MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.02-4-ge6e2fbc3cd75) initialized Starting run at 06:47:05 UTC on 2023-02-02. Successfully read inputs file ... Castro git describe: 23.01-27-g39382f3e8 AMReX git describe: 23.02-4-ge6e2fbc3c Microphysics git describe: 23.02-1-g816070c2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015698383 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.365809538 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.360437997 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.350149574 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.336679212 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.364736148 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.330888779 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.313254415 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.314371185 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.314439937 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.313594965 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010023549 seconds Ending run at 06:47:09 UTC on 2023-02-02. Run time = 3.588996552 Run time without initialization = 3.381455875 Average number of zones advanced per microsecond: 0.775 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.588 ... 3.589 ... 3.589 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2467 2.3865 2.4400 67.98% Gravity::make_radial_gravity() 21 0.3214 0.3312 0.3557 9.91% Castro::do_advance_ctu() 10 0.02345 0.07908 0.2239 6.24% Castro::initData() 1 0.04011 0.08018 0.1347 3.75% Castro::estTimeStep() 21 0.02581 0.08853 0.133 3.71% FabArray::ParallelCopy_finish() 41 0.03493 0.04897 0.09171 2.56% amrex::Copy() 193 0.05748 0.07581 0.08326 2.32% FabArray::setVal() 143 0.05659 0.06546 0.07439 2.07% Castro::reset_internal_energy(Fab) 1008 0.04875 0.05011 0.05198 1.45% FabArray::ParallelCopy_nowait() 41 0.03582 0.04292 0.04469 1.25% Castro::normalize_species() 62 0.04043 0.04181 0.04259 1.19% StateData::FillBoundary(geom) 41 0.03499 0.03797 0.04144 1.15% FillPatchIterator::Initialize 41 0.02786 0.03579 0.03796 1.06% Gravity::interpolate_monopole_grav() 21 0.02788 0.02869 0.02916 0.81% Castro::construct_new_gravity_source() 10 0.02366 0.02592 0.02916 0.81% Castro::computeTemp() 63 0.01957 0.02021 0.02129 0.59% Castro::initialize_do_advance() 10 0.01165 0.01785 0.01948 0.54% VisMF::Write(FabArray) 2 0.01331 0.01406 0.01697 0.47% FabArray::Saxpy() 20 0.01158 0.01364 0.01471 0.41% Castro::initialize_advance() 10 0.004076 0.009618 0.01311 0.37% FabArray::setDomainBndry() 41 0.007312 0.01119 0.01243 0.35% MultiFab::contains_nan() 20 0.00998 0.01064 0.01154 0.32% Castro::construct_old_gravity_source() 10 0.007072 0.01024 0.01108 0.31% Amr::writePlotFile() 2 0.006242 0.009524 0.01097 0.31% StateData::define() 4 0.005684 0.007208 0.00872 0.24% Castro::initMFs() 1 0.006752 0.007176 0.007915 0.22% main() 1 0.004947 0.005858 0.006465 0.18% Castro::construct_new_source() 50 0.005592 0.006198 0.006395 0.18% Castro::enforce_min_density() 62 0.005521 0.006025 0.006244 0.17% Castro::swap_state_time_levels() 10 0.003322 0.004435 0.005301 0.15% Gravity::get_new_grav_vector() 11 0.0029 0.003886 0.004335 0.12% Gravity::get_old_grav_vector() 10 0.001823 0.002741 0.003037 0.08% Amr::coarseTimeStep() 10 0.001529 0.002094 0.002979 0.08% Castro::buildMetrics() 1 0.001579 0.001833 