MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-24-g3ec07681574a) initialized Starting run at 05:40:15 UTC on 2022-10-27. Successfully read inputs file ... Castro git describe: 22.09-3-g41697201c AMReX git describe: 22.10-24-g3ec076815 Microphysics git describe: 22.10-5-g820f45d5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015391099 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.37600216 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342576947 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341330604 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341888288 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35074318 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.349538794 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.345624436 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.33782626 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.337614012 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337261585 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.046346386 seconds Ending run at 05:40:18 UTC on 2022-10-27. Run time = 3.697073068 Run time without initialization = 3.514390308 Average number of zones advanced per microsecond: 0.746 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.695 ... 3.696 ... 3.697 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1041 2.3933 2.5102 67.90% Castro::do_advance_ctu() 10 0.03856 0.1586 0.4515 12.21% Gravity::make_radial_gravity() 21 0.3487 0.364 0.3785 10.24% Castro::initData() 1 0.03905 0.08071 0.1156 3.13% FabArray::ParallelCopy_finish() 41 0.04405 0.06442 0.1149 3.11% Castro::estTimeStep() 21 0.0255 0.06343 0.1047 2.83% FabArray::setVal() 143 0.06301 0.06958 0.07209 1.95% Castro::reset_internal_energy(Fab) 1008 0.0462 0.04932 0.05213 1.41% Amr::writePlotFile() 2 0.04623 0.04904 0.04962 1.34% FabArray::ParallelCopy_nowait() 41 0.02931 0.04423 0.04938 1.34% StateData::FillBoundary(geom) 41 0.03624 0.04188 0.04722 1.28% Castro::normalize_species() 62 0.03973 0.04116 0.04194 1.13% FillPatchIterator::Initialize 41 0.02417 0.03587 0.04013 1.09% Gravity::interpolate_monopole_grav() 21 0.02611 0.02754 0.02815 0.76% Castro::construct_new_gravity_source() 10 0.02061 0.0231 0.02404 0.65% Castro::expand_state() 10 0.009791 0.018 0.02144 0.58% Castro::computeTemp() 63 0.01624 0.01851 0.0202 0.55% Castro::initialize_do_advance() 10 0.01021 0.01751 0.01976 0.53% MultiFab::Saxpy() 20 0.01057 0.01445 0.01622 0.44% VisMF::Write(FabArray) 2 0.01235 0.01305 0.01574 0.43% Gravity::get_new_grav_vector() 11 0.008326 0.0115 0.0132 0.36% MultiFab::contains_nan() 20 0.01067 0.01157 0.01305 0.35% FabArray::setDomainBndry() 41 0.004876 0.01013 0.01213 0.33% Castro::construct_old_gravity_source() 10 0.004895 0.01016 0.01191 0.32% Castro::initialize_advance() 10 0.01053 0.0108 0.01142 0.31% Gravity::get_old_grav_vector() 10 0.00559 0.00927 0.01057 0.29% Castro::initMFs() 1 0.006681 0.00726 0.007818 0.21% Castro::enforce_min_density() 62 0.006411 0.006703 0.007084 0.19% Castro::construct_new_source() 50 0.004956 0.006471 0.007057 0.19% main() 1 0.0047 0.006307 0.00705 0.19% Castro::swap_state_time_levels() 10 0.003447 0.004844 0.006669 0.18% StateData::define() 4 0.005522 0.005909 0.0063 0.17% Amr::coarseTimeStep() 10 0.001043 0.002116 0.003828 0.10% Castro::finalize_do_advance() 10 0.0006372 0.001574 0.001881 0.05% Castro::buildMetrics() 1 0.001574 0.001709 0.001873 0.05% Amr::InitAmr() 1 0.0002896 0.0003254 0.0004716 0.01% Amr::timeStep() 10 0.000178 0.0002213 0.0003762 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002691 0.000291 0.0003076 0.01% DistributionMapping::LeastUsedCPUs() 1 7.722e-06 0.0001624 0.0002002 