MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.01-29-g225c605680e8) initialized Starting run at 21:15:09 UTC on 2023-01-30. Successfully read inputs file ... Castro git describe: 23.01-27-g0a1988c98 AMReX git describe: 23.01-29-g225c60568 Microphysics git describe: 23.01-7-g5e1d020c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.018097369 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.463367227 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.378904792 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.327733956 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.331024608 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.362550987 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.323529171 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.314281516 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.314971347 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.315232783 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.315660876 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010769831 seconds Ending run at 21:15:12 UTC on 2023-01-30. Run time = 3.713642888 Run time without initialization = 3.465063314 Average number of zones advanced per microsecond: 0.757 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.713 ... 3.713 ... 3.714 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.3006 2.3728 2.4275 65.37% Gravity::make_radial_gravity() 21 0.3494 0.3597 0.3695 9.95% Castro::do_advance_ctu() 10 0.1004 0.1579 0.2295 6.18% Castro::estTimeStep() 21 0.04039 0.1116 0.1675 4.51% Castro::initData() 1 0.03999 0.08722 0.158 4.26% amrex::Copy() 193 0.06385 0.07084 0.07627 2.05% FabArray::setVal() 143 0.06348 0.06704 0.07184 1.93% FabArray::ParallelCopy_finish() 41 0.03768 0.04903 0.06163 1.66% Castro::reset_internal_energy(Fab) 1008 0.04822 0.05027 0.05415 1.46% Castro::normalize_species() 62 0.04135 0.04277 0.04614 1.24% FabArray::ParallelCopy_nowait() 41 0.0376 0.04115 0.04308 1.16% StateData::FillBoundary(geom) 41 0.03482 0.03833 0.04075 1.10% FillPatchIterator::Initialize 41 0.02961 0.03367 0.03716 1.00% Castro::construct_new_gravity_source() 10 0.0232 0.02669 0.03298 0.89% Gravity::interpolate_monopole_grav() 21 0.02822 0.02889 0.03055 0.82% Castro::computeTemp() 63 0.01776 0.02013 0.02201 0.59% Castro::initialize_do_advance() 10 0.01297 0.01738 0.01933 0.52% VisMF::Write(FabArray) 2 0.01354 0.01489 0.01931 0.52% FabArray::Saxpy() 20 0.01341 0.01423 0.01493 0.40% Castro::initialize_advance() 10 0.009701 0.01216 0.01492 0.40% Amr::writePlotFile() 2 0.007139 0.01182 0.01388 0.37% MultiFab::contains_nan() 20 0.00994 0.01139 0.01215 0.33% FabArray::setDomainBndry() 41 0.008155 0.01018 0.01158 0.31% Castro::construct_old_gravity_source() 10 0.007495 0.01016 0.01059 0.29% Castro::initMFs() 1 0.006837 0.007927 0.0104 0.28% StateData::define() 4 0.005665 0.006471 0.008282 0.22% Castro::construct_new_source() 50 0.006014 0.006316 0.006816 0.18% Castro::enforce_min_density() 62 0.005922 0.0062 0.006744 0.18% Castro::swap_state_time_levels() 10 0.003472 0.005117 0.006504 0.18% main() 1 0.005434 0.005973 0.006297 0.17% Gravity::get_new_grav_vector() 11 0.003125 0.003706 0.004346 0.12% Amr::coarseTimeStep() 10 0.001667 0.00239 0.003004 0.08% Gravity::get_old_grav_vector() 10 0.001792 0.002266 0.002612 0.07% Castro::buildMetrics() 1 0.001623 0.001847 0.002373 0.06% Castro::finalize_do_advance() 10 0.0007724 0.001514 0.001724 0.05% Castro::expand_state() 10 0.0006888 0.0008421 0.001331 0.04% Amr::timeStep() 10 0.0001966 0.0002687 0.0005242 0.01% Amr::InitAmr() 1 0.0002583 0.0003393 0.0004812 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000291 0.0003103 0.000353 0.01% DistributionMapping::LeastUsedCPUs() 1 