MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-24-g3ec07681574a) initialized Starting run at 23:21:14 UTC on 2022-10-27. Successfully read inputs file ... Castro git describe: 22.09-6-g2755a67c3 AMReX git describe: 22.10-24-g3ec076815 Microphysics git describe: 22.10-5-g820f45d5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016561539 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356059653 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.343066301 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342998697 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.342665447 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.351703887 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.349871731 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338376447 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338079323 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338367652 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337873836 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010562809 seconds Ending run at 23:21:17 UTC on 2022-10-27. Run time = 3.644140219 Run time without initialization = 3.457241337 Average number of zones advanced per microsecond: 0.758 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.642 ... 3.643 ... 3.644 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1067 2.4002 2.5087 68.84% Castro::do_advance_ctu() 10 0.03276 0.1414 0.4378 12.01% Gravity::make_radial_gravity() 21 0.3346 0.3498 0.3766 10.33% Castro::initData() 1 0.03945 0.07961 0.1199 3.29% Castro::estTimeStep() 21 0.02623 0.06892 0.117 3.21% FabArray::ParallelCopy_finish() 41 0.04101 0.06013 0.1153 3.16% FabArray::setVal() 143 0.05992 0.06891 0.07166 1.97% Castro::reset_internal_energy(Fab) 1008 0.04466 0.04938 0.05156 1.41% FabArray::ParallelCopy_nowait() 41 0.02854 0.045 0.05126 1.41% StateData::FillBoundary(geom) 41 0.03694 0.04154 0.04575 1.26% Castro::normalize_species() 62 0.03935 0.04101 0.04208 1.15% FillPatchIterator::Initialize 41 0.02452 0.03657 0.04072 1.12% Gravity::interpolate_monopole_grav() 21 0.0256 0.02738 0.02806 0.77% Castro::construct_new_gravity_source() 10 0.01992 0.0229 0.02391 0.66% Castro::expand_state() 10 0.00993 0.01853 0.02208 0.61% Castro::initialize_do_advance() 10 0.0103 0.01759 0.01994 0.55% Castro::computeTemp() 63 0.01736 0.01889 0.01962 0.54% VisMF::Write(FabArray) 2 0.01282 0.01374 0.01659 0.46% MultiFab::Saxpy() 20 0.008715 0.01441 0.01627 0.45% Amr::writePlotFile() 2 0.01077 0.01368 0.01452 0.40% Gravity::get_new_grav_vector() 11 0.007629 0.01146 0.01287 0.35% FabArray::setDomainBndry() 41 0.00496 0.01066 0.01276 0.35% MultiFab::contains_nan() 20 0.009559 0.01134 0.01258 0.35% Castro::construct_old_gravity_source() 10 0.004961 0.01015 0.0118 0.32% Castro::initialize_advance() 10 0.01063 0.01091 0.01165 0.32% Gravity::get_old_grav_vector() 10 0.005549 0.009278 0.01064 0.29% Castro::initMFs() 1 0.006641 0.007684 0.009525 0.26% StateData::define() 4 0.005661 0.006578 0.008302 0.23% Castro::enforce_min_density() 62 0.005932 0.006728 0.007188 0.20% Castro::construct_new_source() 50 0.00481 0.006516 0.007164 0.20% main() 1 0.00434 0.006183 0.006961 0.19% Amr::coarseTimeStep() 10 0.001627 0.002478 0.004684 0.13% Castro::swap_state_time_levels() 10 0.00332 0.004423 0.004682 0.13% Castro::finalize_advance() 10 0.003394 0.003513 0.003592 0.10% Castro::buildMetrics() 1 0.001578 0.001848 0.002364 0.06% Castro::finalize_do_advance() 10 0.0006472 0.001518 0.001896 0.05% Amr::InitAmr() 1 0.0002765 0.0003598 0.0005009 0.01% Amr::timeStep() 10 0.0001731 0.000241 0.0004625 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000285 0.0003013 0.0003175 