MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.10-25-g735c3513153f) initialized Starting run at 05:40:16 UTC on 2022-11-01. Successfully read inputs file ... Castro git describe: 22.09-11-ga35798916 AMReX git describe: 22.10-25-g735c35131 Microphysics git describe: 22.10-6-gba400003 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015927981 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.364192548 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.347074518 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345478565 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.345476533 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35689251 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351566824 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339286199 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338849601 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.339196389 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340131864 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010403694 seconds Ending run at 05:40:19 UTC on 2022-11-01. Run time = 3.673884201 Run time without initialization = 3.486622478 Average number of zones advanced per microsecond: 0.752 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.671 ... 3.673 ... 3.674 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0830 2.4081 2.5228 68.67% Castro::do_advance_ctu() 10 0.02889 0.145 0.4751 12.93% Gravity::make_radial_gravity() 21 0.3405 0.3532 0.3721 10.13% Castro::initData() 1 0.04093 0.08254 0.1197 3.26% Castro::estTimeStep() 21 0.03375 0.06924 0.1097 2.99% FabArray::ParallelCopy_finish() 41 0.04479 0.06012 0.1032 2.81% FabArray::setVal() 143 0.06941 0.07241 0.07405 2.02% Castro::reset_internal_energy(Fab) 1008 0.04932 0.05059 0.05191 1.41% FabArray::ParallelCopy_nowait() 41 0.03164 0.04541 0.05074 1.38% StateData::FillBoundary(geom) 41 0.03443 0.04243 0.04735 1.29% Castro::normalize_species() 62 0.0397 0.04154 0.0432 1.18% FillPatchIterator::Initialize 41 0.02468 0.03652 0.0406 1.11% Gravity::interpolate_monopole_grav() 21 0.0256 0.02716 0.0278 0.76% Castro::construct_new_gravity_source() 10 0.02337 0.02386 0.02474 0.67% Castro::expand_state() 10 0.0133 0.01987 0.02312 0.63% Castro::initialize_do_advance() 10 0.01452 0.01835 0.02015 0.55% Castro::computeTemp() 63 0.01791 0.0193 0.0199 0.54% MultiFab::Saxpy() 20 0.01152 0.01505 0.01658 0.45% VisMF::Write(FabArray) 2 0.01232 0.01326 0.01604 0.44% Amr::writePlotFile() 2 0.01049 0.01344 0.0143 0.39% Gravity::get_new_grav_vector() 11 0.01018 0.01217 0.01349 0.37% FabArray::setDomainBndry() 41 0.00608 0.01078 0.01279 0.35% MultiFab::contains_nan() 20 0.01054 0.01162 0.01273 0.35% Castro::construct_old_gravity_source() 10 0.006871 0.01079 0.01219 0.33% Castro::initialize_advance() 10 0.01053 0.01089 0.01179 0.32% Gravity::get_old_grav_vector() 10 0.006206 0.00969 0.01111 0.30% Castro::initMFs() 1 0.006809 0.007229 0.008446 0.23% main() 1 0.004565 0.006471 0.007303 0.20% Castro::construct_new_source() 50 0.005151 0.006625 0.007244 0.20% Castro::enforce_min_density() 62 0.006426 0.006772 0.007124 0.19% StateData::define() 4 0.0056 0.005778 0.006276 0.17% Castro::swap_state_time_levels() 10 0.003458 0.004652 0.004843 0.13% Amr::coarseTimeStep() 10 0.001676 0.002553 0.004012 0.11% Castro::finalize_advance() 10 0.003407 0.003497 0.003709 0.10% Castro::finalize_do_advance() 10 0.001803 0.002125 0.002454 0.07% Castro::buildMetrics() 1 0.001601 0.001663 0.001818 0.05% Amr::timeStep() 10 0.0001737 0.0002359 0.0005062 0.01% Amr::InitAmr() 1 0.0002843 0.0003068 0.0004083 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002914 0.0002999 0.000311 