MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.11-30-ged095ca21072) initialized Starting run at 01:38:14 UTC on 2022-11-22. Successfully read inputs file ... Castro git describe: 22.11-15-g21c9ad1a2 AMReX git describe: 22.11-30-ged095ca21 Microphysics git describe: 22.11-48-g17e6fc5c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01653132 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.374315166 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.345374088 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.343594912 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.34492387 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.351389502 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.346322084 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.338834458 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339738391 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.338137441 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337951279 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01048551 seconds Ending run at 01:38:18 UTC on 2022-11-22. Run time = 3.690395853 Run time without initialization = 3.478683294 Average number of zones advanced per microsecond: 0.754 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.688 ... 3.69 ... 3.69 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1498 2.4256 2.5272 68.48% Castro::do_advance_ctu() 10 0.01436 0.1181 0.4037 10.94% Gravity::make_radial_gravity() 21 0.3239 0.3376 0.3705 10.04% Castro::initData() 1 0.0399 0.08379 0.1398 3.79% Castro::estTimeStep() 21 0.03061 0.08962 0.1359 3.68% FabArray::ParallelCopy_finish() 41 0.03554 0.05734 0.1188 3.22% amrex::Copy() 193 0.04896 0.07756 0.08836 2.39% FabArray::setVal() 143 0.05527 0.06744 0.07143 1.94% Castro::reset_internal_energy(Fab) 1008 0.04691 0.05014 0.0528 1.43% FabArray::ParallelCopy_nowait() 41 0.02827 0.04471 0.04988 1.35% StateData::FillBoundary(geom) 41 0.03778 0.04207 0.04631 1.25% Castro::normalize_species() 62 0.03993 0.04129 0.04247 1.15% FillPatchIterator::Initialize 41 0.02428 0.03604 0.04043 1.10% Gravity::interpolate_monopole_grav() 21 0.02624 0.02766 0.02837 0.77% Castro::construct_new_gravity_source() 10 0.0196 0.02262 0.02354 0.64% Castro::computeTemp() 63 0.01802 0.01925 0.02045 0.55% Castro::initialize_do_advance() 10 0.01014 0.01746 0.01955 0.53% VisMF::Write(FabArray) 2 0.01288 0.01379 0.01672 0.45% FabArray::Saxpy() 20 0.008779 0.01427 0.01617 0.44% FabArray::setDomainBndry() 41 0.004895 0.01035 0.01242 0.34% Amr::writePlotFile() 2 0.007466 0.01077 0.01229 0.33% MultiFab::contains_nan() 20 0.009527 0.01116 0.01225 0.33% Castro::construct_old_gravity_source() 10 0.004958 0.01007 0.01178 0.32% Castro::initialize_advance() 10 0.006687 0.009938 0.01122 0.30% Castro::initMFs() 1 0.006726 0.007133 0.008307 0.23% Castro::construct_new_source() 50 0.004893 0.006503 0.007105 0.19% main() 1 0.004304 0.006155 0.007015 0.19% Castro::enforce_min_density() 62 0.005124 0.006051 0.00676 0.18% StateData::define() 4 0.005559 0.005767 0.006329 0.17% Castro::swap_state_time_levels() 10 0.003625 0.004465 0.005159 0.14% Gravity::get_new_grav_vector() 11 0.002501 0.003911 0.004548 0.12% Amr::coarseTimeStep() 10 0.0009809 0.001964 0.00413 0.11% Gravity::get_old_grav_vector() 10 0.0014 0.002602 0.003179 0.09% Castro::buildMetrics() 1 0.001561 0.001627 0.001821 0.05% Castro::finalize_do_advance() 10 0.0006406 0.001456 0.001696 0.05% Castro::expand_state() 10 0.0007063 0.0008154 0.0009594 0.03% Amr::timeStep() 10 0.0001778 0.0002512 0.0004557 0.01% Amr::InitAmr() 1 0.0002658 0.0003022 0.0004539 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002724 0.0002965 0.0003078 0.01% DistributionMapping::LeastUsedCPUs() 