MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.12-1-g4a53367b19e1) initialized Starting run at 19:31:09 UTC on 2022-12-02. Successfully read inputs file ... Castro git describe: 22.12-5-gbe84b5671 AMReX git describe: 22.12-1-g4a53367b1 Microphysics git describe: 22.12-1-gc97ee4a6 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.0156024 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.378894235 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.371587697 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.349482342 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.349780922 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.380064954 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343994562 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.330138601 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.328914287 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.328144529 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.335474414 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.055906628 seconds Ending run at 19:31:13 UTC on 2022-12-02. Run time = 3.773036703 Run time without initialization = 3.559571669 Average number of zones advanced per microsecond: 0.736 Average number of zones advanced per microsecond per rank: 0.092 TinyProfiler total time across processes [min...avg...max]: 3.772 ... 3.773 ... 3.773 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.4540 2.5049 2.5469 67.50% Gravity::make_radial_gravity() 21 0.3391 0.3504 0.3625 9.61% Castro::initData() 1 0.06098 0.09164 0.137 3.63% Castro::do_advance_ctu() 10 0.02649 0.07283 0.1248 3.31% Castro::estTimeStep() 21 0.04026 0.08586 0.1202 3.18% amrex::Copy() 193 0.06117 0.07075 0.07918 2.10% FabArray::setVal() 143 0.0618 0.06741 0.07622 2.02% FabArray::ParallelCopy_finish() 41 0.03401 0.04442 0.07227 1.92% Amr::writePlotFile() 2 0.05252 0.05491 0.05626 1.49% Castro::normalize_species() 62 0.05075 0.05166 0.05208 1.38% Castro::reset_internal_energy(Fab) 1008 0.04649 0.04777 0.04895 1.30% StateData::FillBoundary(geom) 41 0.03635 0.03957 0.04457 1.18% FabArray::ParallelCopy_nowait() 41 0.0367 0.04121 0.04255 1.13% FillPatchIterator::Initialize 41 0.02809 0.03291 0.03588 0.95% Castro::computeTemp() 63 0.02863 0.02915 0.02945 0.78% Gravity::interpolate_monopole_grav() 21 0.02689 0.02706 0.02749 0.73% Castro::construct_new_gravity_source() 10 0.02058 0.02302 0.02584 0.68% Castro::initialize_do_advance() 10 0.01184 0.01684 0.01816 0.48% VisMF::Write(FabArray) 2 0.01341 0.01391 0.01646 0.44% FabArray::Saxpy() 20 0.01235 0.01382 0.01467 0.39% Castro::initialize_advance() 10 0.007998 0.01101 0.01394 0.37% MultiFab::contains_nan() 20 0.009906 0.01072 0.01148 0.30% Castro::construct_old_gravity_source() 10 0.007509 0.01013 0.01078 0.29% Castro::initMFs() 1 0.006813 0.007913 0.01045 0.28% FabArray::setDomainBndry() 41 0.006948 0.008998 0.01006 0.27% StateData::define() 4 0.00566 0.00644 0.008261 0.22% Castro::construct_new_source() 50 0.005888 0.006342 0.006667 0.18% main() 1 0.005246 0.005939 0.006379 0.17% Castro::enforce_min_density() 62 0.005516 0.005888 0.006143 0.16% Castro::swap_state_time_levels() 10 0.003331 0.004328 0.00467 0.12% Gravity::get_new_grav_vector() 11 0.003047 0.003585 0.003919 0.10% Gravity::get_old_grav_vector() 10 0.001793 0.002344 0.002753 0.07% Amr::coarseTimeStep() 10 0.001742 0.002049 0.002489 0.07% Castro::buildMetrics() 1 0.001594 0.001826 0.002359 0.06% Castro::finalize_do_advance() 10 0.0007946 0.001557 0.001889 0.05% Castro::expand_state() 10 0.0006703 0.0008623 0.001055 0.03% Amr::InitAmr() 1 0.0002757 0.0003539 0.0006396 0.02% Amr::timeStep() 10 0.0001806 0.0002439 0.0004983 0.01% DistributionMapping::LeastUsedCPUs() 1 7.567e-06 0.0003368 