0.01% DistributionMapping::LeastUsedCPUs() 1 7.496e-06 0.0001828 0.0002807 0.01% Castro::clean_state() 62 0.0001619 0.0001847 0.0002151 0.01% StateDataPhysBCFunct::() 41 0.0001228 0.0001371 0.0001513 0.00% FabArray::ParallelCopy() 41 7.84e-05 8.807e-05 9.593e-05 0.00% Castro::construct_old_source() 50 3.841e-05 7.437e-05 9.252e-05 0.00% Castro::construct_new_gravity() 10 3.378e-05 5.045e-05 9.17e-05 0.00% Castro::enforce_consistent_e() 1 7.929e-05 8.463e-05 9.146e-05 0.00% Castro::do_new_sources() 10 4.544e-05 7.095e-05 8.84e-05 0.00% Castro::do_old_sources() 10 4.274e-05 7.122e-05 8.317e-05 0.00% Amr::FinalizeInit() 1 4.002e-06 1.453e-05 8.305e-05 0.00% Castro::check_for_nan() 20 1.918e-05 3.253e-05 8.179e-05 0.00% FillPatchSingleLevel 41 6.127e-05 6.686e-05 7.782e-05 0.00% Castro::construct_old_gravity() 10 4.004e-05 5.682e-05 7.025e-05 0.00% Amr::writeSmallPlotFile() 1 2.579e-05 6.234e-05 6.971e-05 0.00% Castro::subcycle_advance_ctu() 10 4.873e-05 6.178e-05 6.955e-05 0.00% Castro::Castro() 1 5.278e-05 5.872e-05 6.923e-05 0.00% FabArrayBase::getCPC() 41 4.755e-05 5.453e-05 6.477e-05 0.00% Castro::apply_source_to_state() 20 4.025e-05 5.004e-05 6.066e-05 0.00% Castro::advance() 10 3.352e-05 4.262e-05 4.857e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.316e-05 2.482e-05 4.082e-05 0.00% Amr::defBaseLevel() 1 1.866e-05 2.347e-05 3.511e-05 0.00% FabArrayBase::CPC::define() 2 2.262e-05 2.671e-05 3.286e-05 0.00% Castro::enforce_speed_limit() 62 2.624e-05 2.986e-05 3.202e-05 0.00% Castro::post_timestep() 10 2.658e-05 2.911e-05 3.09e-05 0.00% Castro::create_source_corrector() 10 8.228e-06 1.154e-05 1.637e-05 0.00% Gravity::swapTimeLevels() 10 5.279e-06 1.102e-05 1.512e-05 0.00% Amr::initSubcycle() 1 8.381e-06 1.043e-05 1.46e-05 0.00% Castro::FluxRegCrseInit 10 8.031e-06 9.858e-06 1.244e-05 0.00% Gravity::set_mass_offset() 10 6.333e-06 9.511e-06 1.125e-05 0.00% Castro::computeNewDt() 9 7.329e-06 9.56e-06 1.099e-05 0.00% Castro::retry_advance_ctu() 10 4.587e-06 6.508e-06 7.831e-06 0.00% Amr::InitializeInit() 1 1.958e-06 3.747e-06 6.493e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.529e-06 4.376e-06 5.083e-06 0.00% Castro::post_init() 1 3.037e-06 3.747e-06 4.873e-06 0.00% Castro::computeInitialDt() 2 3.446e-06 4.036e-06 4.429e-06 0.00% Castro::post_regrid() 1 1.859e-06 2.825e-06 4.392e-06 0.00% Amr::init() 1 1.894e-06 2.336e-06 2.864e-06 0.00% Amr::initialInit() 1 1.471e-06 1.748e-06 2.699e-06 0.00% Castro::FluxRegFineAdd() 10 1.949e-06 2.208e-06 2.521e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.163e-06 1.511e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.642 3.643 3.644 100.00% Amr::coarseTimeStep() 10 3.44 3.44 3.44 94.39% Amr::timeStep() 10 3.427 3.429 3.43 94.12% Castro::advance() 10 3.412 3.413 3.413 93.67% Castro::subcycle_advance_ctu() 10 3.336 3.337 3.34 91.65% Castro::do_advance_ctu() 10 3.335 3.337 3.34 91.65% Castro::construct_ctu_hydro_source() 10 2.107 2.4 2.509 68.84% Gravity::make_radial_gravity() 21 0.3346 0.3498 0.3766 10.33% Gravity::get_new_grav_vector() 11 0.2249 0.2291 0.2309 6.34% Castro::construct_old_gravity() 10 0.1966 0.2108 0.2302 6.32% Gravity::get_old_grav_vector() 10 0.1957 0.21 0.2296 6.30% FillPatchIterator::Initialize 41 0.1851 0.1943 0.2117 5.81% Castro::construct_new_gravity() 10 0.2003 0.204 0.2056 5.64% Amr::init() 1 0.1862 0.1864 0.1865 5.12% Castro::initialize_do_advance() 10 0.1614 0.1766 0.1859 5.10% FillPatchSingleLevel 41 0.1324 0.147 0.1822 5.00% Amr::initialInit() 1 0.1694 0.1696 0.1699 4.66% FabArray::ParallelCopy() 41 0.0894 0.1053 0.144 3.95% Amr::InitializeInit() 1 0.06456 0.1014 0.1415 3.88% Amr::defBaseLevel() 1 0.06456 0.1014 0.1415 3.88% Castro::expand_state() 