1 6.843e-06 0.0001714 0.000207 0.01% Castro::clean_state() 62 0.0001435 0.0001655 0.00018 0.00% StateDataPhysBCFunct::() 41 8.618e-05 0.0001159 0.0001403 0.00% Castro::finalize_advance() 10 6.999e-05 9.911e-05 0.0001251 0.00% FabArray::ParallelCopy() 41 6.959e-05 8.899e-05 0.0001029 0.00% Castro::enforce_consistent_e() 1 8.676e-05 9.179e-05 0.0001009 0.00% Castro::Castro() 1 5.426e-05 6.605e-05 8.784e-05 0.00% Castro::construct_old_source() 50 4.295e-05 6.951e-05 8.415e-05 0.00% Castro::do_old_sources() 10 3.555e-05 6.899e-05 8.216e-05 0.00% Castro::do_new_sources() 10 4.029e-05 6.776e-05 8.026e-05 0.00% FillPatchSingleLevel 41 6.656e-05 7.345e-05 7.882e-05 0.00% Amr::FinalizeInit() 1 3.84e-06 1.302e-05 7.141e-05 0.00% Amr::writeSmallPlotFile() 1 2.516e-05 5.231e-05 7.032e-05 0.00% Castro::subcycle_advance_ctu() 10 3.169e-05 5.195e-05 6.861e-05 0.00% Castro::advance() 10 3.895e-05 4.957e-05 6.62e-05 0.00% Castro::apply_source_to_state() 20 3.883e-05 5.083e-05 6.305e-05 0.00% FabArrayBase::getCPC() 41 5.096e-05 5.587e-05 6.125e-05 0.00% Castro::construct_old_gravity() 10 3.482e-05 4.652e-05 5.69e-05 0.00% Castro::construct_new_gravity() 10 3.763e-05 4.372e-05 4.847e-05 0.00% Castro::enforce_speed_limit() 62 2.439e-05 3.158e-05 3.85e-05 0.00% FabArrayBase::CPC::define() 2 2.174e-05 2.706e-05 3.677e-05 0.00% Castro::post_timestep() 10 1.382e-05 2.141e-05 3.145e-05 0.00% Castro::check_for_nan() 20 2.034e-05 2.376e-05 2.587e-05 0.00% Amr::defBaseLevel() 1 1.753e-05 2.043e-05 2.404e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.342e-05 1.532e-05 1.822e-05 0.00% Gravity::swapTimeLevels() 10 5.409e-06 1.366e-05 1.802e-05 0.00% Castro::create_source_corrector() 10 6.062e-06 1.075e-05 1.53e-05 0.00% Gravity::set_mass_offset() 10 8.233e-06 1.04e-05 1.339e-05 0.00% Castro::computeNewDt() 9 7.638e-06 9.701e-06 1.142e-05 0.00% Castro::FluxRegCrseInit 10 4.954e-06 7.999e-06 9.963e-06 0.00% Amr::initSubcycle() 1 8.05e-06 8.708e-06 9.693e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.691e-06 4.823e-06 7.147e-06 0.00% Castro::retry_advance_ctu() 10 3.652e-06 5.409e-06 6.789e-06 0.00% Amr::InitializeInit() 1 2.291e-06 2.859e-06 5.831e-06 0.00% Castro::post_regrid() 1 2.001e-06 2.921e-06 4.318e-06 0.00% Castro::computeInitialDt() 2 3.122e-06 3.539e-06 4.287e-06 0.00% Castro::post_init() 1 2.73e-06 3.533e-06 4.239e-06 0.00% Castro::FluxRegFineAdd() 10 1.808e-06 2.377e-06 3.178e-06 0.00% Amr::init() 1 1.739e-06 2.056e-06 2.589e-06 0.00% DistributionMapping::Distribute() 1 9.22e-07 1.195e-06 2.203e-06 0.00% Amr::initialInit() 1 1.065e-06 1.34e-06 1.76e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.688 3.69 3.69 100.00% Amr::coarseTimeStep() 10 3.461 3.461 3.461 93.79% Amr::timeStep() 10 3.447 3.449 3.45 93.49% Castro::advance() 10 3.432 3.433 3.433 93.04% Castro::subcycle_advance_ctu() 10 3.356 3.36 3.371 91.34% Castro::do_advance_ctu() 10 3.356 3.36 3.371 91.34% Castro::construct_ctu_hydro_source() 10 2.15 2.426 2.527 68.48% Gravity::make_radial_gravity() 21 0.3446 0.3568 0.382 10.35% Gravity::get_new_grav_vector() 11 0.2306 0.2332 0.2342 6.35% Castro::construct_old_gravity() 10 0.2038 0.2137 0.2323 6.29% Gravity::get_old_grav_vector() 10 0.2029 0.213 0.2317 6.28% FillPatchIterator::Initialize 41 0.1806 0.1909 0.2145 5.81% Amr::init() 1 0.2111 0.2113 0.2113 5.73% Castro::construct_new_gravity() 10 0.2034 0.205 0.2061 5.59% Amr::initialInit() 1 0.1941 0.1944 0.1946 5.27% FillPatchSingleLevel 41 0.1284 0.1445 0.1852 5.02% Castro::initialize_do_advance() 10 0.1652 0.1736 0.1786 4.84% Amr::InitializeInit() 1 0.06071 0.1052 0.1625 4.40% Amr::defBaseLevel() 1 0.06071 0.1052 0.1625 4.40% FabArray::ParallelCopy() 41 0.08511 0.1022 0.1473 3.99% Castro::initData() 