0.01% Castro::clean_state() 62 0.0001429 0.0001643 0.000176 0.00% StateDataPhysBCFunct::() 41 9.297e-05 0.0001179 0.000135 0.00% Castro::enforce_consistent_e() 1 7.373e-05 8.548e-05 9.553e-05 0.00% Castro::construct_old_source() 50 2.871e-05 7.135e-05 9.224e-05 0.00% Amr::FinalizeInit() 1 3.626e-06 1.506e-05 8.863e-05 0.00% FabArray::ParallelCopy() 41 6.623e-05 7.89e-05 8.424e-05 0.00% Castro::do_old_sources() 10 3.332e-05 6.381e-05 8.321e-05 0.00% Castro::do_new_sources() 10 4.415e-05 7.037e-05 8.083e-05 0.00% FillPatchSingleLevel 41 5.574e-05 6.759e-05 8.077e-05 0.00% Castro::Castro() 1 5.678e-05 6.22e-05 7.963e-05 0.00% Castro::apply_source_to_state() 20 3.376e-05 5.078e-05 7.275e-05 0.00% Castro::subcycle_advance_ctu() 10 4.32e-05 5.81e-05 7.229e-05 0.00% Amr::writeSmallPlotFile() 1 2.658e-05 5.202e-05 6.723e-05 0.00% Castro::construct_old_gravity() 10 3.16e-05 5.063e-05 6.356e-05 0.00% FabArrayBase::getCPC() 41 4.535e-05 5.256e-05 6.159e-05 0.00% Castro::construct_new_gravity() 10 3.833e-05 4.836e-05 5.526e-05 0.00% Castro::finalize_advance() 10 4.611e-05 4.969e-05 5.418e-05 0.00% Castro::advance() 10 2.801e-05 4.069e-05 4.85e-05 0.00% Castro::check_for_nan() 20 2.277e-05 2.616e-05 3.302e-05 0.00% Castro::enforce_speed_limit() 62 2.102e-05 2.673e-05 3.266e-05 0.00% FabArrayBase::CPC::define() 2 2.074e-05 2.551e-05 3.265e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.734e-05 2.286e-05 3.075e-05 0.00% Amr::defBaseLevel() 1 1.734e-05 2.412e-05 3.066e-05 0.00% Castro::post_timestep() 10 1.334e-05 1.845e-05 2.848e-05 0.00% Amr::init() 1 1.662e-06 4.133e-06 1.884e-05 0.00% Castro::create_source_corrector() 10 6.867e-06 1.143e-05 1.713e-05 0.00% Gravity::swapTimeLevels() 10 7.975e-06 1.176e-05 1.504e-05 0.00% Castro::FluxRegCrseInit 10 6.722e-06 8.138e-06 1.141e-05 0.00% Castro::post_init() 1 3.301e-06 4.896e-06 1.108e-05 0.00% Gravity::set_mass_offset() 10 6.898e-06 9.872e-06 1.102e-05 0.00% Castro::computeNewDt() 9 7.124e-06 9.29e-06 1.062e-05 0.00% Amr::initSubcycle() 1 8.329e-06 9.122e-06 9.817e-06 0.00% Castro::retry_advance_ctu() 10 3.861e-06 5.809e-06 7.235e-06 0.00% Amr::InitializeInit() 1 2.092e-06 3.213e-06 7.198e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.247e-06 5.048e-06 6.252e-06 0.00% Castro::computeInitialDt() 2 3.067e-06 3.947e-06 4.602e-06 0.00% Castro::FluxRegFineAdd() 10 1.778e-06 2.431e-06 3.327e-06 0.00% Castro::post_regrid() 1 1.672e-06 2.422e-06 3.243e-06 0.00% Amr::initialInit() 1 1.22e-06 1.463e-06 1.719e-06 0.00% DistributionMapping::Distribute() 1 1.092e-06 1.232e-06 1.453e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.695 3.696 3.697 100.00% Amr::coarseTimeStep() 10 3.461 3.461 3.461 93.62% Amr::timeStep() 10 3.449 3.451 3.452 93.37% Castro::advance() 10 3.434 3.435 3.435 92.92% Castro::subcycle_advance_ctu() 10 3.36 3.362 3.365 91.02% Castro::do_advance_ctu() 10 3.36 3.362 3.365 91.02% Castro::construct_ctu_hydro_source() 10 2.104 2.393 2.51 67.90% Gravity::make_radial_gravity() 21 0.3487 0.364 0.3785 10.24% Gravity::get_new_grav_vector() 11 0.236 0.2413 0.2449 6.62% Castro::construct_old_gravity() 10 0.1992 0.2136 0.2267 6.13% Gravity::get_old_grav_vector() 10 0.1983 0.2128 0.226 6.11% Castro::construct_new_gravity() 10 0.2092 0.214 0.2172 5.87% FillPatchIterator::Initialize 41 0.1874 0.1969 0.211 5.71% Castro::initialize_do_advance() 10 0.1626 0.1775 0.1871 5.06% Amr::init() 1 0.1821 0.1822 0.1823 4.93% FillPatchSingleLevel 41 0.1355 0.1509 0.182 4.92% Amr::initialInit() 1 0.1662 0.1666 0.1667 4.51% FabArray::ParallelCopy() 41 0.09283 0.1088 0.1444 3.90% Castro::expand_state() 10 0.1235 0.1301 0.1366 3.70% Amr::InitializeInit() 1 0.05905 0.1019 0.136 