MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.01-23-ge472c108e721) initialized Starting run at 06:47:43 UTC on 2023-01-24. Successfully read inputs file ... Castro git describe: 23.01-18-gbb2758482 AMReX git describe: 23.01-23-ge472c108e Microphysics git describe: 23.01-4-gd64aa25b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015410489 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35633833 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.35964919 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.336774125 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.334895146 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355345898 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342928793 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.314171683 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.31343025 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.313853173 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.313974353 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010720908 seconds Ending run at 06:47:47 UTC on 2023-01-24. Run time = 3.540829459 Run time without initialization = 3.359502997 Average number of zones advanced per microsecond: 0.780 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.539 ... 3.54 ... 3.541 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.3077 2.3575 2.4219 68.40% Gravity::make_radial_gravity() 21 0.3205 0.3282 0.3428 9.68% Castro::do_advance_ctu() 10 0.006326 0.07336 0.1262 3.57% Castro::estTimeStep() 21 0.02107 0.0696 0.1167 3.29% Castro::initData() 1 0.03843 0.07707 0.1131 3.20% FabArray::setVal() 143 0.06463 0.0731 0.0858 2.42% FabArray::ParallelCopy_finish() 41 0.03444 0.05521 0.085 2.40% amrex::Copy() 193 0.06105 0.07456 0.08272 2.34% Castro::reset_internal_energy(Fab) 1008 0.04821 0.04963 0.0514 1.45% Castro::normalize_species() 62 0.04128 0.04237 0.04367 1.23% FabArray::ParallelCopy_nowait() 41 0.03683 0.04178 0.04306 1.22% FillPatchIterator::Initialize 41 0.02805 0.03521 0.03918 1.11% StateData::FillBoundary(geom) 41 0.0345 0.0371 0.03876 1.09% Castro::construct_new_gravity_source() 10 0.02369 0.02729 0.03266 0.92% Gravity::interpolate_monopole_grav() 21 0.02826 0.02912 0.03109 0.88% Castro::initialize_do_advance() 10 0.01182 0.01797 0.02077 0.59% Castro::computeTemp() 63 0.01936 0.01987 0.02075 0.59% VisMF::Write(FabArray) 2 0.01354 0.01442 0.01701 0.48% FabArray::Saxpy() 20 0.01266 0.01437 0.01594 0.45% Castro::initialize_advance() 10 0.008067 0.01108 0.01436 0.41% FabArray::setDomainBndry() 41 0.007971 0.01073 0.01224 0.35% MultiFab::contains_nan() 20 0.0101 0.01072 0.01169 0.33% Castro::construct_old_gravity_source() 10 0.007447 0.01046 0.01148 0.32% Amr::writePlotFile() 2 0.006523 0.009187 0.01113 0.31% Castro::initMFs() 1 0.007022 0.007178 0.00756 0.21% main() 1 0.00523 0.006126 0.006642 0.19% Castro::construct_new_source() 50 0.005872 0.006305 0.006547 0.18% Castro::enforce_min_density() 62 0.005653 0.006022 0.006359 0.18% StateData::define() 4 0.005662 0.005829 0.006291 0.18% Castro::swap_state_time_levels() 10 0.003342 0.004358 0.004698 0.13% Gravity::get_new_grav_vector() 11 0.002872 0.003721 0.004164 0.12% Gravity::get_old_grav_vector() 10 0.001689 0.00254 0.00292 0.08% Amr::coarseTimeStep() 10 0.0009403 0.001981 0.002767 0.08% Castro::buildMetrics() 1 0.00159 0.001632 0.00174 0.05% Castro::finalize_do_advance() 10 0.0006476 0.001458 0.001736 0.05% Castro::expand_state() 10 0.0006717 0.0009694 0.00124 0.04% Amr::timeStep() 10 0.0001693 0.0002475 0.0005261 0.01% Amr::InitAmr() 1 0.0002606 0.0002887 0.0003951 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002784 0.000291 0.0002983 0.01% Castro::clean_state() 62 0.0001292 0.0001419 