MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.11-20-g46e487c72973) initialized Starting run at 06:40:04 UTC on 2022-11-21. Successfully read inputs file ... Castro git describe: 22.11-13-ga00eb1604 AMReX git describe: 22.11-20-g46e487c72 Microphysics git describe: 22.11-34-ga3c8e568 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015580404 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.360434535 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.346054259 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344348926 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.344800191 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354719086 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.35136811 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339133129 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.339948906 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33998961 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.340297038 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010334376 seconds Ending run at 06:40:08 UTC on 2022-11-21. Run time = 3.66819714 Run time without initialization = 3.479088138 Average number of zones advanced per microsecond: 0.753 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.666 ... 3.668 ... 3.668 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0863 2.4057 2.5293 68.95% Castro::do_advance_ctu() 10 0.02948 0.1531 0.4764 12.99% Gravity::make_radial_gravity() 21 0.3386 0.352 0.3764 10.26% Castro::initData() 1 0.03974 0.08001 0.1161 3.17% FabArray::ParallelCopy_finish() 41 0.04059 0.06052 0.1156 3.15% Castro::estTimeStep() 21 0.03054 0.06917 0.1071 2.92% FabArray::setVal() 143 0.06296 0.07036 0.07282 1.99% Castro::reset_internal_energy(Fab) 1008 0.04811 0.0502 0.05209 1.42% FabArray::ParallelCopy_nowait() 41 0.02851 0.04493 0.05067 1.38% StateData::FillBoundary(geom) 41 0.03546 0.04127 0.0452 1.23% Castro::normalize_species() 62 0.03899 0.04131 0.04345 1.18% FillPatchIterator::Initialize 41 0.02357 0.03622 0.0407 1.11% Gravity::interpolate_monopole_grav() 21 0.02568 0.02732 0.02792 0.76% Castro::construct_new_gravity_source() 10 0.0198 0.02295 0.02378 0.65% Castro::expand_state() 10 0.009657 0.01869 0.02237 0.61% Castro::initialize_do_advance() 10 0.009535 0.01746 0.02011 0.55% Castro::computeTemp() 63 0.01737 0.01903 0.01988 0.54% MultiFab::Saxpy() 20 0.01051 0.01465 0.01641 0.45% VisMF::Write(FabArray) 2 0.01226 0.01304 0.01566 0.43% Amr::writePlotFile() 2 0.01046 0.01306 0.01362 0.37% Gravity::get_new_grav_vector() 11 0.007476 0.01155 0.01311 0.36% FabArray::setDomainBndry() 41 0.0049 0.01041 0.01252 0.34% MultiFab::contains_nan() 20 0.01007 0.01121 0.0123 0.34% Castro::construct_old_gravity_source() 10 0.004965 0.01027 0.01202 0.33% Castro::initialize_advance() 10 0.01054 0.01088 0.01157 0.32% Gravity::get_old_grav_vector() 10 0.005407 0.009548 0.0112 0.31% Castro::initMFs() 1 0.006645 0.006955 0.008553 0.23% Castro::construct_new_source() 50 0.004884 0.006484 0.007072 0.19% main() 1 0.004246 0.006179 0.006959 0.19% Castro::enforce_min_density() 62 0.005615 0.006131 0.006647 0.18% StateData::define() 4 0.005578 0.00582 0.006472 0.18% Castro::swap_state_time_levels() 10 0.003519 0.004666 0.004873 0.13% Amr::coarseTimeStep() 10 0.001818 0.003085 0.004732 0.13% Amr::InitAmr() 1 0.0002698 0.0008192 0.004572 0.12% DistributionMapping::LeastUsedCPUs() 1 6.856e-06 0.003761 0.004311 0.12% Castro::finalize_advance() 10 0.003438 0.003533 0.003888 0.11% Castro::buildMetrics() 1 0.001588 0.001637 0.00185 0.05% Castro::finalize_do_advance() 10 0.0006462 0.001511 0.00184 0.05% Amr::timeStep() 10 0.0002082 0.0002637 0.0004457 