.00% Castro::Castro() 1 5.908e-05 6.905e-05 8.674e-05 0.00% FabArray::ParallelCopy() 41 7.086e-05 8.013e-05 8.576e-05 0.00% Amr::writeSmallPlotFile() 1 2.483e-05 5.954e-05 8.066e-05 0.00% Castro::do_old_sources() 10 4.386e-05 6.999e-05 8.065e-05 0.00% Castro::subcycle_advance_ctu() 10 4.905e-05 5.843e-05 7.398e-05 0.00% FillPatchSingleLevel 41 6.163e-05 6.807e-05 7.366e-05 0.00% FabArrayBase::getCPC() 41 5.235e-05 5.729e-05 6.554e-05 0.00% Castro::construct_old_gravity() 10 3.659e-05 5.298e-05 6.485e-05 0.00% Castro::apply_source_to_state() 20 4.159e-05 4.981e-05 5.949e-05 0.00% Castro::finalize_advance() 10 4.915e-05 5.306e-05 5.565e-05 0.00% Castro::construct_new_gravity() 10 4.106e-05 4.659e-05 5.131e-05 0.00% Castro::advance() 10 3.465e-05 4.151e-05 4.665e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.478e-05 2.573e-05 3.974e-05 0.00% Amr::defBaseLevel() 1 1.873e-05 2.369e-05 3.303e-05 0.00% Castro::enforce_speed_limit() 62 2.454e-05 2.768e-05 3.141e-05 0.00% FabArrayBase::CPC::define() 2 2.318e-05 2.562e-05 2.91e-05 0.00% Castro::check_for_nan() 20 2.324e-05 2.583e-05 2.845e-05 0.00% Castro::post_timestep() 10 1.459e-05 2.044e-05 2.584e-05 0.00% Amr::initSubcycle() 1 7.939e-06 1.34e-05 2.301e-05 0.00% Gravity::swapTimeLevels() 10 6.693e-06 1.221e-05 1.523e-05 0.00% Castro::create_source_corrector() 10 6.534e-06 1.173e-05 1.476e-05 0.00% Gravity::set_mass_offset() 10 7.496e-06 1.025e-05 1.231e-05 0.00% Castro::computeNewDt() 9 7.444e-06 9.453e-06 1.162e-05 0.00% Castro::FluxRegCrseInit 10 5.994e-06 8.513e-06 1.065e-05 0.00% Castro::retry_advance_ctu() 10 3.632e-06 6.218e-06 7.956e-06 0.00% Amr::InitializeInit() 1 2.244e-06 3.454e-06 7.068e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.881e-06 4.566e-06 5.39e-06 0.00% Castro::post_regrid() 1 2.076e-06 3.005e-06 5.168e-06 0.00% Castro::post_init() 1 3.245e-06 4.096e-06 5.01e-06 0.00% Castro::computeInitialDt() 2 3.018e-06 3.889e-06 4.488e-06 0.00% Castro::FluxRegFineAdd() 10 1.868e-06 2.424e-06 3.591e-06 0.00% Amr::init() 1 2.152e-06 2.519e-06 3.308e-06 0.00% Amr::initialInit() 1 1.403e-06 1.661e-06 1.988e-06 0.00% DistributionMapping::Distribute() 1 9.21e-07 1.291e-06 1.501e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.681 3.683 3.684 100.00% Amr::coarseTimeStep() 10 3.454 3.454 3.454 93.77% Amr::timeStep() 10 3.443 3.444 3.445 93.52% Castro::advance() 10 3.427 3.428 3.429 93.08% Castro::subcycle_advance_ctu() 10 3.353 3.356 3.361 91.23% Castro::do_advance_ctu() 10 3.353 3.355 3.36 91.23% Castro::construct_ctu_hydro_source() 10 2.191 2.432 2.513 68.23% Gravity::make_radial_gravity() 21 0.3359 0.3492 0.3664 9.95% Gravity::get_new_grav_vector() 11 0.2256 0.2291 0.2308 6.27% Castro::construct_old_gravity() 10 0.1988 0.2113 0.2241 6.08% Gravity::get_old_grav_vector() 10 0.198 0.2105 0.2234 6.07% Amr::init() 1 0.2109 0.2114 0.2116 5.74% FillPatchIterator::Initialize 41 0.1833 0.1927 0.2074 5.63% Castro::construct_new_gravity() 10 0.2015 0.2042 0.2055 5.58% Amr::initialInit() 1 0.1951 0.1956 0.196 5.32% Castro::initialize_do_advance() 10 0.1666 0.1754 0.1838 4.99% FillPatchSingleLevel 41 0.131 0.1458 0.1778 4.83% Amr::InitializeInit() 1 0.05983 0.1119 0.1676 4.55% Amr::defBaseLevel() 1 0.05983 0.1119 0.1676 4.55% Castro::initData() 1 0.04305 0.09204 0.1442 3.91% Castro::estTimeStep() 21 0.02866 0.08332 0.1391 3.78% FabArray::ParallelCopy() 41 0.08942 0.104 0.1387 3.76% Amr::FinalizeInit() 1 0.02799 0.08375 0.136 3.69% Castro::expand_state() 10 0.1223 0.1273 