MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.11-33-g4d6413c45fa0) initialized Starting run at 06:42:00 UTC on 2022-11-28. Successfully read inputs file ... Castro git describe: 22.11-17-g49ca139a0 AMReX git describe: 22.11-33-g4d6413c45 Microphysics git describe: 22.11-46-gca6d2561 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016461282 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.389545191 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.347029429 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345168271 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.343783926 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.351806223 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.348064481 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.344042183 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.340564509 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.341811055 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.345057574 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010697504 seconds Ending run at 06:42:04 UTC on 2022-11-28. Run time = 3.766918149 Run time without initialization = 3.515663834 Average number of zones advanced per microsecond: 0.746 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.764 ... 3.766 ... 3.767 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1384 2.4289 2.5450 67.56% Castro::do_advance_ctu() 10 0.03371 0.1545 0.4537 12.04% Gravity::make_radial_gravity() 21 0.3284 0.3446 0.3791 10.06% Castro::estTimeStep() 21 0.02927 0.1123 0.179 4.75% Castro::initData() 1 0.03967 0.08945 0.1621 4.30% FabArray::ParallelCopy_finish() 41 0.03744 0.05997 0.1307 3.47% amrex::Copy() 193 0.04685 0.07753 0.08782 2.33% FabArray::setVal() 143 0.04813 0.0655 0.07035 1.87% Castro::reset_internal_energy(Fab) 1008 0.04492 0.05011 0.05264 1.40% FabArray::ParallelCopy_nowait() 41 0.02775 0.04483 0.05029 1.34% StateData::FillBoundary(geom) 41 0.03561 0.04155 0.04515 1.20% Castro::normalize_species() 62 0.03828 0.04132 0.0435 1.15% FillPatchIterator::Initialize 41 0.02421 0.03593 0.04034 1.07% Gravity::interpolate_monopole_grav() 21 0.02542 0.02711 0.02773 0.74% Castro::construct_new_gravity_source() 10 0.0192 0.02256 0.02362 0.63% Castro::computeTemp() 63 0.0169 0.01921 0.02033 0.54% Castro::initialize_do_advance() 10 0.01053 0.01734 0.01953 0.52% VisMF::Write(FabArray) 2 0.01288 0.01366 0.01694 0.45% FabArray::Saxpy() 20 0.008645 0.01437 0.01613 0.43% FabArray::setDomainBndry() 41 0.004828 0.01035 0.01251 0.33% Amr::writePlotFile() 2 0.007174 0.01095 0.01246 0.33% MultiFab::contains_nan() 20 0.009187 0.01096 0.01198 0.32% Castro::initMFs() 1 0.006787 0.008068 0.01184 0.31% Castro::construct_old_gravity_source() 10 0.004886 0.01006 0.01163 0.31% Castro::initialize_advance() 10 0.003259 0.008771 0.01073 0.28% StateData::define() 4 0.005611 0.006717 0.009322 0.25% main() 1 0.00457 0.006528 0.007353 0.20% Castro::construct_new_source() 50 0.004753 0.006469 0.007101 0.19% Castro::enforce_min_density() 62 0.005145 0.006032 0.006501 0.17% Amr::coarseTimeStep() 10 0.001418 0.002394 0.004895 0.13% Gravity::get_new_grav_vector() 11 0.002701 0.003914 0.004732 0.13% Castro::swap_state_time_levels() 10 0.003348 0.004431 0.004702 0.12% Gravity::get_old_grav_vector() 10 0.001402 0.002647 0.003191 0.08% Castro::buildMetrics() 1 0.001591 0.00187 0.002673 0.07% Castro::finalize_do_advance() 10 0.0006181 0.001574 0.001926 0.05% Castro::expand_state() 10 0.0007485 0.0009013 0.001109 0.03% Amr::InitAmr() 1 0.000275 0.0004149 0.0005569 0.01% Amr::timeStep() 10 0.0001866 0.0002623 0.0004358 0.01% DistributionMapping::LeastUsedCPUs() 1 6.753e-06 0.0001962 0.0003631 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002761 