MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.12-23-g9c76f9ae2cc3) initialized Starting run at 06:47:10 UTC on 2022-12-23. Successfully read inputs file ... Castro git describe: 22.12-9-g8b131d186 AMReX git describe: 22.12-23-g9c76f9ae2 Microphysics git describe: 22.12-28-gdc4a7e21 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.020268933 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.395926533 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.349893176 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.329612693 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.327617403 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355737204 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.329744347 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.312057762 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.3122191 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.313051568 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.311263144 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010876456 seconds Ending run at 06:47:14 UTC on 2022-12-23. Run time = 3.55293022 Run time without initialization = 3.355119299 Average number of zones advanced per microsecond: 0.781 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.552 ... 3.553 ... 3.553 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2912 2.3544 2.3847 67.12% Gravity::make_radial_gravity() 21 0.344 0.3549 0.3675 10.34% Castro::do_advance_ctu() 10 0.04307 0.07637 0.1408 3.96% Castro::estTimeStep() 21 0.02232 0.05594 0.1145 3.22% Castro::initData() 1 0.0381 0.08756 0.1136 3.20% FabArray::setVal() 143 0.06344 0.06912 0.07896 2.22% amrex::Copy() 193 0.06045 0.06988 0.07705 2.17% FabArray::ParallelCopy_finish() 41 0.03922 0.05147 0.07644 2.15% Castro::reset_internal_energy(Fab) 1008 0.04786 0.05048 0.0521 1.47% Castro::normalize_species() 62 0.0413 0.0422 0.04412 1.24% FabArray::ParallelCopy_nowait() 41 0.03599 0.04039 0.04255 1.20% StateData::FillBoundary(geom) 41 0.03353 0.03705 0.04252 1.20% FillPatchIterator::Initialize 41 0.02945 0.03361 0.03772 1.06% Gravity::interpolate_monopole_grav() 21 0.02844 0.02896 0.03006 0.85% Castro::construct_new_gravity_source() 10 0.02364 0.0262 0.02983 0.84% Castro::computeTemp() 63 0.0191 0.02017 0.02112 0.59% VisMF::Write(FabArray) 2 0.01428 0.01562 0.01983 0.56% Castro::initialize_do_advance() 10 0.01278 0.01783 0.0197 0.55% FabArray::Saxpy() 20 0.01269 0.01384 0.0145 0.41% Castro::initialize_advance() 10 0.008493 0.01118 0.0139 0.39% Amr::writePlotFile() 2 0.009125 0.01174 0.01306 0.37% MultiFab::contains_nan() 20 0.01009 0.01097 0.01185 0.33% FabArray::setDomainBndry() 41 0.007882 0.009944 0.01116 0.31% Castro::construct_old_gravity_source() 10 0.007633 0.01004 0.0107 0.30% Castro::initMFs() 1 0.006817 0.008003 0.01026 0.29% StateData::define() 4 0.00566 0.006611 0.008339 0.23% Castro::construct_new_source() 50 0.005754 0.006287 0.006706 0.19% Castro::swap_state_time_levels() 10 0.00331 0.00496 0.006622 0.19% main() 1 0.00501 0.006014 0.006519 0.18% Castro::enforce_min_density() 62 0.005662 0.00601 0.006431 0.18% Gravity::get_new_grav_vector() 11 0.002974 0.003914 0.005642 0.16% Gravity::get_old_grav_vector() 10 0.001826 0.002347 0.002815 0.08% Castro::buildMetrics() 1 0.001604 0.001871 0.002413 0.07% Amr::coarseTimeStep() 10 0.001333 0.001701 0.002398 0.07% Castro::finalize_do_advance() 10 0.0006472 0.001624 0.002027 0.06% Castro::expand_state() 10 0.000682 0.0008396 0.001186 0.03% Amr::timeStep() 10 0.0001619 0.0002379 0.000514 0.01% Amr::InitAmr() 1 0.0002991 0.0003696 0.0005137 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002794 0.0003022 0.0003146 0.01% DistributionMapping::LeastUsedCPUs() 1 6.551e-06 