3.68% Amr::defBaseLevel() 1 0.05905 0.1019 0.136 3.68% Castro::clean_state() 62 0.1081 0.1152 0.1205 3.26% Castro::initData() 1 0.04296 0.08463 0.1198 3.24% FabArray::ParallelCopy_finish() 41 0.04405 0.06442 0.1149 3.11% Amr::FinalizeInit() 1 0.03045 0.06466 0.1075 2.91% Castro::estTimeStep() 21 0.0255 0.06343 0.1047 2.83% Castro::computeInitialDt() 2 0.001733 0.03586 0.07872 2.13% Castro::initialize_advance() 10 0.07008 0.07298 0.07524 2.03% Castro::computeTemp() 63 0.06271 0.06811 0.07262 1.96% FabArray::setVal() 143 0.06301 0.06958 0.07209 1.95% Castro::do_new_sources() 10 0.05495 0.06263 0.06446 1.74% Amr::writePlotFile() 2 0.06196 0.0621 0.0624 1.69% Castro::reset_internal_energy(MultiFab) 63 0.04647 0.04961 0.05244 1.42% Castro::reset_internal_energy(Fab) 1008 0.0462 0.04932 0.05213 1.41% Castro::do_old_sources() 10 0.03452 0.04531 0.05 1.35% FabArray::ParallelCopy_nowait() 41 0.0294 0.04431 0.04945 1.34% StateDataPhysBCFunct::() 41 0.03634 0.042 0.04736 1.28% StateData::FillBoundary(geom) 41 0.03624 0.04188 0.04722 1.28% Castro::normalize_species() 62 0.03973 0.04116 0.04194 1.13% Castro::construct_new_source() 50 0.02557 0.02957 0.03084 0.83% Castro::post_init() 1 0.0279 0.02814 0.02831 0.77% Gravity::interpolate_monopole_grav() 21 0.02611 0.02754 0.02815 0.76% Castro::construct_new_gravity_source() 10 0.02061 0.0231 0.02404 0.65% Castro::post_timestep() 10 0.01388 0.01542 0.01661 0.45% Castro::apply_source_to_state() 20 0.01061 0.0145 0.01629 0.44% MultiFab::Saxpy() 20 0.01057 0.01445 0.01622 0.44% VisMF::Write(FabArray) 2 0.01235 0.01305 0.01574 0.43% Castro::check_for_nan() 20 0.01069 0.0116 0.01308 0.35% MultiFab::contains_nan() 20 0.01067 0.01157 0.01305 0.35% FabArray::setDomainBndry() 41 0.004876 0.01013 0.01213 0.33% Castro::construct_old_source() 50 0.004924 0.01023 0.01199 0.32% Castro::Castro() 1 0.01032 0.01113 0.01191 0.32% Castro::construct_old_gravity_source() 10 0.004895 0.01016 0.01191 0.32% Castro::initMFs() 1 0.006681 0.00726 0.007818 0.21% Castro::computeNewDt() 9 0.00712 0.007134 0.007161 0.19% Castro::enforce_min_density() 62 0.006411 0.006703 0.007084 0.19% Castro::swap_state_time_levels() 10 0.003447 0.004844 0.006669 0.18% AmrLevel::AmrLevel(dm) 1 0.005541 0.005932 0.006318 0.17% StateData::define() 4 0.005522 0.005909 0.0063 0.17% Castro::buildMetrics() 1 0.001688 0.001836 0.002014 0.05% Castro::finalize_do_advance() 10 0.0006372 0.001574 0.001881 0.05% Castro::post_regrid() 1 0.001532 0.001601 0.001851 0.05% Amr::InitAmr() 1 0.0002985 0.0003346 0.0004811 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.308e-05 0.0001687 0.0002077 0.01% DistributionMapping::LeastUsedCPUs() 1 7.722e-06 0.0001624 0.0002002 0.01% Castro::enforce_consistent_e() 1 7.373e-05 8.548e-05 9.553e-05 0.00% FabArrayBase::getCPC() 41 6.918e-05 7.807e-05 8.898e-05 0.00% Castro::finalize_advance() 10 5.58e-05 6.026e-05 6.792e-05 0.00% Amr::writeSmallPlotFile() 1 2.658e-05 5.202e-05 6.723e-05 0.00% Castro::enforce_speed_limit() 62 2.102e-05 2.673e-05 3.266e-05 0.00% FabArrayBase::CPC::define() 2 2.074e-05 2.551e-05 3.265e-05 0.00% Castro::create_source_corrector() 10 6.867e-06 1.143e-05 1.713e-05 0.00% Gravity::swapTimeLevels() 10 7.975e-06 1.176e-05 1.504e-05 0.00% Castro::FluxRegCrseInit 10 6.722e-06 8.138e-06 1.141e-05 0.00% Gravity::set_mass_offset() 10 6.898e-06 9.872e-06 1.102e-05 0.00% Amr::initSubcycle() 1 8.329e-06 9.122e-06 9.817e-06 0.00% Castro::retry_advance_ctu() 10 3.861e-06 5.809e-06 7.235e-06 0.00% Castro::FluxRegFineAdd() 10 1.778e-06 2.431e-06 3.327e-06 0.00% DistributionMapping::Distribute() 1 1.092e-06 1.232e-06 1.453e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-24-g3ec07681574a) finalized