0.01% Castro::clean_state() 62 0.0001587 0.0001703 0.0001773 0.00% StateDataPhysBCFunct::() 41 9.641e-05 0.00012 0.0001325 0.00% DistributionMapping::LeastUsedCPUs() 1 7.333e-06 0.0001108 0.0001308 0.00% Castro::enforce_consistent_e() 1 7.856e-05 8.801e-05 0.0001028 0.00% FabArray::ParallelCopy() 41 6.865e-05 8.532e-05 9.983e-05 0.00% Castro::do_old_sources() 10 3.921e-05 7.211e-05 9.933e-05 0.00% Castro::construct_old_source() 50 3.381e-05 7.48e-05 9.416e-05 0.00% Castro::do_new_sources() 10 4.123e-05 7.091e-05 8.43e-05 0.00% Amr::FinalizeInit() 1 4.353e-06 1.486e-05 8.273e-05 0.00% Castro::subcycle_advance_ctu() 10 3.627e-05 4.903e-05 8.187e-05 0.00% FillPatchSingleLevel 41 5.796e-05 7.092e-05 8.162e-05 0.00% Castro::Castro() 1 5.478e-05 6.761e-05 8.064e-05 0.00% Castro::construct_old_gravity() 10 3.524e-05 5.659e-05 7.345e-05 0.00% Amr::writeSmallPlotFile() 1 3.163e-05 5.159e-05 6.518e-05 0.00% Castro::apply_source_to_state() 20 3.489e-05 5.252e-05 6.363e-05 0.00% FabArrayBase::getCPC() 41 5.592e-05 5.944e-05 6.292e-05 0.00% Castro::construct_new_gravity() 10 3.411e-05 4.568e-05 5.761e-05 0.00% Castro::advance() 10 3.363e-05 4.66e-05 5.566e-05 0.00% FabArrayBase::CPC::define() 2 2.201e-05 2.951e-05 4.237e-05 0.00% Castro::check_for_nan() 20 2.085e-05 2.653e-05 3.326e-05 0.00% Castro::enforce_speed_limit() 62 2.481e-05 2.783e-05 3.047e-05 0.00% Amr::defBaseLevel() 1 1.804e-05 2.313e-05 3.029e-05 0.00% Castro::post_timestep() 10 1.808e-05 2.15e-05 2.815e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.345e-05 1.834e-05 2.744e-05 0.00% Gravity::swapTimeLevels() 10 7.044e-06 1.234e-05 1.519e-05 0.00% Castro::create_source_corrector() 10 8.2e-06 1.1e-05 1.39e-05 0.00% Gravity::set_mass_offset() 10 7.421e-06 9.928e-06 1.216e-05 0.00% Castro::computeNewDt() 9 8.163e-06 9.495e-06 1.15e-05 0.00% Castro::FluxRegCrseInit 10 6.323e-06 8.414e-06 1.06e-05 0.00% Amr::initSubcycle() 1 8.106e-06 8.911e-06 9.745e-06 0.00% Castro::retry_advance_ctu() 10 4.068e-06 5.876e-06 7.981e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.52e-06 4.524e-06 6.219e-06 0.00% Amr::InitializeInit() 1 2.109e-06 3.127e-06 5.551e-06 0.00% Castro::post_init() 1 3.463e-06 4.104e-06 5.334e-06 0.00% Castro::computeInitialDt() 2 2.804e-06 3.521e-06 4.749e-06 0.00% Castro::post_regrid() 1 1.743e-06 2.673e-06 3.892e-06 0.00% Amr::init() 1 1.973e-06 2.479e-06 3.309e-06 0.00% Castro::FluxRegFineAdd() 10 1.972e-06 2.245e-06 2.452e-06 0.00% Amr::initialInit() 1 1.395e-06 1.745e-06 2.143e-06 0.00% DistributionMapping::Distribute() 1 8.6e-07 1.059e-06 1.349e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.671 3.673 3.674 100.00% Amr::coarseTimeStep() 10 3.469 3.469 3.469 94.42% Amr::timeStep() 10 3.455 3.456 3.457 94.11% Castro::advance() 10 3.44 3.44 3.44 93.64% Castro::subcycle_advance_ctu() 10 3.361 3.363 3.366 91.61% Castro::do_advance_ctu() 10 3.361 3.363 3.366 91.61% Castro::construct_ctu_hydro_source() 10 2.083 2.408 2.523 68.67% Gravity::make_radial_gravity() 21 0.3405 0.3532 0.3721 10.13% Gravity::get_new_grav_vector() 11 0.2263 0.2311 0.2337 6.36% Castro::construct_old_gravity() 10 0.2015 0.2129 0.2291 6.24% Gravity::get_old_grav_vector() 10 0.2005 0.2121 0.2284 6.22% Castro::construct_new_gravity() 10 0.2008 0.2049 0.2074 5.64% FillPatchIterator::Initialize 41 0.19 0.1956 0.2021 5.50% Castro::initialize_do_advance() 10 0.1662 0.181 0.1896 5.16% Amr::init() 1 0.1867 0.1868 0.1869 5.09% FillPatchSingleLevel 41 0.1374 0.1483 0.1714 4.66% Amr::initialInit() 1 0.1704 0.1706 0.1707 4.65% Amr::InitializeInit() 1 0.06196 0.104 0.141 3.84% Amr::defBaseLevel() 1 0.06196 0.104 0.141 3.84% Castro::expand_state() 10 0.1213 0.1319 0.1383 3.77% FabArray::ParallelCopy() 