0.0001512 0.00% Castro::Castro() 1 7.255e-05 9.613e-05 0.0001431 0.00% DistributionMapping::LeastUsedCPUs() 1 7.202e-06 0.0001094 0.0001285 0.00% Castro::finalize_advance() 10 7.592e-05 9.281e-05 0.000115 0.00% StateDataPhysBCFunct::() 41 7.594e-05 9.376e-05 0.0001004 0.00% Castro::enforce_consistent_e() 1 7.354e-05 8.58e-05 9.466e-05 0.00% Castro::construct_old_source() 50 4.454e-05 7.005e-05 9.334e-05 0.00% Amr::FinalizeInit() 1 4.346e-06 1.583e-05 9.174e-05 0.00% FabArray::ParallelCopy() 41 6.034e-05 7.174e-05 8.336e-05 0.00% Amr::writeSmallPlotFile() 1 3.334e-05 5.756e-05 7.754e-05 0.00% Castro::do_old_sources() 10 4.028e-05 5.828e-05 7.494e-05 0.00% FillPatchSingleLevel 41 5.716e-05 6.351e-05 7.219e-05 0.00% Castro::subcycle_advance_ctu() 10 3.431e-05 4.584e-05 6.894e-05 0.00% Castro::do_new_sources() 10 4.863e-05 5.892e-05 6.817e-05 0.00% FabArrayBase::getCPC() 41 4.015e-05 4.858e-05 5.78e-05 0.00% Castro::advance() 10 3.233e-05 3.917e-05 5.275e-05 0.00% Castro::construct_new_gravity() 10 3.387e-05 3.951e-05 5.152e-05 0.00% Castro::construct_old_gravity() 10 3.101e-05 4.073e-05 4.64e-05 0.00% Castro::apply_source_to_state() 20 3.035e-05 4.201e-05 4.619e-05 0.00% Castro::post_timestep() 10 1.458e-05 2.314e-05 4.313e-05 0.00% FabArrayBase::CPC::define() 2 2.139e-05 2.469e-05 3.074e-05 0.00% Castro::enforce_speed_limit() 62 2.425e-05 2.691e-05 3.006e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.648e-05 2.259e-05 2.991e-05 0.00% Castro::check_for_nan() 20 1.929e-05 2.194e-05 2.604e-05 0.00% Amr::defBaseLevel() 1 1.565e-05 2.084e-05 2.574e-05 0.00% Castro::post_init() 1 3.06e-06 7.207e-06 1.902e-05 0.00% Castro::create_source_corrector() 10 6.602e-06 9.753e-06 1.512e-05 0.00% Gravity::set_mass_offset() 10 8.807e-06 9.609e-06 1.149e-05 0.00% Gravity::swapTimeLevels() 10 6.468e-06 9.964e-06 1.138e-05 0.00% Amr::initSubcycle() 1 8.663e-06 9.378e-06 1.019e-05 0.00% Castro::computeNewDt() 9 7.804e-06 8.456e-06 9.365e-06 0.00% Castro::FluxRegCrseInit 10 7.698e-06 8.23e-06 9.006e-06 0.00% Castro::retry_advance_ctu() 10 5.347e-06 5.901e-06 6.705e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.741e-06 5.321e-06 6.312e-06 0.00% Castro::computeInitialDt() 2 3.403e-06 4.097e-06 5.461e-06 0.00% Amr::InitializeInit() 1 1.838e-06 2.59e-06 5.149e-06 0.00% Castro::post_regrid() 1 2.126e-06 3.424e-06 4.561e-06 0.00% Amr::init() 1 2.006e-06 2.332e-06 2.899e-06 0.00% Castro::FluxRegFineAdd() 10 1.765e-06 2.354e-06 2.814e-06 0.00% Amr::initialInit() 1 1.308e-06 1.51e-06 1.839e-06 0.00% DistributionMapping::Distribute() 1 9.47e-07 1.069e-06 1.173e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.539 3.54 3.541 100.00% Amr::coarseTimeStep() 10 3.342 3.342 3.342 94.39% Amr::timeStep() 10 3.33 3.331 3.332 94.09% Castro::advance() 10 3.314 3.314 3.315 93.62% Castro::subcycle_advance_ctu() 10 3.226 3.236 3.243 91.57% Castro::do_advance_ctu() 10 3.226 3.236 3.242 91.57% Castro::construct_ctu_hydro_source() 10 2.308 2.357 2.422 68.40% Gravity::make_radial_gravity() 21 0.338 0.3457 0.3565 10.07% Gravity::get_new_grav_vector() 11 0.2264 0.2288 0.23 6.49% Castro::construct_old_gravity() 10 0.2 0.2047 0.2125 6.00% Gravity::get_old_grav_vector() 10 0.1989 0.2038 0.2119 5.98% Castro::construct_new_gravity() 10 0.2007 0.2025 0.203 5.73% FillPatchIterator::Initialize 41 0.1645 0.1803 0.1958 5.53% Amr::init() 1 0.1808 0.1809 0.1809 5.11% Castro::initialize_do_advance() 10 0.1621 0.1713 0.1805 5.10% Amr::initialInit() 1 0.165 0.1653 0.1655 4.67% FillPatchSingleLevel 41 0.1146 0.1344 0.1598 4.51% Amr::InitializeInit() 1 0.05989 0.09887 0.1354 3.82% Amr::defBaseLevel() 1 0.05988 0.09886 0.1354 3.82% Castro::expand_state() 10 0.1108 0.123 0.1333 3.76% FabArray::ParallelCopy() 