MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-25-g735c3513153f) initialized Starting run at 16:27:58 UTC on 2022-10-30. Successfully read inputs file ... Castro git describe: 22.09-8-g7bf2046e7 AMReX git describe: 22.10-25-g735c35131 Microphysics git describe: 22.10-6-gba400003 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015184654 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35903352 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.355167836 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.346762525 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.346043095 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35817861 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.34824183 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.340285646 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340183831 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.341270875 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.341292283 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010522081 seconds Ending run at 16:28:02 UTC on 2022-10-30. Run time = 3.716675965 Run time without initialization = 3.495008171 Average number of zones advanced per microsecond: 0.750 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.716 ... 3.716 ... 3.717 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0709 2.4314 2.5428 68.41% Castro::do_advance_ctu() 10 0.03159 0.1438 0.5082 13.67% Gravity::make_radial_gravity() 21 0.3403 0.3529 0.3855 10.37% Castro::initData() 1 0.03961 0.08932 0.1505 4.05% Castro::estTimeStep() 21 0.0288 0.09644 0.1468 3.95% FabArray::ParallelCopy_finish() 41 0.03788 0.05867 0.1353 3.64% FabArray::setVal() 143 0.04933 0.06558 0.06999 1.88% Castro::reset_internal_energy(Fab) 1008 0.04632 0.05011 0.05252 1.41% FabArray::ParallelCopy_nowait() 41 0.02675 0.04556 0.05112 1.38% StateData::FillBoundary(geom) 41 0.03343 0.04234 0.04704 1.27% Castro::normalize_species() 62 0.03937 0.0412 0.04265 1.15% FillPatchIterator::Initialize 41 0.0231 0.0368 0.04064 1.09% Gravity::interpolate_monopole_grav() 21 0.02558 0.02722 0.02783 0.75% Castro::construct_new_gravity_source() 10 0.01936 0.02254 0.02333 0.63% Castro::expand_state() 10 0.009462 0.01964 0.02306 0.62% Castro::computeTemp() 63 0.01751 0.01913 0.02021 0.54% Castro::initialize_do_advance() 10 0.009301 0.0182 0.01995 0.54% VisMF::Write(FabArray) 2 0.01255 0.01343 0.01737 0.47% MultiFab::Saxpy() 20 0.008364 0.01433 0.01658 0.45% Amr::writePlotFile() 2 0.008554 0.01271 0.01389 0.37% Gravity::get_new_grav_vector() 11 0.007133 0.01201 0.01334 0.36% FabArray::setDomainBndry() 41 0.004671 0.0111 0.01293 0.35% MultiFab::contains_nan() 20 0.01006 0.01141 0.01225 0.33% Castro::construct_old_gravity_source() 10 0.004885 0.01008 0.01178 0.32% Gravity::get_old_grav_vector() 10 0.005361 0.009809 0.01147 0.31% Castro::initialize_advance() 10 0.003269 0.008656 0.01064 0.29% Castro::initMFs() 1 0.006718 0.008345 0.009883 0.27% StateData::define() 4 0.005548 0.007139 0.008645 0.23% Castro::enforce_min_density() 62 0.005856 0.006707 0.007375 0.20% main() 1 0.006636 0.006949 0.00725 0.20% Castro::construct_new_source() 50 0.004685 0.006555 0.007199 0.19% Castro::swap_state_time_levels() 10 0.003256 0.004273 0.004631 0.12% Castro::finalize_advance() 10 0.002979 0.003349 0.003511 0.09% Amr::coarseTimeStep() 10 0.001696 0.002185 0.003491 0.09% Castro::buildMetrics() 1 0.001586 0.001988 0.00234 0.06% Castro::finalize_do_advance() 10 0.0005618 0.001624 0.002069 0.06% Amr::InitAmr() 1 0.0002825 0.000439 0.0007463 0.02% DistributionMapping::LeastUsedCPUs() 1 8.453e-06 0.0003973 0.0005868 0.02% Amr::timeStep() 10 0.0001852 0.0002807 0.0005817 