0.134 3.64% Castro::clean_state() 62 0.113 0.1168 0.119 3.23% Castro::computeInitialDt() 2 0.001607 0.05733 0.1096 2.98% FabArray::ParallelCopy_finish() 41 0.03971 0.05864 0.1072 2.91% Castro::initialize_advance() 10 0.06747 0.07257 0.07538 2.05% FabArray::setVal() 143 0.06627 0.07043 0.07224 1.96% Castro::computeTemp() 63 0.0672 0.06961 0.07162 1.94% Castro::do_new_sources() 10 0.06282 0.06486 0.0655 1.78% Castro::reset_internal_energy(MultiFab) 63 0.04862 0.05044 0.0516 1.40% Castro::reset_internal_energy(Fab) 1008 0.04833 0.05015 0.05131 1.39% FabArray::ParallelCopy_nowait() 41 0.03138 0.04526 0.05006 1.36% Castro::do_old_sources() 10 0.03767 0.04674 0.04991 1.35% StateDataPhysBCFunct::() 41 0.03735 0.04177 0.04625 1.26% StateData::FillBoundary(geom) 41 0.03723 0.04164 0.04611 1.25% Castro::normalize_species() 62 0.04038 0.04124 0.04183 1.14% Castro::construct_new_source() 50 0.02679 0.03 0.03093 0.84% Gravity::interpolate_monopole_grav() 21 0.02712 0.02762 0.02789 0.76% Amr::writePlotFile() 2 0.02613 0.02628 0.02653 0.72% Castro::post_init() 1 0.02556 0.02576 0.02595 0.70% Castro::construct_new_gravity_source() 10 0.0215 0.02338 0.02393 0.65% Castro::apply_source_to_state() 20 0.01149 0.01496 0.01645 0.45% MultiFab::Saxpy() 20 0.01145 0.01491 0.0164 0.45% Castro::post_timestep() 10 0.01513 0.01583 0.01626 0.44% VisMF::Write(FabArray) 2 0.01246 0.01306 0.01571 0.43% Castro::Castro() 1 0.01021 0.01241 0.01467 0.40% Castro::check_for_nan() 20 0.01067 0.01184 0.01318 0.36% MultiFab::contains_nan() 20 0.01065 0.01182 0.01316 0.36% FabArray::setDomainBndry() 41 0.004944 0.01044 0.01242 0.34% Castro::construct_old_source() 50 0.005868 0.01065 0.01219 0.33% Castro::construct_old_gravity_source() 10 0.005835 0.01057 0.01211 0.33% Castro::initMFs() 1 0.006658 0.008303 0.009999 0.27% AmrLevel::AmrLevel(dm) 1 0.00559 0.006911 0.008223 0.22% StateData::define() 4 0.005575 0.006885 0.008191 0.22% Castro::computeNewDt() 9 0.007217 0.007228 0.007241 0.20% Castro::enforce_min_density() 62 0.006205 0.006672 0.007001 0.19% Castro::swap_state_time_levels() 10 0.003434 0.004614 0.004818 0.13% Castro::buildMetrics() 1 0.001689 0.00212 0.002558 0.07% Castro::finalize_do_advance() 10 0.0006574 0.00154 0.001937 0.05% Castro::post_regrid() 1 0.001514 0.001582 0.001648 0.04% DistributionMapping::SFCProcessorMapDoIt() 1 1.598e-05 0.0004873 0.0007043 0.02% DistributionMapping::LeastUsedCPUs() 1 1.001e-05 0.0004814 0.0006974 0.02% Amr::InitAmr() 1 0.0002689 0.0004285 0.0006528 0.02% Castro::enforce_consistent_e() 1 8.454e-05 9.145e-05 0.0001024 0.00% FabArrayBase::getCPC() 41 7.657e-05 8.291e-05 9.209e-05 0.00% Amr::writeSmallPlotFile() 1 2.483e-05 5.954e-05 8.066e-05 0.00% Castro::finalize_advance() 10 5.765e-05 6.4e-05 6.839e-05 0.00% Castro::enforce_speed_limit() 62 2.454e-05 2.768e-05 3.141e-05 0.00% FabArrayBase::CPC::define() 2 2.318e-05 2.562e-05 2.91e-05 0.00% Amr::initSubcycle() 1 7.939e-06 1.34e-05 2.301e-05 0.00% Gravity::swapTimeLevels() 10 6.693e-06 1.221e-05 1.523e-05 0.00% Castro::create_source_corrector() 10 6.534e-06 1.173e-05 1.476e-05 0.00% Gravity::set_mass_offset() 10 7.496e-06 1.025e-05 1.231e-05 0.00% Castro::FluxRegCrseInit 10 5.994e-06 8.513e-06 1.065e-05 0.00% Castro::retry_advance_ctu() 10 3.632e-06 6.218e-06 7.956e-06 0.00% Castro::FluxRegFineAdd() 10 1.868e-06 2.424e-06 3.591e-06 0.00% DistributionMapping::Distribute() 1 9.21e-07 1.291e-06 1.501e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-20-g3082028e4287) finalized