0.0002989 0.0003266 0.01% Castro::clean_state() 62 0.0001517 0.0001672 0.0001782 0.00% Castro::enforce_consistent_e() 1 8.525e-05 9.939e-05 0.0001495 0.00% StateDataPhysBCFunct::() 41 0.0001009 0.0001115 0.0001227 0.00% Castro::finalize_advance() 10 7.248e-05 9.731e-05 0.0001186 0.00% FabArray::ParallelCopy() 41 7.524e-05 8.15e-05 9.041e-05 0.00% Castro::construct_old_source() 50 4.333e-05 7.482e-05 8.911e-05 0.00% FillPatchSingleLevel 41 7.199e-05 7.875e-05 8.819e-05 0.00% Castro::do_old_sources() 10 4.076e-05 7.009e-05 8.369e-05 0.00% Castro::do_new_sources() 10 4.516e-05 6.891e-05 8.285e-05 0.00% Castro::Castro() 1 5.574e-05 6.88e-05 8.274e-05 0.00% FabArrayBase::getCPC() 41 4.963e-05 6.58e-05 7.844e-05 0.00% Castro::subcycle_advance_ctu() 10 3.619e-05 5.507e-05 7.432e-05 0.00% Amr::writeSmallPlotFile() 1 2.515e-05 6.16e-05 6.954e-05 0.00% Amr::FinalizeInit() 1 4.499e-06 1.292e-05 6.731e-05 0.00% Castro::apply_source_to_state() 20 3.92e-05 5.265e-05 6.029e-05 0.00% Castro::construct_old_gravity() 10 3.726e-05 4.681e-05 5.582e-05 0.00% Castro::construct_new_gravity() 10 3.779e-05 4.551e-05 5.298e-05 0.00% Castro::advance() 10 3.331e-05 4.444e-05 5.079e-05 0.00% Amr::defBaseLevel() 1 2.136e-05 2.977e-05 3.72e-05 0.00% Castro::enforce_speed_limit() 62 2.63e-05 3.01e-05 3.434e-05 0.00% FabArrayBase::CPC::define() 2 2.079e-05 2.466e-05 3.1e-05 0.00% Castro::post_timestep() 10 1.63e-05 2.15e-05 2.776e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.272e-06 1.461e-05 2.57e-05 0.00% Castro::check_for_nan() 20 2.001e-05 2.344e-05 2.537e-05 0.00% Amr::initSubcycle() 1 8.125e-06 1.173e-05 1.63e-05 0.00% Gravity::swapTimeLevels() 10 6.3e-06 1.303e-05 1.627e-05 0.00% Gravity::set_mass_offset() 10 8.667e-06 1.152e-05 1.423e-05 0.00% Castro::create_source_corrector() 10 6.523e-06 1.08e-05 1.392e-05 0.00% Castro::computeNewDt() 9 8.123e-06 9.536e-06 1.198e-05 0.00% Castro::computeInitialDt() 2 3.282e-06 4.965e-06 1.185e-05 0.00% Castro::post_init() 1 2.625e-06 4.694e-06 9.786e-06 0.00% Castro::FluxRegCrseInit 10 5.251e-06 7.526e-06 9.415e-06 0.00% Castro::retry_advance_ctu() 10 3.826e-06 5.83e-06 8.219e-06 0.00% Castro::post_regrid() 1 2.209e-06 3.461e-06 6.899e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.575e-06 4.761e-06 5.805e-06 0.00% Amr::InitializeInit() 1 1.983e-06 2.724e-06 4.697e-06 0.00% Castro::FluxRegFineAdd() 10 1.91e-06 2.417e-06 2.941e-06 0.00% Amr::init() 1 1.675e-06 2.125e-06 2.654e-06 0.00% Amr::initialInit() 1 1.144e-06 1.537e-06 1.982e-06 0.00% DistributionMapping::Distribute() 1 8.73e-07 1.295e-06 1.751e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.764 3.766 3.767 100.00% Amr::coarseTimeStep() 10 3.498 3.498 3.498 92.85% Amr::timeStep() 10 3.482 3.485 3.486 92.54% Castro::advance() 10 3.468 3.469 3.469 92.09% Castro::subcycle_advance_ctu() 10 3.393 3.398 3.414 90.63% Castro::do_advance_ctu() 10 3.393 3.398 3.414 90.63% Castro::construct_ctu_hydro_source() 10 2.138 2.429 2.545 67.56% Gravity::make_radial_gravity() 21 0.3475 0.3633 0.3894 10.34% Amr::init() 1 0.2505 0.2507 0.2509 6.66% Gravity::get_new_grav_vector() 11 0.2402 0.242 0.2438 6.47% Amr::initialInit() 1 0.2336 0.2339 0.2341 6.22% Castro::construct_old_gravity() 10 0.1991 0.2113 0.2305 6.12% Gravity::get_old_grav_vector() 10 0.1983 0.2105 0.2299 6.10% FillPatchIterator::Initialize 41 0.1811 0.193 0.2255 5.99% Castro::construct_new_gravity() 10 0.2041 0.2057 0.2069 5.49% FillPatchSingleLevel 41 0.1293 0.1467 0.1964 5.21% Amr::InitializeInit() 1 0.06059 0.1129 0.1931 5.13% Amr::defBaseLevel() 1 0.06059 0.1129 0.1931 5.13% Castro::initialize_do_advance() 10 0.1656 0.1747 0.1809 4.80% Castro::estTimeStep() 21 0.02927 0.1123 0.179 4.75% Amr::FinalizeInit() 