5.944e-06 0.0001766 0.0002532 0.01% Castro::clean_state() 62 0.0001386 0.0001594 0.0001734 0.00% Castro::enforce_consistent_e() 1 8.481e-05 9.858e-05 0.0001449 0.00% StateDataPhysBCFunct::() 41 9.844e-05 0.0001118 0.0001378 0.00% Castro::finalize_advance() 10 8.48e-05 0.0001014 0.0001188 0.00% FabArray::ParallelCopy() 41 6.745e-05 7.712e-05 9.919e-05 0.00% Castro::Castro() 1 5.905e-05 7.427e-05 9.131e-05 0.00% Castro::construct_old_source() 50 5.026e-05 6.739e-05 7.695e-05 0.00% Amr::writeSmallPlotFile() 1 3.231e-05 6.092e-05 7.503e-05 0.00% FillPatchSingleLevel 41 6.276e-05 6.77e-05 7.29e-05 0.00% Amr::FinalizeInit() 1 4.02e-06 1.323e-05 7.215e-05 0.00% Castro::advance() 10 3.912e-05 4.489e-05 6.985e-05 0.00% FabArrayBase::getCPC() 41 4.003e-05 5.724e-05 6.821e-05 0.00% Castro::do_new_sources() 10 5.301e-05 6.178e-05 6.777e-05 0.00% Castro::do_old_sources() 10 4.717e-05 5.742e-05 6.665e-05 0.00% Castro::apply_source_to_state() 20 4.196e-05 5.115e-05 6.331e-05 0.00% Castro::subcycle_advance_ctu() 10 4.061e-05 4.855e-05 5.602e-05 0.00% Castro::construct_new_gravity() 10 3.292e-05 4.12e-05 5.483e-05 0.00% Castro::construct_old_gravity() 10 3.612e-05 4.267e-05 4.965e-05 0.00% FabArrayBase::CPC::define() 2 2.204e-05 2.778e-05 3.704e-05 0.00% Castro::enforce_speed_limit() 62 2.665e-05 3.095e-05 3.446e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.578e-05 2.666e-05 3.269e-05 0.00% Amr::defBaseLevel() 1 1.695e-05 2.227e-05 2.734e-05 0.00% Castro::check_for_nan() 20 1.774e-05 2.267e-05 2.566e-05 0.00% Gravity::set_mass_offset() 10 7.701e-06 1.143e-05 1.947e-05 0.00% Castro::post_timestep() 10 1.621e-05 1.799e-05 1.909e-05 0.00% Gravity::swapTimeLevels() 10 8.989e-06 1.211e-05 1.784e-05 0.00% Amr::initSubcycle() 1 8.636e-06 1.095e-05 1.619e-05 0.00% Castro::create_source_corrector() 10 7.843e-06 9.958e-06 1.159e-05 0.00% Castro::FluxRegCrseInit 10 6.99e-06 9.274e-06 1.115e-05 0.00% Castro::computeNewDt() 9 7.662e-06 8.902e-06 1.034e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.671e-06 5.625e-06 7.665e-06 0.00% Amr::init() 1 1.98e-06 2.916e-06 7.352e-06 0.00% Amr::InitializeInit() 1 2.011e-06 3.331e-06 7.228e-06 0.00% Castro::retry_advance_ctu() 10 4.711e-06 5.789e-06 6.705e-06 0.00% Castro::computeInitialDt() 2 3.644e-06 4.391e-06 6.075e-06 0.00% Castro::post_init() 1 3.098e-06 3.885e-06 4.222e-06 0.00% Castro::post_regrid() 1 2.089e-06 3.043e-06 4.106e-06 0.00% Castro::FluxRegFineAdd() 10 2.084e-06 2.365e-06 2.932e-06 0.00% Amr::initialInit() 1 1.245e-06 1.387e-06 1.54e-06 0.00% DistributionMapping::Distribute() 1 8.42e-07 1.202e-06 1.322e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.713 3.713 3.714 100.00% Amr::coarseTimeStep() 10 3.448 3.448 3.448 92.85% Amr::timeStep() 10 3.434 3.435 3.436 92.52% Castro::advance() 10 3.418 3.419 3.419 92.06% Castro::subcycle_advance_ctu() 10 3.336 3.341 3.346 90.10% Castro::do_advance_ctu() 10 3.336 3.341 3.346 90.10% Castro::construct_ctu_hydro_source() 10 2.301 2.373 2.428 65.37% Gravity::make_radial_gravity() 21 0.3643 0.3761 0.3874 10.43% Amr::init() 1 0.2479 0.2481 0.2481 6.68% Gravity::get_new_grav_vector() 11 0.2411 0.2428 0.2446 6.59% Amr::initialInit() 1 0.2287 0.2296 0.2302 6.20% Castro::construct_old_gravity() 10 0.2091 0.2189 0.2277 6.13% Gravity::get_old_grav_vector() 10 0.2084 0.2182 0.227 6.11% Castro::construct_new_gravity() 10 0.2025 0.204 0.2048 5.51% Amr::InitializeInit() 1 0.06053 0.11 0.1861 5.01% Amr::defBaseLevel() 1 0.06052 0.11 0.1861 5.01% FillPatchIterator::Initialize 41 0.1611 0.1727 0.1763 4.75% Castro::initialize_do_advance() 10 0.1547 0.1632 0.1727 4.65% Amr::FinalizeInit() 1 0.0438 0.1196 0.1692 4.56% Castro::estTimeStep() 21 0.04039 0.1116 0.1675 4.51% Castro::initData() 1 