MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-25-g735c3513153f) initialized Starting run at 05:39:27 UTC on 2022-10-31. Successfully read inputs file ... Castro git describe: 22.09-8-g4d18c91ff AMReX git describe: 22.10-25-g735c35131 Microphysics git describe: 22.10-6-gba400003 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01616936 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.352685925 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342709988 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342772832 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343634889 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.353574262 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.352709312 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.341172104 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339977886 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.341047393 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.341572851 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010195639 seconds Ending run at 05:39:30 UTC on 2022-10-31. Run time = 3.686169551 Run time without initialization = 3.470094017 Average number of zones advanced per microsecond: 0.755 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.685 ... 3.686 ... 3.686 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1228 2.4149 2.5193 68.34% Castro::do_advance_ctu() 10 0.03126 0.1347 0.431 11.69% Gravity::make_radial_gravity() 21 0.3389 0.3526 0.3798 10.30% Castro::estTimeStep() 21 0.0311 0.0911 0.1419 3.85% Castro::initData() 1 0.03928 0.08839 0.1418 3.85% FabArray::ParallelCopy_finish() 41 0.04426 0.06295 0.1227 3.33% FabArray::setVal() 143 0.05632 0.06721 0.06985 1.89% Castro::reset_internal_energy(Fab) 1008 0.04783 0.05014 0.05196 1.41% FabArray::ParallelCopy_nowait() 41 0.02776 0.04489 0.05081 1.38% StateData::FillBoundary(geom) 41 0.03541 0.04225 0.04685 1.27% Castro::normalize_species() 62 0.04099 0.04145 0.04216 1.14% FillPatchIterator::Initialize 41 0.02428 0.03583 0.04008 1.09% Gravity::interpolate_monopole_grav() 21 0.02639 0.02748 0.02786 0.76% Castro::construct_new_gravity_source() 10 0.01976 0.02285 0.02412 0.65% Castro::expand_state() 10 0.009957 0.01926 0.02334 0.63% Castro::computeTemp() 63 0.01831 0.01907 0.01989 0.54% Castro::initialize_do_advance() 10 0.01017 0.0173 0.01883 0.51% VisMF::Write(FabArray) 2 0.01287 0.01372 0.01799 0.49% MultiFab::Saxpy() 20 0.008764 0.01442 0.01676 0.45% Amr::writePlotFile() 2 0.008588 0.01293 0.01392 0.38% Gravity::get_new_grav_vector() 11 0.007742 0.01139 0.01256 0.34% MultiFab::contains_nan() 20 0.009675 0.01131 0.01242 0.34% FabArray::setDomainBndry() 41 0.004725 0.01037 0.01238 0.34% Castro::construct_old_gravity_source() 10 0.004969 0.01013 0.01212 0.33% Gravity::get_old_grav_vector() 10 0.005761 0.009409 0.01115 0.30% Castro::initialize_advance() 10 0.003234 0.008778 0.0107 0.29% Castro::initMFs() 1 0.006792 0.007927 0.01009 0.27% StateData::define() 4 0.005556 0.006565 0.008263 0.22% Castro::enforce_min_density() 62 0.006013 0.006761 0.007208 0.20% main() 1 0.006304 0.006911 0.007194 0.20% Castro::construct_new_source() 50 0.004874 0.006527 0.007131 0.19% Castro::swap_state_time_levels() 10 0.00328 0.004375 0.00462 0.13% Castro::finalize_advance() 10 0.00346 0.003553 0.003699 0.10% Amr::coarseTimeStep() 10 0.00196 0.002563 0.003598 0.10% Castro::buildMetrics() 1 0.001591 0.001874 0.002362 0.06% Castro::finalize_do_advance() 10 0.0007594 0.001485 0.001806 0.05% Amr::InitAmr() 1 0.0002947 0.0003761 0.0005174 0.01% Amr::timeStep() 10 0.0001786 0.0002534 0.0004619 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000282 0.0003007 0.0003187 