0.000423 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002798 0.0002933 0.0003109 0.01% Castro::clean_state() 62 0.0001418 0.0001554 0.0001769 0.00% StateDataPhysBCFunct::() 41 8.49e-05 9.848e-05 0.0001292 0.00% Castro::enforce_consistent_e() 1 8.365e-05 9.287e-05 0.0001167 0.00% Castro::finalize_advance() 10 7.701e-05 9.268e-05 0.0001131 0.00% FabArray::ParallelCopy() 41 6.968e-05 8.205e-05 9.097e-05 0.00% Castro::Castro() 1 5.236e-05 6.573e-05 8.508e-05 0.00% Castro::construct_old_source() 50 5.013e-05 6.654e-05 8.083e-05 0.00% Castro::advance() 10 4.791e-05 5.741e-05 7.645e-05 0.00% Castro::subcycle_advance_ctu() 10 3.639e-05 4.581e-05 7.517e-05 0.00% Castro::do_new_sources() 10 5.668e-05 6.399e-05 7.498e-05 0.00% Amr::FinalizeInit() 1 3.91e-06 1.34e-05 7.377e-05 0.00% FillPatchSingleLevel 41 6.258e-05 6.881e-05 7.309e-05 0.00% Castro::do_old_sources() 10 4.789e-05 6.063e-05 7.133e-05 0.00% Amr::writeSmallPlotFile() 1 3.298e-05 5.877e-05 6.92e-05 0.00% FabArrayBase::getCPC() 41 5.065e-05 5.656e-05 6.846e-05 0.00% Castro::construct_new_gravity() 10 3.337e-05 4.48e-05 5.423e-05 0.00% Castro::apply_source_to_state() 20 3.385e-05 4.605e-05 5.42e-05 0.00% Amr::defBaseLevel() 1 1.752e-05 3.11e-05 5.143e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.899e-05 3.794e-05 5.004e-05 0.00% Castro::construct_old_gravity() 10 3.67e-05 4.026e-05 4.661e-05 0.00% FabArrayBase::CPC::define() 2 2.408e-05 2.703e-05 3.614e-05 0.00% Castro::check_for_nan() 20 2.381e-05 2.634e-05 2.957e-05 0.00% Castro::enforce_speed_limit() 62 2.336e-05 2.606e-05 2.811e-05 0.00% Castro::computeNewDt() 9 8.261e-06 1.045e-05 2.116e-05 0.00% Castro::post_timestep() 10 1.449e-05 1.632e-05 1.818e-05 0.00% Gravity::set_mass_offset() 10 8.594e-06 1.04e-05 1.5e-05 0.00% Amr::initSubcycle() 1 8.317e-06 1.016e-05 1.437e-05 0.00% Gravity::swapTimeLevels() 10 9.28e-06 1.101e-05 1.266e-05 0.00% Castro::create_source_corrector() 10 7.659e-06 9.186e-06 1.113e-05 0.00% Castro::FluxRegCrseInit 10 7.312e-06 8.612e-06 1.03e-05 0.00% Castro::retry_advance_ctu() 10 4.281e-06 5.437e-06 8.135e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.478e-06 4.804e-06 6.594e-06 0.00% Amr::InitializeInit() 1 2.287e-06 3.027e-06 6.102e-06 0.00% Castro::computeInitialDt() 2 3.061e-06 4.123e-06 5.409e-06 0.00% Castro::post_init() 1 2.907e-06 3.831e-06 4.871e-06 0.00% Castro::post_regrid() 1 2.304e-06 3.114e-06 4.645e-06 0.00% Castro::FluxRegFineAdd() 10 2.178e-06 2.38e-06 2.897e-06 0.00% Amr::init() 1 1.793e-06 2.253e-06 2.653e-06 0.00% Amr::initialInit() 1 1.127e-06 1.443e-06 1.708e-06 0.00% DistributionMapping::Distribute() 1 8.81e-07 1.142e-06 1.399e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.772 3.773 3.773 100.00% Amr::coarseTimeStep() 10 3.497 3.497 3.497 92.69% Amr::timeStep() 10 3.481 3.481 3.482 92.28% Castro::advance() 10 3.462 3.463 3.463 91.78% Castro::subcycle_advance_ctu() 10 3.379 3.385 3.39 89.85% Castro::do_advance_ctu() 10 3.379 3.385 3.39 89.85% Castro::construct_ctu_hydro_source() 10 2.454 2.505 2.547 67.50% Gravity::make_radial_gravity() 21 0.3553 0.3671 0.3766 9.98% Gravity::get_new_grav_vector() 11 0.2385 0.2411 0.243 6.44% Castro::construct_old_gravity() 10 0.2002 0.2087 0.216 5.73% Gravity::get_old_grav_vector() 10 0.1994 0.208 0.2154 5.71% Castro::construct_new_gravity() 10 0.2101 0.212 0.2134 5.66% Amr::init() 1 0.2126 0.213 0.213 5.65% Amr::initialInit() 1 0.1968 0.1974 0.1979 5.24% FillPatchIterator::Initialize 41 0.1529 0.1674 0.1828 4.85% Castro::initialize_do_advance() 10 0.1538 0.1639 0.1736 4.60% Amr::InitializeInit() 1 0.08386 0.1144 0.1641 4.35% Amr::defBaseLevel() 1 0.08386 0.1144 0.1641 4.35% FillPatchSingleLevel 41 0.115 0.1255 0.1478 3.92% Castro::initData() 1 0.0649 0.09577 