0.02% Castro::reset_internal_energy(MultiFab) 63 0.0002971 0.0003116 0.0003264 0.01% Castro::clean_state() 62 0.000157 0.0001755 0.0001964 0.01% StateDataPhysBCFunct::() 41 0.0001 0.0001211 0.0001341 0.00% FabArray::ParallelCopy() 41 8.618e-05 9.447e-05 0.0001114 0.00% Castro::construct_old_source() 50 3.738e-05 7.509e-05 9.492e-05 0.00% Castro::enforce_consistent_e() 1 8.502e-05 8.847e-05 9.48e-05 0.00% Castro::do_new_sources() 10 4.881e-05 7.387e-05 9.2e-05 0.00% Castro::do_old_sources() 10 4.771e-05 7.456e-05 8.54e-05 0.00% Castro::subcycle_advance_ctu() 10 4.647e-05 5.407e-05 8.276e-05 0.00% Castro::Castro() 1 5.472e-05 6.815e-05 7.908e-05 0.00% FillPatchSingleLevel 41 6.418e-05 7.269e-05 7.712e-05 0.00% FabArrayBase::getCPC() 41 5.541e-05 6.157e-05 7.214e-05 0.00% Amr::FinalizeInit() 1 4.093e-06 1.291e-05 7.013e-05 0.00% Castro::construct_old_gravity() 10 4.291e-05 5.727e-05 6.941e-05 0.00% Amr::writeSmallPlotFile() 1 3.188e-05 6.013e-05 6.682e-05 0.00% Castro::apply_source_to_state() 20 3.503e-05 5.252e-05 6.616e-05 0.00% Castro::advance() 10 3.56e-05 4.64e-05 5.899e-05 0.00% Castro::construct_new_gravity() 10 4.266e-05 4.64e-05 5.222e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.496e-05 2.857e-05 4.28e-05 0.00% FabArrayBase::CPC::define() 2 2.327e-05 2.732e-05 3.876e-05 0.00% Castro::enforce_speed_limit() 62 2.635e-05 2.944e-05 3.46e-05 0.00% Castro::post_timestep() 10 1.755e-05 2.268e-05 3.17e-05 0.00% Castro::check_for_nan() 20 2.339e-05 2.533e-05 2.752e-05 0.00% Amr::defBaseLevel() 1 1.887e-05 2.237e-05 2.591e-05 0.00% Gravity::swapTimeLevels() 10 7.525e-06 1.338e-05 1.918e-05 0.00% Amr::initSubcycle() 1 8.842e-06 1.246e-05 1.773e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.958e-06 6.239e-06 1.708e-05 0.00% Castro::create_source_corrector() 10 6.091e-06 1.08e-05 1.39e-05 0.00% Gravity::set_mass_offset() 10 8.586e-06 1.023e-05 1.186e-05 0.00% Castro::FluxRegCrseInit 10 6.02e-06 8.183e-06 1.122e-05 0.00% Castro::computeNewDt() 9 8.257e-06 9.561e-06 1.12e-05 0.00% Amr::initialInit() 1 1.266e-06 2.655e-06 9.328e-06 0.00% Amr::InitializeInit() 1 2.21e-06 3.955e-06 8.268e-06 0.00% Castro::retry_advance_ctu() 10 3.724e-06 5.855e-06 7.372e-06 0.00% Castro::post_regrid() 1 1.938e-06 3.345e-06 5.653e-06 0.00% Castro::post_init() 1 3.17e-06 4.009e-06 5.471e-06 0.00% Castro::computeInitialDt() 2 2.762e-06 3.45e-06 4.271e-06 0.00% Castro::FluxRegFineAdd() 10 1.643e-06 2.368e-06 3.074e-06 0.00% Amr::init() 1 1.871e-06 2.34e-06 2.877e-06 0.00% DistributionMapping::Distribute() 1 1.06e-06 1.378e-06 1.877e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.716 3.716 3.717 100.00% Amr::coarseTimeStep() 10 3.477 3.477 3.477 93.56% Amr::timeStep() 10 3.464 3.465 3.466 93.25% Castro::advance() 10 3.447 3.449 3.449 92.80% Castro::subcycle_advance_ctu() 10 3.374 3.378 3.395 91.34% Castro::do_advance_ctu() 10 3.374 3.378 3.395 91.34% Castro::construct_ctu_hydro_source() 10 2.071 2.431 2.543 68.41% Gravity::make_radial_gravity() 21 0.3403 0.3529 0.3855 10.37% Castro::construct_old_gravity() 10 0.2021 0.2121 0.2369 6.37% Gravity::get_old_grav_vector() 10 0.2011 0.2113 0.2363 6.36% Gravity::get_new_grav_vector() 11 0.23 0.2319 0.2331 6.27% FillPatchIterator::Initialize 41 0.1829 0.1948 0.2236 6.02% Amr::init() 1 0.2207 0.2211 0.2212 5.95% Castro::construct_new_gravity() 10 0.2056 0.2071 0.2081 5.60% Amr::initialInit() 1 0.2052 0.2055 0.2059 5.54% FillPatchSingleLevel 41 0.1303 0.1469 0.1959 5.27% Castro::initialize_do_advance() 10 0.1696 0.1779 0.1828 4.92% Amr::InitializeInit() 1 0.06041 0.113 0.1773 4.77% Amr::defBaseLevel() 1 0.06041 0.113 0.1773 4.77% FabArray::ParallelCopy() 41 0.08698 0.1044 0.1622 4.37% Castro::initData() 