0.04386 0.09141 0.1631 4.39% FillPatchSingleLevel 41 0.1198 0.1289 0.1381 3.72% Castro::computeInitialDt() 2 0.003215 0.07954 0.1289 3.47% Castro::clean_state() 62 0.1132 0.1188 0.128 3.45% Castro::expand_state() 10 0.1103 0.115 0.1216 3.27% FabArray::ParallelCopy() 41 0.0792 0.09035 0.09939 2.68% Castro::initialize_advance() 10 0.06939 0.07383 0.07983 2.15% Castro::do_new_sources() 10 0.05929 0.06586 0.07709 2.08% Castro::computeTemp() 63 0.06627 0.07071 0.07651 2.06% amrex::Copy() 193 0.06385 0.07084 0.07627 2.05% FabArray::setVal() 143 0.06348 0.06704 0.07184 1.93% FabArray::ParallelCopy_finish() 41 0.03768 0.04903 0.06163 1.66% Castro::reset_internal_energy(MultiFab) 63 0.04851 0.05058 0.0545 1.47% Castro::reset_internal_energy(Fab) 1008 0.04822 0.05027 0.05415 1.46% Castro::do_old_sources() 10 0.04216 0.04561 0.04833 1.30% Castro::normalize_species() 62 0.04135 0.04277 0.04614 1.24% FabArray::ParallelCopy_nowait() 41 0.03769 0.04124 0.04317 1.16% StateDataPhysBCFunct::() 41 0.03492 0.03844 0.04087 1.10% StateData::FillBoundary(geom) 41 0.03482 0.03833 0.04075 1.10% Castro::post_init() 1 0.03921 0.03984 0.04049 1.09% Castro::construct_new_source() 50 0.0294 0.03301 0.0398 1.07% Castro::construct_new_gravity_source() 10 0.0232 0.02669 0.03298 0.89% Gravity::interpolate_monopole_grav() 21 0.02822 0.02889 0.03055 0.82% Amr::writePlotFile() 2 0.02858 0.02931 0.03023 0.81% VisMF::Write(FabArray) 2 0.01354 0.01489 0.01931 0.52% Castro::post_timestep() 10 0.01568 0.01618 0.01678 0.45% Castro::apply_source_to_state() 20 0.01347 0.01428 0.01499 0.40% FabArray::Saxpy() 20 0.01341 0.01423 0.01493 0.40% Castro::Castro() 1 0.01069 0.01185 0.01462 0.39% Castro::check_for_nan() 20 0.009962 0.01141 0.01217 0.33% MultiFab::contains_nan() 20 0.00994 0.01139 0.01215 0.33% FabArray::setDomainBndry() 41 0.008155 0.01018 0.01158 0.31% Castro::construct_old_source() 50 0.007545 0.01023 0.01066 0.29% Castro::construct_old_gravity_source() 10 0.007495 0.01016 0.01059 0.29% Castro::initMFs() 1 0.006837 0.007927 0.0104 0.28% Castro::computeNewDt() 9 0.008975 0.00898 0.008991 0.24% AmrLevel::AmrLevel(dm) 1 0.005695 0.006498 0.008314 0.22% StateData::define() 4 0.005665 0.006471 0.008282 0.22% Castro::enforce_min_density() 62 0.005922 0.0062 0.006744 0.18% Castro::swap_state_time_levels() 10 0.003472 0.005117 0.006504 0.18% Castro::finalize_advance() 10 0.003149 0.003274 0.003454 0.09% Castro::post_regrid() 1 0.001531 0.001924 0.002896 0.08% Castro::buildMetrics() 1 0.001739 0.001996 0.002606 0.07% Castro::finalize_do_advance() 10 0.0007724 0.001514 0.001724 0.05% Amr::InitAmr() 1 0.0002679 0.0003503 0.000497 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.487e-05 0.0001835 0.0002602 0.01% DistributionMapping::LeastUsedCPUs() 1 5.944e-06 0.0001766 0.0002532 0.01% Castro::enforce_consistent_e() 1 8.481e-05 9.858e-05 0.0001449 0.00% FabArrayBase::getCPC() 41 6.429e-05 8.502e-05 0.0001027 0.00% Amr::writeSmallPlotFile() 1 3.231e-05 6.092e-05 7.503e-05 0.00% FabArrayBase::CPC::define() 2 2.204e-05 2.778e-05 3.704e-05 0.00% Castro::enforce_speed_limit() 62 2.665e-05 3.095e-05 3.446e-05 0.00% Gravity::set_mass_offset() 10 7.701e-06 1.143e-05 1.947e-05 0.00% Gravity::swapTimeLevels() 10 8.989e-06 1.211e-05 1.784e-05 0.00% Amr::initSubcycle() 1 8.636e-06 1.095e-05 1.619e-05 0.00% Castro::create_source_corrector() 10 7.843e-06 9.958e-06 1.159e-05 0.00% Castro::FluxRegCrseInit 10 6.99e-06 9.274e-06 1.115e-05 0.00% Castro::retry_advance_ctu() 10 4.711e-06 5.789e-06 6.705e-06 0.00% Castro::FluxRegFineAdd() 10 2.084e-06 2.365e-06 2.932e-06 0.00% DistributionMapping::Distribute() 1 8.42e-07 1.202e-06 1.322e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (23.01-29-g225c605680e8) finalized