0.0001742 0.0002539 0.01% Castro::clean_state() 62 0.0001332 0.0001537 0.0001762 0.00% Castro::enforce_consistent_e() 1 8.098e-05 0.0001131 0.0001578 0.00% StateDataPhysBCFunct::() 41 8.685e-05 0.0001044 0.0001314 0.00% Castro::finalize_advance() 10 7.829e-05 9.108e-05 0.0001112 0.00% Castro::Castro() 1 5.688e-05 6.8e-05 9.25e-05 0.00% Amr::writeSmallPlotFile() 1 3.099e-05 6.299e-05 9.176e-05 0.00% FabArray::ParallelCopy() 41 6.506e-05 7.281e-05 8.125e-05 0.00% Castro::construct_old_source() 50 4.496e-05 6.504e-05 7.436e-05 0.00% FabArrayBase::getCPC() 41 4.197e-05 5.43e-05 7.171e-05 0.00% FillPatchSingleLevel 41 5.82e-05 6.446e-05 7.142e-05 0.00% Castro::do_old_sources() 10 4.19e-05 5.645e-05 6.948e-05 0.00% Castro::do_new_sources() 10 5.179e-05 5.926e-05 6.849e-05 0.00% Amr::FinalizeInit() 1 4.575e-06 1.324e-05 6.819e-05 0.00% Castro::construct_old_gravity() 10 2.856e-05 3.961e-05 5.935e-05 0.00% Castro::subcycle_advance_ctu() 10 3.592e-05 4.493e-05 5.519e-05 0.00% Castro::apply_source_to_state() 20 3.187e-05 4.043e-05 5.125e-05 0.00% Castro::construct_new_gravity() 10 3.304e-05 3.762e-05 5.028e-05 0.00% Castro::advance() 10 3.41e-05 4.015e-05 4.853e-05 0.00% Castro::enforce_speed_limit() 62 2.483e-05 2.989e-05 4.589e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.934e-05 2.738e-05 3.328e-05 0.00% FabArrayBase::CPC::define() 2 2.41e-05 2.645e-05 3.301e-05 0.00% Amr::defBaseLevel() 1 1.303e-05 1.915e-05 2.887e-05 0.00% Castro::check_for_nan() 20 2.115e-05 2.328e-05 2.601e-05 0.00% Castro::computeNewDt() 9 7.529e-06 1.051e-05 2.578e-05 0.00% Castro::post_timestep() 10 1.415e-05 1.701e-05 2.548e-05 0.00% Amr::initSubcycle() 1 8.487e-06 1.085e-05 1.579e-05 0.00% Gravity::swapTimeLevels() 10 8.483e-06 1.141e-05 1.326e-05 0.00% Gravity::set_mass_offset() 10 9.223e-06 1.019e-05 1.201e-05 0.00% Castro::create_source_corrector() 10 6.781e-06 9.515e-06 1.106e-05 0.00% Castro::FluxRegCrseInit 10 6.339e-06 7.832e-06 9.283e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.785e-06 5.122e-06 7.519e-06 0.00% Castro::retry_advance_ctu() 10 4.385e-06 5.591e-06 7.381e-06 0.00% Amr::InitializeInit() 1 1.952e-06 3.195e-06 5.835e-06 0.00% Castro::computeInitialDt() 2 3.804e-06 4.629e-06 5.725e-06 0.00% Castro::post_init() 1 3.573e-06 4.07e-06 4.792e-06 0.00% Castro::post_regrid() 1 2.297e-06 3.51e-06 4.221e-06 0.00% Amr::init() 1 1.994e-06 2.369e-06 2.736e-06 0.00% Castro::FluxRegFineAdd() 10 2.054e-06 2.252e-06 2.486e-06 0.00% Amr::initialInit() 1 1.331e-06 1.59e-06 2.026e-06 0.00% DistributionMapping::Distribute() 1 8.69e-07 1.073e-06 1.351e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.551 3.552 3.553 100.00% Amr::coarseTimeStep() 10 3.338 3.338 3.338 93.94% Amr::timeStep() 10 3.325 3.326 3.326 93.61% Castro::advance() 10 3.309 3.309 3.31 93.16% Castro::subcycle_advance_ctu() 10 3.228 3.232 3.239 91.15% Castro::do_advance_ctu() 10 3.227 3.232 3.239 91.15% Castro::construct_ctu_hydro_source() 10 2.291 2.354 2.385 67.12% Gravity::make_radial_gravity() 21 0.3591 0.3709 0.3813 10.73% Gravity::get_new_grav_vector() 11 0.237 0.2401 0.2416 6.80% Castro::construct_old_gravity() 10 0.2057 0.2155 0.2219 6.24% Gravity::get_old_grav_vector() 10 0.2049 0.2148 0.2212 6.23% Castro::construct_new_gravity() 10 0.1993 0.2009 0.2021 5.69% Amr::init() 1 0.1971 0.1973 0.1974 5.56% FillPatchIterator::Initialize 41 0.1564 0.1728 0.1837 5.17% Amr::initialInit() 1 0.1768 0.1785 0.1792 5.04% Castro::initialize_do_advance() 10 0.1552 0.167 0.1779 5.01% FillPatchSingleLevel 41 0.1167 0.1292 0.1462 4.12% Amr::InitializeInit() 1 0.05849 0.1106 0.1354 3.81% Amr::defBaseLevel() 1 0.05849 0.1106 0.1354 3.81% Castro::expand_state() 10 0.1054 0.1185 0.1273 3.58% Castro::clean_state() 