1 0.04341 0.09309 0.1546 4.16% Castro::estTimeStep() 21 0.0288 0.09644 0.1468 3.95% Amr::FinalizeInit() 1 0.02816 0.09251 0.1454 3.91% FabArray::ParallelCopy_finish() 41 0.03788 0.05867 0.1353 3.64% Castro::expand_state() 10 0.1229 0.1295 0.1344 3.61% Castro::clean_state() 62 0.1087 0.1167 0.1201 3.23% Castro::computeInitialDt() 2 0.002078 0.06639 0.1192 3.21% Castro::computeTemp() 63 0.06414 0.06956 0.07305 1.97% Castro::initialize_advance() 10 0.04942 0.06683 0.07131 1.92% FabArray::setVal() 143 0.04933 0.06558 0.06999 1.88% Castro::do_new_sources() 10 0.0527 0.06294 0.06483 1.74% Castro::reset_internal_energy(MultiFab) 63 0.04664 0.05043 0.05284 1.42% Castro::reset_internal_energy(Fab) 1008 0.04632 0.05011 0.05252 1.41% FabArray::ParallelCopy_nowait() 41 0.02686 0.04565 0.0512 1.38% Castro::do_old_sources() 10 0.03201 0.04533 0.04919 1.32% StateDataPhysBCFunct::() 41 0.03355 0.04246 0.04717 1.27% StateData::FillBoundary(geom) 41 0.03343 0.04234 0.04704 1.27% Castro::normalize_species() 62 0.03937 0.0412 0.04265 1.15% Castro::construct_new_source() 50 0.02404 0.02909 0.03039 0.82% Gravity::interpolate_monopole_grav() 21 0.02558 0.02722 0.02783 0.75% Amr::writePlotFile() 2 0.02592 0.02614 0.02645 0.71% Castro::post_init() 1 0.02532 0.0256 0.02578 0.69% Castro::construct_new_gravity_source() 10 0.01936 0.02254 0.02333 0.63% VisMF::Write(FabArray) 2 0.01255 0.01343 0.01737 0.47% Castro::apply_source_to_state() 20 0.008419 0.01439 0.01664 0.45% MultiFab::Saxpy() 20 0.008364 0.01433 0.01658 0.45% Castro::post_timestep() 10 0.01595 0.0162 0.01644 0.44% Castro::Castro() 1 0.009844 0.01232 0.01445 0.39% FabArray::setDomainBndry() 41 0.004671 0.0111 0.01293 0.35% Castro::check_for_nan() 20 0.01008 0.01144 0.01228 0.33% MultiFab::contains_nan() 20 0.01006 0.01141 0.01225 0.33% Castro::construct_old_source() 50 0.004922 0.01015 0.01186 0.32% Castro::construct_old_gravity_source() 10 0.004885 0.01008 0.01178 0.32% Castro::initMFs() 1 0.006718 0.008345 0.009883 0.27% Castro::computeNewDt() 9 0.008867 0.008876 0.008881 0.24% AmrLevel::AmrLevel(dm) 1 0.005563 0.007168 0.008677 0.23% StateData::define() 4 0.005548 0.007139 0.008645 0.23% Castro::enforce_min_density() 62 0.005856 0.006707 0.007375 0.20% Castro::swap_state_time_levels() 10 0.003256 0.004273 0.004631 0.12% Castro::finalize_advance() 10 0.002988 0.00336 0.003522 0.09% Castro::buildMetrics() 1 0.001701 0.002159 0.002557 0.07% Castro::finalize_do_advance() 10 0.0005618 0.001624 0.002069 0.06% Castro::post_regrid() 1 0.001578 0.001613 0.001647 0.04% Amr::InitAmr() 1 0.0002914 0.0004515 0.0007622 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.414e-05 0.0004049 0.0005935 0.02% DistributionMapping::LeastUsedCPUs() 1 8.453e-06 0.0003973 0.0005868 0.02% FabArrayBase::getCPC() 41 8.191e-05 8.889e-05 0.0001057 0.00% Castro::enforce_consistent_e() 1 8.502e-05 8.847e-05 9.48e-05 0.00% Amr::writeSmallPlotFile() 1 3.188e-05 6.013e-05 6.682e-05 0.00% FabArrayBase::CPC::define() 2 2.327e-05 2.732e-05 3.876e-05 0.00% Castro::enforce_speed_limit() 62 2.635e-05 2.944e-05 3.46e-05 0.00% Gravity::swapTimeLevels() 10 7.525e-06 1.338e-05 1.918e-05 0.00% Amr::initSubcycle() 1 8.842e-06 1.246e-05 1.773e-05 0.00% Castro::create_source_corrector() 10 6.091e-06 1.08e-05 1.39e-05 0.00% Gravity::set_mass_offset() 10 8.586e-06 1.023e-05 1.186e-05 0.00% Castro::FluxRegCrseInit 10 6.02e-06 8.183e-06 1.122e-05 0.00% Castro::retry_advance_ctu() 10 3.724e-06 5.855e-06 7.372e-06 0.00% Castro::FluxRegFineAdd() 10 1.643e-06 2.368e-06 3.074e-06 0.00% DistributionMapping::Distribute() 1 1.06e-06 1.378e-06 1.877e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-25-g735c3513153f) finalized