1 0.04051 0.121 0.1735 4.61% Castro::initData() 1 0.04376 0.09369 0.1673 4.44% FabArray::ParallelCopy() 41 0.08759 0.105 0.1586 4.21% Castro::expand_state() 10 0.121 0.1273 0.1357 3.60% Castro::computeInitialDt() 2 0.002775 0.08314 0.1356 3.60% FabArray::ParallelCopy_finish() 41 0.03744 0.05997 0.1307 3.47% Castro::clean_state() 62 0.1063 0.1161 0.1215 3.23% amrex::Copy() 193 0.04685 0.07753 0.08782 2.33% Castro::computeTemp() 63 0.06253 0.06962 0.0732 1.94% Castro::initialize_advance() 10 0.05011 0.06723 0.07186 1.91% FabArray::setVal() 143 0.04813 0.0655 0.07035 1.87% Castro::do_new_sources() 10 0.04963 0.06178 0.06469 1.72% Castro::reset_internal_energy(MultiFab) 63 0.04524 0.05041 0.05294 1.41% Castro::reset_internal_energy(Fab) 1008 0.04492 0.05011 0.05264 1.40% FabArray::ParallelCopy_nowait() 41 0.02785 0.04492 0.05038 1.34% Castro::do_old_sources() 10 0.03203 0.04509 0.04954 1.32% StateDataPhysBCFunct::() 41 0.03571 0.04167 0.04525 1.20% StateData::FillBoundary(geom) 41 0.03561 0.04155 0.04515 1.20% Castro::normalize_species() 62 0.03828 0.04132 0.0435 1.15% Castro::post_init() 1 0.03612 0.03711 0.03759 1.00% Castro::construct_new_source() 50 0.02395 0.02903 0.03057 0.81% Gravity::interpolate_monopole_grav() 21 0.02542 0.02711 0.02773 0.74% Amr::writePlotFile() 2 0.02738 0.02756 0.02771 0.74% Castro::construct_new_gravity_source() 10 0.0192 0.02256 0.02362 0.63% VisMF::Write(FabArray) 2 0.01288 0.01366 0.01694 0.45% Castro::post_timestep() 10 0.01436 0.01605 0.01671 0.44% Castro::Castro() 1 0.0108 0.01224 0.0164 0.44% Castro::apply_source_to_state() 20 0.008684 0.01442 0.01618 0.43% FabArray::Saxpy() 20 0.008645 0.01437 0.01613 0.43% FabArray::setDomainBndry() 41 0.004828 0.01035 0.01251 0.33% Castro::check_for_nan() 20 0.00921 0.01098 0.01201 0.32% MultiFab::contains_nan() 20 0.009187 0.01096 0.01198 0.32% Castro::initMFs() 1 0.006787 0.008068 0.01184 0.31% Castro::construct_old_source() 50 0.00493 0.01014 0.01172 0.31% Castro::construct_old_gravity_source() 10 0.004886 0.01006 0.01163 0.31% AmrLevel::AmrLevel(dm) 1 0.005619 0.006731 0.009339 0.25% StateData::define() 4 0.005611 0.006717 0.009322 0.25% Castro::computeNewDt() 9 0.009154 0.009172 0.009182 0.24% Castro::enforce_min_density() 62 0.005145 0.006032 0.006501 0.17% Castro::swap_state_time_levels() 10 0.003348 0.004431 0.004702 0.12% Castro::finalize_advance() 10 0.003013 0.003416 0.003542 0.09% Castro::buildMetrics() 1 0.001717 0.00202 0.0029 0.08% Castro::post_regrid() 1 0.001505 0.00196 0.002846 0.08% Castro::finalize_do_advance() 10 0.0006181 0.001574 0.001926 0.05% Amr::InitAmr() 1 0.0002838 0.0004267 0.0005732 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.369e-05 0.0002022 0.0003695 0.01% DistributionMapping::LeastUsedCPUs() 1 6.753e-06 0.0001962 0.0003631 0.01% Castro::enforce_consistent_e() 1 8.525e-05 9.939e-05 0.0001495 0.00% FabArrayBase::getCPC() 41 7.2e-05 9.046e-05 0.0001043 0.00% Amr::writeSmallPlotFile() 1 2.515e-05 6.16e-05 6.954e-05 0.00% Castro::enforce_speed_limit() 62 2.63e-05 3.01e-05 3.434e-05 0.00% FabArrayBase::CPC::define() 2 2.079e-05 2.466e-05 3.1e-05 0.00% Amr::initSubcycle() 1 8.125e-06 1.173e-05 1.63e-05 0.00% Gravity::swapTimeLevels() 10 6.3e-06 1.303e-05 1.627e-05 0.00% Gravity::set_mass_offset() 10 8.667e-06 1.152e-05 1.423e-05 0.00% Castro::create_source_corrector() 10 6.523e-06 1.08e-05 1.392e-05 0.00% Castro::FluxRegCrseInit 10 5.251e-06 7.526e-06 9.415e-06 0.00% Castro::retry_advance_ctu() 10 3.826e-06 5.83e-06 8.219e-06 0.00% Castro::FluxRegFineAdd() 10 1.91e-06 2.417e-06 2.941e-06 0.00% DistributionMapping::Distribute() 1 8.73e-07 1.295e-06 1.751e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.11-33-g4d6413c45fa0) finalized