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002918 0.0003065 0.0003246 0.01% Castro::clean_state() 62 0.0001526 0.0001845 0.0002291 0.01% StateDataPhysBCFunct::() 41 0.0001007 0.0001218 0.0001374 0.00% Castro::Castro() 1 5.194e-05 7.656e-05 0.0001147 0.00% Castro::enforce_consistent_e() 1 7.93e-05 8.761e-05 0.0001049 0.00% FabArray::ParallelCopy() 41 7.445e-05 8.824e-05 0.0001007 0.00% Castro::construct_old_source() 50 4.181e-05 7.535e-05 9.489e-05 0.00% Castro::do_new_sources() 10 4.21e-05 7.2e-05 8.857e-05 0.00% Amr::FinalizeInit() 1 3.625e-06 1.532e-05 8.739e-05 0.00% Castro::do_old_sources() 10 4.062e-05 6.966e-05 8.635e-05 0.00% FillPatchSingleLevel 41 6.71e-05 7.43e-05 8.147e-05 0.00% Castro::advance() 10 3.75e-05 5.717e-05 7.784e-05 0.00% Amr::writeSmallPlotFile() 1 2.467e-05 6.032e-05 7.51e-05 0.00% Castro::subcycle_advance_ctu() 10 4.036e-05 5.515e-05 7.03e-05 0.00% Castro::apply_source_to_state() 20 4.397e-05 5.323e-05 6.824e-05 0.00% FabArrayBase::getCPC() 41 5.187e-05 5.904e-05 6.808e-05 0.00% Castro::construct_new_gravity() 10 3.904e-05 4.913e-05 6.726e-05 0.00% Castro::construct_old_gravity() 10 4.048e-05 5.551e-05 6.697e-05 0.00% Amr::defBaseLevel() 1 2.194e-05 3.102e-05 5.236e-05 0.00% Castro::enforce_speed_limit() 62 2.317e-05 2.949e-05 3.716e-05 0.00% FabArrayBase::CPC::define() 2 2.411e-05 2.761e-05 3.267e-05 0.00% Castro::post_timestep() 10 1.86e-05 2.375e-05 3.226e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.497e-05 2.066e-05 3.169e-05 0.00% Castro::check_for_nan() 20 2.071e-05 2.314e-05 2.765e-05 0.00% Gravity::swapTimeLevels() 10 7.058e-06 1.277e-05 1.614e-05 0.00% Castro::create_source_corrector() 10 7.039e-06 1.104e-05 1.355e-05 0.00% Gravity::set_mass_offset() 10 7.091e-06 1.028e-05 1.208e-05 0.00% Castro::computeNewDt() 9 8.392e-06 9.845e-06 1.16e-05 0.00% Castro::FluxRegCrseInit 10 4.793e-06 7.987e-06 9.746e-06 0.00% Amr::initSubcycle() 1 7.784e-06 8.437e-06 9.332e-06 0.00% Castro::post_init() 1 3.441e-06 5.387e-06 8.938e-06 0.00% Amr::InitializeInit() 1 6.128e-06 7.745e-06 8.917e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.731e-06 4.901e-06 8.223e-06 0.00% Castro::retry_advance_ctu() 10 4.065e-06 5.773e-06 7.265e-06 0.00% Castro::post_regrid() 1 1.952e-06 2.902e-06 4.083e-06 0.00% Castro::computeInitialDt() 2 2.73e-06 3.25e-06 4.045e-06 0.00% Castro::FluxRegFineAdd() 10 1.929e-06 2.544e-06 3.586e-06 0.00% Amr::init() 1 1.622e-06 2.08e-06 3.066e-06 0.00% Amr::initialInit() 1 1.216e-06 1.452e-06 1.749e-06 0.00% DistributionMapping::Distribute() 1 8.94e-07 1.002e-06 1.106e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.666 3.668 3.668 100.00% Amr::coarseTimeStep() 10 3.462 3.462 3.462 94.37% Amr::timeStep() 10 3.447 3.449 3.45 94.05% Castro::advance() 10 3.432 3.433 3.433 93.58% Castro::subcycle_advance_ctu() 10 3.354 3.356 3.359 91.56% Castro::do_advance_ctu() 10 3.354 3.356 3.359 91.56% Castro::construct_ctu_hydro_source() 10 2.086 2.406 2.529 68.95% Gravity::make_radial_gravity() 21 0.3386 0.352 0.3764 10.26% Gravity::get_new_grav_vector() 11 0.2277 0.2316 0.2341 6.38% Castro::construct_old_gravity() 10 0.1989 0.2107 0.2304 6.28% Gravity::get_old_grav_vector() 10 0.198 0.2099 0.2299 6.27% FillPatchIterator::Initialize 41 0.185 0.1937 0.2084 5.68% Castro::construct_new_gravity() 10 0.2001 0.2034 0.2058 5.61% Amr::init() 1 0.1844 0.1882 0.1887 5.14% Castro::initialize_do_advance() 10 0.1583 0.1766 0.1853 5.05% FillPatchSingleLevel 41 0.1325 0.1471 0.1799 4.91% Amr::initialInit() 1 0.1687 0.1725 0.1733 4.72% FabArray::ParallelCopy() 41 0.08971 0.1056 0.1443 3.93% Amr::InitializeInit() 1 0.06227 0.1049 0.1415 3.86% Amr::defBaseLevel() 1 0.06226 0.1049 0.1415 