41 0.09394 0.1057 0.135 3.67% Castro::initData() 1 0.04508 0.08663 0.1241 3.38% Castro::clean_state() 62 0.113 0.1178 0.1205 3.28% Castro::estTimeStep() 21 0.03375 0.06924 0.1097 2.99% Amr::FinalizeInit() 1 0.02949 0.06664 0.1086 2.96% FabArray::ParallelCopy_finish() 41 0.04479 0.06012 0.1032 2.81% Castro::computeInitialDt() 2 0.002108 0.03913 0.08114 2.21% Castro::initialize_advance() 10 0.07057 0.07369 0.07564 2.06% FabArray::setVal() 143 0.06941 0.07241 0.07405 2.02% Castro::computeTemp() 63 0.06771 0.07019 0.07197 1.96% Castro::do_new_sources() 10 0.06529 0.06558 0.0662 1.80% Castro::reset_internal_energy(MultiFab) 63 0.04961 0.05089 0.05221 1.42% Castro::reset_internal_energy(Fab) 1008 0.04932 0.05059 0.05191 1.41% FabArray::ParallelCopy_nowait() 41 0.03174 0.04549 0.05082 1.38% Castro::do_old_sources() 10 0.03747 0.04697 0.05057 1.38% StateDataPhysBCFunct::() 41 0.03452 0.04255 0.04747 1.29% StateData::FillBoundary(geom) 41 0.03443 0.04243 0.04735 1.29% Castro::normalize_species() 62 0.0397 0.04154 0.0432 1.18% Castro::construct_new_source() 50 0.0299 0.03049 0.03084 0.84% Gravity::interpolate_monopole_grav() 21 0.0256 0.02716 0.0278 0.76% Castro::post_init() 1 0.02681 0.02695 0.02708 0.74% Amr::writePlotFile() 2 0.02653 0.0267 0.02689 0.73% Castro::construct_new_gravity_source() 10 0.02337 0.02386 0.02474 0.67% Castro::post_timestep() 10 0.01476 0.01601 0.01669 0.45% Castro::apply_source_to_state() 20 0.01155 0.0151 0.01664 0.45% MultiFab::Saxpy() 20 0.01152 0.01505 0.01658 0.45% VisMF::Write(FabArray) 2 0.01232 0.01326 0.01604 0.44% FabArray::setDomainBndry() 41 0.00608 0.01078 0.01279 0.35% Castro::check_for_nan() 20 0.01056 0.01165 0.01277 0.35% MultiFab::contains_nan() 20 0.01054 0.01162 0.01273 0.35% Castro::construct_old_source() 50 0.006904 0.01086 0.01228 0.33% Castro::Castro() 1 0.01108 0.01138 0.01223 0.33% Castro::construct_old_gravity_source() 10 0.006871 0.01079 0.01219 0.33% Castro::computeNewDt() 9 0.008789 0.008795 0.008803 0.24% Castro::initMFs() 1 0.006809 0.007229 0.008446 0.23% Castro::enforce_min_density() 62 0.006426 0.006772 0.007124 0.19% AmrLevel::AmrLevel(dm) 1 0.005613 0.005797 0.006297 0.17% StateData::define() 4 0.0056 0.005778 0.006276 0.17% Castro::swap_state_time_levels() 10 0.003458 0.004652 0.004843 0.13% Castro::finalize_advance() 10 0.003418 0.003507 0.003719 0.10% Castro::finalize_do_advance() 10 0.001803 0.002125 0.002454 0.07% Castro::buildMetrics() 1 0.001718 0.001794 0.001969 0.05% Castro::post_regrid() 1 0.001584 0.001639 0.001697 0.05% Amr::InitAmr() 1 0.0002935 0.0003157 0.0004164 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.171e-05 0.0001164 0.0001379 0.00% DistributionMapping::LeastUsedCPUs() 1 7.333e-06 0.0001108 0.0001308 0.00% FabArrayBase::getCPC() 41 8.247e-05 8.895e-05 0.0001045 0.00% Castro::enforce_consistent_e() 1 7.856e-05 8.801e-05 0.0001028 0.00% Amr::writeSmallPlotFile() 1 3.163e-05 5.159e-05 6.518e-05 0.00% FabArrayBase::CPC::define() 2 2.201e-05 2.951e-05 4.237e-05 0.00% Castro::enforce_speed_limit() 62 2.481e-05 2.783e-05 3.047e-05 0.00% Gravity::swapTimeLevels() 10 7.044e-06 1.234e-05 1.519e-05 0.00% Castro::create_source_corrector() 10 8.2e-06 1.1e-05 1.39e-05 0.00% Gravity::set_mass_offset() 10 7.421e-06 9.928e-06 1.216e-05 0.00% Castro::FluxRegCrseInit 10 6.323e-06 8.414e-06 1.06e-05 0.00% Amr::initSubcycle() 1 8.106e-06 8.911e-06 9.745e-06 0.00% Castro::retry_advance_ctu() 10 4.068e-06 5.876e-06 7.981e-06 0.00% Castro::FluxRegFineAdd() 10 1.972e-06 2.245e-06 2.452e-06 0.00% DistributionMapping::Distribute() 1 8.6e-07 1.059e-06 1.349e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.10-25-g735c3513153f) finalized