10 0.1226 0.1288 0.1348 3.70% Castro::initData() 1 0.04298 0.08327 0.1234 3.39% Castro::clean_state() 62 0.1069 0.1156 0.1193 3.27% Castro::estTimeStep() 21 0.02623 0.06892 0.117 3.21% FabArray::ParallelCopy_finish() 41 0.04101 0.06013 0.1153 3.16% Amr::FinalizeInit() 1 0.02787 0.06823 0.1049 2.88% Castro::computeInitialDt() 2 0.0017 0.04173 0.07837 2.15% Castro::initialize_advance() 10 0.06886 0.07254 0.07432 2.04% FabArray::setVal() 143 0.05992 0.06891 0.07166 1.97% Castro::computeTemp() 63 0.06234 0.06857 0.07135 1.96% Castro::do_new_sources() 10 0.05329 0.06304 0.0651 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04497 0.04968 0.05187 1.42% Castro::reset_internal_energy(Fab) 1008 0.04466 0.04938 0.05156 1.41% FabArray::ParallelCopy_nowait() 41 0.02863 0.04508 0.05133 1.41% Castro::do_old_sources() 10 0.0327 0.04522 0.04899 1.34% StateDataPhysBCFunct::() 41 0.03707 0.04168 0.0459 1.26% StateData::FillBoundary(geom) 41 0.03694 0.04154 0.04575 1.26% Castro::normalize_species() 62 0.03935 0.04101 0.04208 1.15% Castro::construct_new_source() 50 0.02473 0.02941 0.03093 0.85% Gravity::interpolate_monopole_grav() 21 0.0256 0.02738 0.02806 0.77% Amr::writePlotFile() 2 0.02726 0.02742 0.02775 0.76% Castro::post_init() 1 0.02568 0.02596 0.02612 0.72% Castro::construct_new_gravity_source() 10 0.01992 0.0229 0.02391 0.66% VisMF::Write(FabArray) 2 0.01282 0.01374 0.01659 0.46% Castro::post_timestep() 10 0.0144 0.0158 0.01638 0.45% Castro::apply_source_to_state() 20 0.008755 0.01446 0.01633 0.45% MultiFab::Saxpy() 20 0.008715 0.01441 0.01627 0.45% Castro::Castro() 1 0.01011 0.01129 0.01329 0.36% FabArray::setDomainBndry() 41 0.00496 0.01066 0.01276 0.35% Castro::check_for_nan() 20 0.009584 0.01137 0.01261 0.35% MultiFab::contains_nan() 20 0.009559 0.01134 0.01258 0.35% Castro::construct_old_source() 50 0.004999 0.01023 0.01189 0.33% Castro::construct_old_gravity_source() 10 0.004961 0.01015 0.0118 0.32% Castro::initMFs() 1 0.006641 0.007684 0.009525 0.26% AmrLevel::AmrLevel(dm) 1 0.005688 0.006603 0.008342 0.23% StateData::define() 4 0.005661 0.006578 0.008302 0.23% Castro::enforce_min_density() 62 0.005932 0.006728 0.007188 0.20% Castro::computeNewDt() 9 0.007114 0.007123 0.00713 0.20% Castro::swap_state_time_levels() 10 0.00332 0.004423 0.004682 0.13% Castro::finalize_advance() 10 0.003409 0.003525 0.003602 0.10% Castro::buildMetrics() 1 0.001691 0.001994 0.00258 0.07% Castro::finalize_do_advance() 10 0.0006472 0.001518 0.001896 0.05% Castro::post_regrid() 1 0.001508 0.001566 0.001644 0.05% Amr::InitAmr() 1 0.0002849 0.0003702 0.0005155 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.304e-05 0.0001883 0.000287 0.01% DistributionMapping::LeastUsedCPUs() 1 7.496e-06 0.0001828 0.0002807 0.01% FabArrayBase::getCPC() 41 7.04e-05 8.124e-05 9.264e-05 0.00% Castro::enforce_consistent_e() 1 7.929e-05 8.463e-05 9.146e-05 0.00% Amr::writeSmallPlotFile() 1 2.579e-05 6.234e-05 6.971e-05 0.00% FabArrayBase::CPC::define() 2 2.262e-05 2.671e-05 3.286e-05 0.00% Castro::enforce_speed_limit() 62 2.624e-05 2.986e-05 3.202e-05 0.00% Castro::create_source_corrector() 10 8.228e-06 1.154e-05 1.637e-05 0.00% Gravity::swapTimeLevels() 10 5.279e-06 1.102e-05 1.512e-05 0.00% Amr::initSubcycle() 1 8.381e-06 1.043e-05 1.46e-05 0.00% Castro::FluxRegCrseInit 10 8.031e-06 9.858e-06 1.244e-05 0.00% Gravity::set_mass_offset() 10 6.333e-06 9.511e-06 1.125e-05 0.00% Castro::retry_advance_ctu() 10 4.587e-06 6.508e-06 7.831e-06 0.00% Castro::FluxRegFineAdd() 10 1.949e-06 2.208e-06 2.521e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.163e-06 1.511e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-24-g3ec07681574a) finalized