1 0.04397 0.08798 0.144 3.90% Castro::estTimeStep() 21 0.03061 0.08962 0.1359 3.68% Amr::FinalizeInit() 1 0.03213 0.08919 0.1337 3.62% Castro::expand_state() 10 0.1208 0.1258 0.1293 3.50% Castro::clean_state() 62 0.1095 0.1162 0.1214 3.29% FabArray::ParallelCopy_finish() 41 0.03554 0.05734 0.1188 3.22% Castro::computeInitialDt() 2 0.002474 0.05982 0.1043 2.83% amrex::Copy() 193 0.04896 0.07756 0.08836 2.39% Castro::computeTemp() 63 0.06522 0.06969 0.07355 1.99% Castro::initialize_advance() 10 0.05773 0.06968 0.07336 1.99% FabArray::setVal() 143 0.05527 0.06744 0.07143 1.94% Castro::do_new_sources() 10 0.0533 0.06273 0.06471 1.75% Castro::reset_internal_energy(MultiFab) 63 0.0472 0.05044 0.0531 1.44% Castro::reset_internal_energy(Fab) 1008 0.04691 0.05014 0.0528 1.43% FabArray::ParallelCopy_nowait() 41 0.02835 0.0448 0.04997 1.35% Castro::do_old_sources() 10 0.03286 0.04509 0.04906 1.33% StateDataPhysBCFunct::() 41 0.03786 0.04219 0.04644 1.26% StateData::FillBoundary(geom) 41 0.03778 0.04207 0.04631 1.25% Castro::normalize_species() 62 0.03993 0.04129 0.04247 1.15% Castro::construct_new_source() 50 0.02449 0.02912 0.03047 0.83% Castro::post_init() 1 0.02877 0.02898 0.02918 0.79% Gravity::interpolate_monopole_grav() 21 0.02624 0.02766 0.02837 0.77% Amr::writePlotFile() 2 0.02719 0.02746 0.02774 0.75% Castro::construct_new_gravity_source() 10 0.0196 0.02262 0.02354 0.64% VisMF::Write(FabArray) 2 0.01288 0.01379 0.01672 0.45% Castro::post_timestep() 10 0.01473 0.01581 0.01659 0.45% Castro::apply_source_to_state() 20 0.008822 0.01432 0.01624 0.44% FabArray::Saxpy() 20 0.008779 0.01427 0.01617 0.44% FabArray::setDomainBndry() 41 0.004895 0.01035 0.01242 0.34% Castro::check_for_nan() 20 0.009549 0.01118 0.01227 0.33% MultiFab::contains_nan() 20 0.009527 0.01116 0.01225 0.33% Castro::Castro() 1 0.0109 0.0112 0.01201 0.33% Castro::construct_old_source() 50 0.005001 0.01014 0.01186 0.32% Castro::construct_old_gravity_source() 10 0.004958 0.01007 0.01178 0.32% Castro::computeNewDt() 9 0.008874 0.008882 0.008889 0.24% Castro::initMFs() 1 0.006726 0.007133 0.008307 0.23% Castro::enforce_min_density() 62 0.005124 0.006051 0.00676 0.18% AmrLevel::AmrLevel(dm) 1 0.005577 0.005782 0.006347 0.17% StateData::define() 4 0.005559 0.005767 0.006329 0.17% Castro::swap_state_time_levels() 10 0.003625 0.004465 0.005159 0.14% Castro::finalize_advance() 10 0.003067 0.003452 0.003619 0.10% Castro::buildMetrics() 1 0.001676 0.001755 0.001975 0.05% Castro::post_regrid() 1 0.001564 0.001677 0.001954 0.05% Castro::finalize_do_advance() 10 0.0006406 0.001456 0.001696 0.05% Amr::InitAmr() 1 0.0002744 0.0003109 0.0004634 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.178e-05 0.0001774 0.0002137 0.01% DistributionMapping::LeastUsedCPUs() 1 6.843e-06 0.0001714 0.000207 0.01% Castro::enforce_consistent_e() 1 8.676e-05 9.179e-05 0.0001009 0.00% FabArrayBase::getCPC() 41 7.512e-05 8.293e-05 9.801e-05 0.00% Amr::writeSmallPlotFile() 1 2.516e-05 5.231e-05 7.032e-05 0.00% Castro::enforce_speed_limit() 62 2.439e-05 3.158e-05 3.85e-05 0.00% FabArrayBase::CPC::define() 2 2.174e-05 2.706e-05 3.677e-05 0.00% Gravity::swapTimeLevels() 10 5.409e-06 1.366e-05 1.802e-05 0.00% Castro::create_source_corrector() 10 6.062e-06 1.075e-05 1.53e-05 0.00% Gravity::set_mass_offset() 10 8.233e-06 1.04e-05 1.339e-05 0.00% Castro::FluxRegCrseInit 10 4.954e-06 7.999e-06 9.963e-06 0.00% Amr::initSubcycle() 1 8.05e-06 8.708e-06 9.693e-06 0.00% Castro::retry_advance_ctu() 10 3.652e-06 5.409e-06 6.789e-06 0.00% Castro::FluxRegFineAdd() 10 1.808e-06 2.377e-06 3.178e-06 0.00% DistributionMapping::Distribute() 1 9.22e-07 1.195e-06 2.203e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.11-30-ged095ca21072) finalized