0.01% DistributionMapping::LeastUsedCPUs() 1 5.989e-06 0.0001711 0.0002614 0.01% Castro::clean_state() 62 0.0001397 0.0001709 0.0001872 0.01% StateDataPhysBCFunct::() 41 8.362e-05 0.0001184 0.0001362 0.00% Castro::enforce_consistent_e() 1 7.699e-05 8.912e-05 0.0001061 0.00% FabArray::ParallelCopy() 41 5.93e-05 8.647e-05 0.0001008 0.00% Castro::construct_old_source() 50 3.543e-05 7.528e-05 9.79e-05 0.00% Castro::do_new_sources() 10 3.779e-05 7.018e-05 9.05e-05 0.00% Amr::writeSmallPlotFile() 1 3.175e-05 6.945e-05 8.849e-05 0.00% Castro::do_old_sources() 10 4.239e-05 6.904e-05 8.338e-05 0.00% Castro::subcycle_advance_ctu() 10 3.896e-05 5.941e-05 8.112e-05 0.00% FillPatchSingleLevel 41 5.786e-05 6.778e-05 7.624e-05 0.00% Castro::Castro() 1 5.459e-05 6.313e-05 7.502e-05 0.00% Amr::FinalizeInit() 1 4.706e-06 1.408e-05 7.496e-05 0.00% Castro::construct_old_gravity() 10 3.258e-05 5.78e-05 7.063e-05 0.00% FabArrayBase::getCPC() 41 3.896e-05 5.556e-05 6.597e-05 0.00% Castro::apply_source_to_state() 20 2.842e-05 4.976e-05 6.584e-05 0.00% Castro::construct_new_gravity() 10 3.573e-05 4.722e-05 5.828e-05 0.00% Castro::advance() 10 3.551e-05 4.95e-05 5.409e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.718e-05 2.989e-05 4.157e-05 0.00% Castro::post_timestep() 10 1.696e-05 2.397e-05 3.223e-05 0.00% Castro::enforce_speed_limit() 62 2.331e-05 2.702e-05 3.141e-05 0.00% Castro::check_for_nan() 20 2.077e-05 2.569e-05 3.039e-05 0.00% FabArrayBase::CPC::define() 2 2.07e-05 2.571e-05 2.977e-05 0.00% Amr::defBaseLevel() 1 1.829e-05 2.086e-05 2.355e-05 0.00% Gravity::swapTimeLevels() 10 5.615e-06 1.202e-05 1.497e-05 0.00% Amr::initSubcycle() 1 8.462e-06 1.047e-05 1.444e-05 0.00% Castro::create_source_corrector() 10 6.958e-06 1.069e-05 1.377e-05 0.00% Castro::computeNewDt() 9 8.599e-06 9.89e-06 1.204e-05 0.00% Gravity::set_mass_offset() 10 5.979e-06 9.482e-06 1.159e-05 0.00% Castro::FluxRegCrseInit 10 5.754e-06 8.446e-06 1.094e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.868e-06 5.358e-06 9.33e-06 0.00% Castro::retry_advance_ctu() 10 3.895e-06 6.146e-06 8.07e-06 0.00% Castro::post_regrid() 1 2.015e-06 3.237e-06 6.987e-06 0.00% Amr::InitializeInit() 1 1.958e-06 2.928e-06 5.733e-06 0.00% Castro::computeInitialDt() 2 3.276e-06 4.185e-06 5.395e-06 0.00% Castro::post_init() 1 2.76e-06 3.758e-06 4.621e-06 0.00% Castro::FluxRegFineAdd() 10 1.768e-06 2.505e-06 3.286e-06 0.00% Amr::init() 1 1.868e-06 2.413e-06 3.024e-06 0.00% Amr::initialInit() 1 1.492e-06 1.829e-06 2.189e-06 0.00% DistributionMapping::Distribute() 1 8.42e-07 1.178e-06 1.421e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.685 3.686 3.686 100.00% Amr::coarseTimeStep() 10 3.453 3.453 3.453 93.67% Amr::timeStep() 10 3.439 3.44 3.441 93.34% Castro::advance() 10 3.423 3.424 3.424 92.89% Castro::subcycle_advance_ctu() 10 3.349 3.351 3.362 91.21% Castro::do_advance_ctu() 10 3.349 3.351 3.362 91.21% Castro::construct_ctu_hydro_source() 10 2.123 2.415 2.519 68.34% Gravity::make_radial_gravity() 21 0.3389 0.3526 0.3798 10.30% Gravity::get_new_grav_vector() 11 0.2269 0.232 0.2337 6.34% Castro::construct_old_gravity() 10 0.1976 0.2103 0.2319 6.29% Gravity::get_old_grav_vector() 10 0.1967 0.2096 0.2313 6.28% FillPatchIterator::Initialize 41 0.1896 0.1966 0.217 5.89% Amr::init() 1 0.2154 0.2156 0.2157 5.85% Castro::construct_new_gravity() 10 0.2001 0.2045 0.2061 5.59% Amr::initialInit() 1 0.1989 0.1992 0.1993 5.41% FillPatchSingleLevel 41 0.1377 0.1504 0.188 5.10% Castro::initialize_do_advance() 10 0.1672 0.1798 0.1865 5.06% Amr::InitializeInit() 1 0.05911 0.1107 0.1682 4.56% Amr::defBaseLevel() 1 0.0591 0.1106 0.1682 4.56% FabArray::ParallelCopy() 41 0.09242 0.108 0.1506 4.09% Castro::initData() 