41 0.07686 0.09714 0.122 3.44% Castro::clean_state() 62 0.1144 0.1174 0.1212 3.42% Castro::initData() 1 0.04255 0.08109 0.1172 3.31% Castro::estTimeStep() 21 0.02107 0.0696 0.1167 3.29% Amr::FinalizeInit() 1 0.02994 0.06645 0.1056 2.98% FabArray::setVal() 143 0.06463 0.0731 0.0858 2.42% FabArray::ParallelCopy_finish() 41 0.03444 0.05521 0.085 2.40% Castro::initialize_advance() 10 0.06813 0.07487 0.08439 2.38% amrex::Copy() 193 0.06105 0.07456 0.08272 2.34% Castro::do_new_sources() 10 0.06075 0.06868 0.08039 2.27% Castro::computeInitialDt() 2 0.00204 0.03854 0.07755 2.19% Castro::computeTemp() 63 0.06789 0.06979 0.07245 2.05% Castro::reset_internal_energy(MultiFab) 63 0.0485 0.04992 0.0517 1.46% Castro::reset_internal_energy(Fab) 1008 0.04821 0.04963 0.0514 1.45% Castro::do_old_sources() 10 0.0405 0.04546 0.04678 1.32% Castro::normalize_species() 62 0.04128 0.04237 0.04367 1.23% FabArray::ParallelCopy_nowait() 41 0.03689 0.04185 0.04313 1.22% Castro::construct_new_source() 50 0.02994 0.03359 0.03921 1.11% StateDataPhysBCFunct::() 41 0.03459 0.0372 0.03886 1.10% StateData::FillBoundary(geom) 41 0.0345 0.0371 0.03876 1.09% Castro::construct_new_gravity_source() 10 0.02369 0.02729 0.03266 0.92% Gravity::interpolate_monopole_grav() 21 0.02826 0.02912 0.03109 0.88% Castro::post_init() 1 0.02701 0.02737 0.02757 0.78% Amr::writePlotFile() 2 0.0262 0.02635 0.0267 0.75% VisMF::Write(FabArray) 2 0.01354 0.01442 0.01701 0.48% Castro::post_timestep() 10 0.01592 0.01613 0.01636 0.46% Castro::apply_source_to_state() 20 0.01269 0.01441 0.01598 0.45% FabArray::Saxpy() 20 0.01266 0.01437 0.01594 0.45% Castro::Castro() 1 0.01147 0.01179 0.01226 0.35% FabArray::setDomainBndry() 41 0.007971 0.01073 0.01224 0.35% Castro::check_for_nan() 20 0.01013 0.01074 0.01171 0.33% MultiFab::contains_nan() 20 0.0101 0.01072 0.01169 0.33% Castro::construct_old_source() 50 0.007492 0.01053 0.01156 0.33% Castro::construct_old_gravity_source() 10 0.007447 0.01046 0.01148 0.32% Castro::computeNewDt() 9 0.008472 0.008478 0.008484 0.24% Castro::initMFs() 1 0.007022 0.007178 0.00756 0.21% Castro::enforce_min_density() 62 0.005653 0.006022 0.006359 0.18% AmrLevel::AmrLevel(dm) 1 0.005678 0.005852 0.006313 0.18% StateData::define() 4 0.005662 0.005829 0.006291 0.18% Castro::swap_state_time_levels() 10 0.003342 0.004358 0.004698 0.13% Castro::finalize_advance() 10 0.002984 0.003706 0.004412 0.12% Castro::buildMetrics() 1 0.001716 0.001762 0.001891 0.05% Castro::finalize_do_advance() 10 0.0006476 0.001458 0.001736 0.05% Castro::post_regrid() 1 0.001569 0.001607 0.001648 0.05% Amr::InitAmr() 1 0.00027 0.0002981 0.000404 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.189e-05 0.0001158 0.0001358 0.00% DistributionMapping::LeastUsedCPUs() 1 7.202e-06 0.0001094 0.0001285 0.00% Castro::enforce_consistent_e() 1 7.354e-05 8.58e-05 9.466e-05 0.00% FabArrayBase::getCPC() 41 6.464e-05 7.327e-05 8.854e-05 0.00% Amr::writeSmallPlotFile() 1 3.334e-05 5.756e-05 7.754e-05 0.00% FabArrayBase::CPC::define() 2 2.139e-05 2.469e-05 3.074e-05 0.00% Castro::enforce_speed_limit() 62 2.425e-05 2.691e-05 3.006e-05 0.00% Castro::create_source_corrector() 10 6.602e-06 9.753e-06 1.512e-05 0.00% Gravity::set_mass_offset() 10 8.807e-06 9.609e-06 1.149e-05 0.00% Gravity::swapTimeLevels() 10 6.468e-06 9.964e-06 1.138e-05 0.00% Amr::initSubcycle() 1 8.663e-06 9.378e-06 1.019e-05 0.00% Castro::FluxRegCrseInit 10 7.698e-06 8.23e-06 9.006e-06 0.00% Castro::retry_advance_ctu() 10 5.347e-06 5.901e-06 6.705e-06 0.00% Castro::FluxRegFineAdd() 10 1.765e-06 2.354e-06 2.814e-06 0.00% DistributionMapping::Distribute() 1 9.47e-07 1.069e-06 1.173e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (23.01-23-ge472c108e721) finalized