62 0.1139 0.1182 0.122 3.43% Amr::FinalizeInit() 1 0.0435 0.06791 0.1203 3.39% Castro::initData() 1 0.04196 0.09202 0.1172 3.30% Castro::estTimeStep() 21 0.02232 0.05594 0.1145 3.22% FabArray::ParallelCopy() 41 0.08031 0.09201 0.1126 3.17% Castro::computeInitialDt() 2 0.002663 0.0274 0.07958 2.24% FabArray::setVal() 143 0.06344 0.06912 0.07896 2.22% Castro::initialize_advance() 10 0.06735 0.07347 0.07824 2.20% amrex::Copy() 193 0.06045 0.06988 0.07705 2.17% FabArray::ParallelCopy_finish() 41 0.03922 0.05147 0.07644 2.15% Castro::do_new_sources() 10 0.06055 0.06665 0.07538 2.12% Castro::computeTemp() 63 0.06724 0.07095 0.0735 2.07% Castro::reset_internal_energy(MultiFab) 63 0.04814 0.05078 0.05241 1.48% Castro::reset_internal_energy(Fab) 1008 0.04786 0.05048 0.0521 1.47% Castro::do_old_sources() 10 0.04056 0.04468 0.04632 1.30% Castro::normalize_species() 62 0.0413 0.0422 0.04412 1.24% FabArray::ParallelCopy_nowait() 41 0.03606 0.04047 0.04265 1.20% StateDataPhysBCFunct::() 41 0.03362 0.03716 0.04263 1.20% StateData::FillBoundary(geom) 41 0.03353 0.03705 0.04252 1.20% Castro::post_init() 1 0.03894 0.04021 0.04102 1.15% Castro::construct_new_source() 50 0.0299 0.03248 0.0364 1.02% Amr::writePlotFile() 2 0.02885 0.02975 0.03138 0.88% Gravity::interpolate_monopole_grav() 21 0.02844 0.02896 0.03006 0.85% Castro::construct_new_gravity_source() 10 0.02364 0.0262 0.02983 0.84% VisMF::Write(FabArray) 2 0.01428 0.01562 0.01983 0.56% Castro::post_timestep() 10 0.01561 0.01601 0.01643 0.46% Castro::apply_source_to_state() 20 0.01272 0.01388 0.01454 0.41% Castro::Castro() 1 0.01042 0.01172 0.01451 0.41% FabArray::Saxpy() 20 0.01269 0.01384 0.0145 0.41% Castro::check_for_nan() 20 0.01011 0.01099 0.01187 0.33% MultiFab::contains_nan() 20 0.01009 0.01097 0.01185 0.33% FabArray::setDomainBndry() 41 0.007882 0.009944 0.01116 0.31% Castro::construct_old_source() 50 0.007678 0.01011 0.01077 0.30% Castro::construct_old_gravity_source() 10 0.007633 0.01004 0.0107 0.30% Castro::initMFs() 1 0.006817 0.008003 0.01026 0.29% Castro::computeNewDt() 9 0.00878 0.008812 0.008837 0.25% AmrLevel::AmrLevel(dm) 1 0.005693 0.006638 0.008368 0.24% StateData::define() 4 0.00566 0.006611 0.008339 0.23% Castro::swap_state_time_levels() 10 0.00331 0.00496 0.006622 0.19% Castro::enforce_min_density() 62 0.005662 0.00601 0.006431 0.18% Castro::finalize_advance() 10 0.002957 0.003377 0.003812 0.11% Castro::post_regrid() 1 0.001514 0.001985 0.003028 0.09% Castro::buildMetrics() 1 0.001715 0.00202 0.002633 0.07% Castro::finalize_do_advance() 10 0.0006472 0.001624 0.002027 0.06% Amr::InitAmr() 1 0.000309 0.0003804 0.0005283 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.219e-05 0.0001804 0.0002611 0.01% DistributionMapping::LeastUsedCPUs() 1 6.551e-06 0.0001742 0.0002539 0.01% Castro::enforce_consistent_e() 1 8.098e-05 0.0001131 0.0001578 0.00% FabArrayBase::getCPC() 41 6.682e-05 8.075e-05 9.69e-05 0.00% Amr::writeSmallPlotFile() 1 3.099e-05 6.299e-05 9.176e-05 0.00% Castro::enforce_speed_limit() 62 2.483e-05 2.989e-05 4.589e-05 0.00% FabArrayBase::CPC::define() 2 2.41e-05 2.645e-05 3.301e-05 0.00% Amr::initSubcycle() 1 8.487e-06 1.085e-05 1.579e-05 0.00% Gravity::swapTimeLevels() 10 8.483e-06 1.141e-05 1.326e-05 0.00% Gravity::set_mass_offset() 10 9.223e-06 1.019e-05 1.201e-05 0.00% Castro::create_source_corrector() 10 6.781e-06 9.515e-06 1.106e-05 0.00% Castro::FluxRegCrseInit 10 6.339e-06 7.832e-06 9.283e-06 0.00% Castro::retry_advance_ctu() 10 4.385e-06 5.591e-06 7.381e-06 0.00% Castro::FluxRegFineAdd() 10 2.054e-06 2.252e-06 2.486e-06 0.00% DistributionMapping::Distribute() 1 8.69e-07 1.073e-06 1.351e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.12-23-g9c76f9ae2cc3) finalized