3.86% Castro::expand_state() 10 0.1213 0.1289 0.1357 3.70% Castro::initData() 1 0.04386 0.08403 0.1204 3.28% Castro::clean_state() 62 0.1105 0.1162 0.1197 3.26% FabArray::ParallelCopy_finish() 41 0.04059 0.06052 0.1156 3.15% Amr::FinalizeInit() 1 0.03171 0.0676 0.108 2.94% Castro::estTimeStep() 21 0.03054 0.06917 0.1071 2.92% Castro::computeInitialDt() 2 0.002087 0.03815 0.07862 2.14% Castro::initialize_advance() 10 0.0701 0.0732 0.07505 2.05% FabArray::setVal() 143 0.06296 0.07036 0.07282 1.99% Castro::computeTemp() 63 0.06577 0.06953 0.07228 1.97% Castro::do_new_sources() 10 0.05425 0.06311 0.06497 1.77% Castro::reset_internal_energy(MultiFab) 63 0.0484 0.0505 0.0524 1.43% Castro::reset_internal_energy(Fab) 1008 0.04811 0.0502 0.05209 1.42% FabArray::ParallelCopy_nowait() 41 0.02861 0.04502 0.05076 1.38% Castro::do_old_sources() 10 0.03404 0.04551 0.04925 1.34% StateDataPhysBCFunct::() 41 0.03556 0.04139 0.04534 1.24% StateData::FillBoundary(geom) 41 0.03546 0.04127 0.0452 1.23% Castro::normalize_species() 62 0.03899 0.04131 0.04345 1.18% Castro::construct_new_source() 50 0.02468 0.02943 0.03074 0.84% Castro::post_init() 1 0.02866 0.02892 0.02925 0.80% Gravity::interpolate_monopole_grav() 21 0.02568 0.02732 0.02792 0.76% Amr::writePlotFile() 2 0.02588 0.0261 0.02636 0.72% Castro::construct_new_gravity_source() 10 0.0198 0.02295 0.02378 0.65% Castro::post_timestep() 10 0.01437 0.01582 0.01669 0.45% Castro::apply_source_to_state() 20 0.01056 0.0147 0.01647 0.45% MultiFab::Saxpy() 20 0.01051 0.01465 0.01641 0.45% VisMF::Write(FabArray) 2 0.01226 0.01304 0.01566 0.43% FabArray::setDomainBndry() 41 0.0049 0.01041 0.01252 0.34% Castro::check_for_nan() 20 0.01009 0.01123 0.01232 0.34% MultiFab::contains_nan() 20 0.01007 0.01121 0.0123 0.34% Castro::Castro() 1 0.01094 0.01121 0.01213 0.33% Castro::construct_old_source() 50 0.005007 0.01035 0.01211 0.33% Castro::construct_old_gravity_source() 10 0.004965 0.01027 0.01202 0.33% Castro::computeNewDt() 9 0.008894 0.008905 0.008912 0.24% Castro::initMFs() 1 0.006645 0.006955 0.008553 0.23% Castro::enforce_min_density() 62 0.005615 0.006131 0.006647 0.18% AmrLevel::AmrLevel(dm) 1 0.005593 0.005841 0.006504 0.18% StateData::define() 4 0.005578 0.00582 0.006472 0.18% Castro::swap_state_time_levels() 10 0.003519 0.004666 0.004873 0.13% Amr::InitAmr() 1 0.0002783 0.0008276 0.00458 0.12% DistributionMapping::SFCProcessorMapDoIt() 1 1.165e-05 0.003767 0.004318 0.12% DistributionMapping::LeastUsedCPUs() 1 6.856e-06 0.003761 0.004311 0.12% Castro::finalize_advance() 10 0.003449 0.003543 0.003895 0.11% Castro::buildMetrics() 1 0.001705 0.001764 0.002004 0.05% Castro::post_regrid() 1 0.001514 0.001615 0.001847 0.05% Castro::finalize_do_advance() 10 0.0006462 0.001511 0.00184 0.05% Castro::enforce_consistent_e() 1 7.93e-05 8.761e-05 0.0001049 0.00% FabArrayBase::getCPC() 41 7.786e-05 8.665e-05 9.961e-05 0.00% Amr::writeSmallPlotFile() 1 2.467e-05 6.032e-05 7.51e-05 0.00% Castro::enforce_speed_limit() 62 2.317e-05 2.949e-05 3.716e-05 0.00% FabArrayBase::CPC::define() 2 2.411e-05 2.761e-05 3.267e-05 0.00% Gravity::swapTimeLevels() 10 7.058e-06 1.277e-05 1.614e-05 0.00% Castro::create_source_corrector() 10 7.039e-06 1.104e-05 1.355e-05 0.00% Gravity::set_mass_offset() 10 7.091e-06 1.028e-05 1.208e-05 0.00% Castro::FluxRegCrseInit 10 4.793e-06 7.987e-06 9.746e-06 0.00% Amr::initSubcycle() 1 7.784e-06 8.437e-06 9.332e-06 0.00% Castro::retry_advance_ctu() 10 4.065e-06 5.773e-06 7.265e-06 0.00% Castro::FluxRegFineAdd() 10 1.929e-06 2.544e-06 3.586e-06 0.00% DistributionMapping::Distribute() 1 8.94e-07 1.002e-06 1.106e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.11-20-g46e487c72973) finalized