1 0.04311 0.09222 0.1456 3.95% Castro::estTimeStep() 21 0.0311 0.0911 0.1419 3.85% Amr::FinalizeInit() 1 0.03094 0.08852 0.1402 3.80% Castro::expand_state() 10 0.1224 0.1323 0.1369 3.71% FabArray::ParallelCopy_finish() 41 0.04426 0.06295 0.1227 3.33% Castro::clean_state() 62 0.1126 0.117 0.1193 3.24% Castro::computeInitialDt() 2 0.002196 0.05987 0.1115 3.02% Castro::initialize_advance() 10 0.05744 0.06903 0.07208 1.96% Castro::computeTemp() 63 0.06645 0.06951 0.07188 1.95% FabArray::setVal() 143 0.05632 0.06721 0.06985 1.89% Castro::do_new_sources() 10 0.0536 0.06315 0.06504 1.76% Castro::reset_internal_energy(MultiFab) 63 0.04813 0.05044 0.05226 1.42% Castro::reset_internal_energy(Fab) 1008 0.04783 0.05014 0.05196 1.41% FabArray::ParallelCopy_nowait() 41 0.02785 0.04497 0.05089 1.38% Castro::do_old_sources() 10 0.03347 0.04546 0.04953 1.34% StateDataPhysBCFunct::() 41 0.03549 0.04237 0.04698 1.27% StateData::FillBoundary(geom) 41 0.03541 0.04225 0.04685 1.27% Castro::normalize_species() 62 0.04099 0.04145 0.04216 1.14% Castro::construct_new_source() 50 0.02463 0.02937 0.03034 0.82% Castro::post_init() 1 0.02773 0.02823 0.02839 0.77% Gravity::interpolate_monopole_grav() 21 0.02639 0.02748 0.02786 0.76% Amr::writePlotFile() 2 0.02657 0.02665 0.02679 0.73% Castro::construct_new_gravity_source() 10 0.01976 0.02285 0.02412 0.65% VisMF::Write(FabArray) 2 0.01287 0.01372 0.01799 0.49% Castro::apply_source_to_state() 20 0.008805 0.01447 0.01682 0.46% MultiFab::Saxpy() 20 0.008764 0.01442 0.01676 0.45% Castro::post_timestep() 10 0.01552 0.01599 0.01636 0.44% Castro::Castro() 1 0.01012 0.01164 0.01428 0.39% Castro::check_for_nan() 20 0.009699 0.01134 0.01245 0.34% MultiFab::contains_nan() 20 0.009675 0.01131 0.01242 0.34% FabArray::setDomainBndry() 41 0.004725 0.01037 0.01238 0.34% Castro::construct_old_source() 50 0.005005 0.0102 0.01221 0.33% Castro::construct_old_gravity_source() 10 0.004969 0.01013 0.01212 0.33% Castro::initMFs() 1 0.006792 0.007927 0.01009 0.27% Castro::computeNewDt() 9 0.00874 0.008753 0.008767 0.24% AmrLevel::AmrLevel(dm) 1 0.00558 0.006595 0.008299 0.23% StateData::define() 4 0.005556 0.006565 0.008263 0.22% Castro::enforce_min_density() 62 0.006013 0.006761 0.007208 0.20% Castro::swap_state_time_levels() 10 0.00328 0.004375 0.00462 0.13% Castro::finalize_advance() 10 0.003472 0.003564 0.003706 0.10% Castro::buildMetrics() 1 0.001703 0.002023 0.002584 0.07% Castro::post_regrid() 1 0.00153 0.001624 0.001986 0.05% Castro::finalize_do_advance() 10 0.0007594 0.001485 0.001806 0.05% Amr::InitAmr() 1 0.0003037 0.0003866 0.0005313 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.139e-05 0.0001776 0.0002699 0.01% DistributionMapping::LeastUsedCPUs() 1 5.989e-06 0.0001711 0.0002614 0.01% Castro::enforce_consistent_e() 1 7.699e-05 8.912e-05 0.0001061 0.00% Amr::writeSmallPlotFile() 1 3.175e-05 6.945e-05 8.849e-05 0.00% FabArrayBase::getCPC() 41 6.373e-05 8.128e-05 8.814e-05 0.00% Castro::enforce_speed_limit() 62 2.331e-05 2.702e-05 3.141e-05 0.00% FabArrayBase::CPC::define() 2 2.07e-05 2.571e-05 2.977e-05 0.00% Gravity::swapTimeLevels() 10 5.615e-06 1.202e-05 1.497e-05 0.00% Amr::initSubcycle() 1 8.462e-06 1.047e-05 1.444e-05 0.00% Castro::create_source_corrector() 10 6.958e-06 1.069e-05 1.377e-05 0.00% Gravity::set_mass_offset() 10 5.979e-06 9.482e-06 1.159e-05 0.00% Castro::FluxRegCrseInit 10 5.754e-06 8.446e-06 1.094e-05 0.00% Castro::retry_advance_ctu() 10 3.895e-06 6.146e-06 8.07e-06 0.00% Castro::FluxRegFineAdd() 10 1.768e-06 2.505e-06 3.286e-06 0.00% DistributionMapping::Distribute() 1 8.42e-07 1.178e-06 1.421e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-25-g735c3513153f) finalized