0.1409 3.73% Castro::clean_state() 62 0.1319 0.1338 0.1354 3.59% Castro::expand_state() 10 0.1012 0.1125 0.1217 3.23% Castro::estTimeStep() 21 0.04026 0.08586 0.1202 3.18% Amr::FinalizeInit() 1 0.03284 0.08297 0.114 3.02% FabArray::ParallelCopy() 41 0.07595 0.0858 0.1091 2.89% Castro::computeInitialDt() 2 0.002937 0.05273 0.08339 2.21% Castro::initialize_advance() 10 0.06821 0.0742 0.08 2.12% amrex::Copy() 193 0.06117 0.07075 0.07918 2.10% Castro::computeTemp() 63 0.0754 0.0772 0.07852 2.08% FabArray::setVal() 143 0.0618 0.06741 0.07622 2.02% FabArray::ParallelCopy_finish() 41 0.03401 0.04442 0.07227 1.92% Castro::do_new_sources() 10 0.06065 0.06483 0.07214 1.91% Amr::writePlotFile() 2 0.07117 0.07154 0.07188 1.91% Castro::normalize_species() 62 0.05075 0.05166 0.05208 1.38% Castro::reset_internal_energy(MultiFab) 63 0.04677 0.04806 0.04926 1.31% Castro::reset_internal_energy(Fab) 1008 0.04649 0.04777 0.04895 1.30% Castro::do_old_sources() 10 0.04254 0.04714 0.04834 1.28% StateDataPhysBCFunct::() 41 0.03645 0.03967 0.04466 1.18% StateData::FillBoundary(geom) 41 0.03635 0.03957 0.04457 1.18% FabArray::ParallelCopy_nowait() 41 0.03678 0.04129 0.04264 1.13% Castro::construct_new_source() 50 0.02696 0.02936 0.0324 0.86% Castro::post_init() 1 0.02982 0.03012 0.03053 0.81% Gravity::interpolate_monopole_grav() 21 0.02689 0.02706 0.02749 0.73% Castro::construct_new_gravity_source() 10 0.02058 0.02302 0.02584 0.68% Castro::post_timestep() 10 0.01842 0.01865 0.019 0.50% VisMF::Write(FabArray) 2 0.01341 0.01391 0.01646 0.44% Castro::apply_source_to_state() 20 0.01238 0.01386 0.01471 0.39% FabArray::Saxpy() 20 0.01235 0.01382 0.01467 0.39% Castro::Castro() 1 0.01066 0.01182 0.01466 0.39% Castro::computeNewDt() 9 0.01215 0.01216 0.01218 0.32% Castro::check_for_nan() 20 0.009935 0.01074 0.0115 0.30% MultiFab::contains_nan() 20 0.009906 0.01072 0.01148 0.30% Castro::construct_old_source() 50 0.00756 0.01019 0.01086 0.29% Castro::construct_old_gravity_source() 10 0.007509 0.01013 0.01078 0.29% Castro::initMFs() 1 0.006813 0.007913 0.01045 0.28% FabArray::setDomainBndry() 41 0.006948 0.008998 0.01006 0.27% AmrLevel::AmrLevel(dm) 1 0.005689 0.006478 0.008308 0.22% StateData::define() 4 0.00566 0.00644 0.008261 0.22% Castro::enforce_min_density() 62 0.005516 0.005888 0.006143 0.16% Castro::swap_state_time_levels() 10 0.003331 0.004328 0.00467 0.12% Castro::finalize_advance() 10 0.00294 0.00338 0.00394 0.10% Castro::buildMetrics() 1 0.001708 0.001971 0.002581 0.07% Castro::post_regrid() 1 0.001638 0.001742 0.00212 0.06% Castro::finalize_do_advance() 10 0.0007946 0.001557 0.001889 0.05% Amr::InitAmr() 1 0.0002847 0.000364 0.000654 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.282e-05 0.0003428 0.0004306 0.01% DistributionMapping::LeastUsedCPUs() 1 7.567e-06 0.0003368 0.000423 0.01% Castro::enforce_consistent_e() 1 8.365e-05 9.287e-05 0.0001167 0.00% FabArrayBase::getCPC() 41 7.642e-05 8.359e-05 9.66e-05 0.00% Amr::writeSmallPlotFile() 1 3.298e-05 5.877e-05 6.92e-05 0.00% FabArrayBase::CPC::define() 2 2.408e-05 2.703e-05 3.614e-05 0.00% Castro::enforce_speed_limit() 62 2.336e-05 2.606e-05 2.811e-05 0.00% Gravity::set_mass_offset() 10 8.594e-06 1.04e-05 1.5e-05 0.00% Amr::initSubcycle() 1 8.317e-06 1.016e-05 1.437e-05 0.00% Gravity::swapTimeLevels() 10 9.28e-06 1.101e-05 1.266e-05 0.00% Castro::create_source_corrector() 10 7.659e-06 9.186e-06 1.113e-05 0.00% Castro::FluxRegCrseInit 10 7.312e-06 8.612e-06 1.03e-05 0.00% Castro::retry_advance_ctu() 10 4.281e-06 5.437e-06 8.135e-06 0.00% Castro::FluxRegFineAdd() 10 2.178e-06 2.38e-06 2.897e-06 0.00% DistributionMapping::Distribute() 1 8.81e-07 1.142e-06 1.399e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.12-1-g4a53367b19e1) finalized