0.00281 0.08% Castro::finalize_do_advance() 10 0.0005938 0.001624 0.002024 0.06% Castro::expand_state() 10 0.0006313 0.0007617 0.0008385 0.02% Amr::InitAmr() 1 0.0002785 0.0004252 0.000652 0.02% DistributionMapping::LeastUsedCPUs() 1 7.471e-06 0.0002789 0.0004514 0.01% Amr::timeStep() 10 0.0001611 0.0002338 0.0004455 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002814 0.0003024 0.0003272 0.01% Castro::clean_state() 62 0.0001453 0.0001572 0.0001702 0.00% StateDataPhysBCFunct::() 41 9.851e-05 0.0001085 0.0001443 0.00% Castro::enforce_consistent_e() 1 8.32e-05 9.583e-05 0.0001347 0.00% Castro::finalize_advance() 10 8.136e-05 9.17e-05 0.0001048 0.00% FabArrayBase::getCPC() 41 4.166e-05 6.236e-05 9.697e-05 0.00% Castro::construct_old_source() 50 4.664e-05 7.009e-05 9.07e-05 0.00% FabArray::ParallelCopy() 41 7.08e-05 7.874e-05 8.698e-05 0.00% Castro::do_old_sources() 10 5.128e-05 6.409e-05 8.249e-05 0.00% FillPatchSingleLevel 41 5.929e-05 6.907e-05 8.194e-05 0.00% Castro::Castro() 1 5.374e-05 6.428e-05 7.998e-05 0.00% Amr::writeSmallPlotFile() 1 2.606e-05 6.42e-05 7.961e-05 0.00% Castro::do_new_sources() 10 5.127e-05 6.144e-05 6.951e-05 0.00% Amr::FinalizeInit() 1 4.354e-06 1.243e-05 6.656e-05 0.00% Castro::construct_old_gravity() 10 3.798e-05 4.418e-05 5.348e-05 0.00% Castro::subcycle_advance_ctu() 10 3.684e-05 4.506e-05 5.086e-05 0.00% Castro::construct_new_gravity() 10 3.402e-05 3.972e-05 4.942e-05 0.00% Castro::apply_source_to_state() 20 4.082e-05 4.552e-05 4.877e-05 0.00% Castro::advance() 10 3.489e-05 3.842e-05 4.354e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.979e-05 3.48e-05 4.354e-05 0.00% Castro::enforce_speed_limit() 62 2.602e-05 2.999e-05 4.163e-05 0.00% FabArrayBase::CPC::define() 2 2.103e-05 2.452e-05 3.127e-05 0.00% Castro::check_for_nan() 20 1.973e-05 2.26e-05 2.525e-05 0.00% Amr::defBaseLevel() 1 1.703e-05 1.971e-05 2.26e-05 0.00% Castro::post_timestep() 10 1.628e-05 1.814e-05 2e-05 0.00% Amr::initSubcycle() 1 9.128e-06 1.255e-05 1.575e-05 0.00% Gravity::swapTimeLevels() 10 6.002e-06 1.079e-05 1.194e-05 0.00% Castro::create_source_corrector() 10 7.975e-06 9.81e-06 1.154e-05 0.00% Gravity::set_mass_offset() 10 9.806e-06 1.055e-05 1.129e-05 0.00% Castro::computeNewDt() 9 8.034e-06 9.108e-06 1.004e-05 0.00% Castro::FluxRegCrseInit 10 7.466e-06 8.635e-06 9.933e-06 0.00% Amr::initialInit() 1 1.054e-06 2.262e-06 7.848e-06 0.00% Amr::InitializeInit() 1 2.252e-06 3.214e-06 6.959e-06 0.00% Amr::init() 1 1.859e-06 2.947e-06 6.945e-06 0.00% Castro::retry_advance_ctu() 10 5.21e-06 5.823e-06 6.21e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.768e-06 4.475e-06 4.974e-06 0.00% Castro::post_init() 1 2.66e-06 3.765e-06 4.481e-06 0.00% Castro::computeInitialDt() 2 3.11e-06 3.702e-06 4.249e-06 0.00% Castro::post_regrid() 1 2.461e-06 2.971e-06 3.6e-06 0.00% Castro::FluxRegFineAdd() 10 1.831e-06 2.215e-06 2.588e-06 0.00% DistributionMapping::Distribute() 1 9.8e-07 1.175e-06 1.368e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.588 3.589 3.589 100.00% Amr::coarseTimeStep() 10 3.365 3.365 3.365 93.76% Amr::timeStep() 10 3.352 3.353 3.354 93.44% Castro::advance() 10 3.336 3.337 3.338 93.00% Castro::subcycle_advance_ctu() 10 3.258 3.265 3.278 91.32% Castro::do_advance_ctu() 10 3.258 3.265 3.278 91.32% Castro::construct_ctu_hydro_source() 10 2.247 2.387 2.44 67.98% Gravity::make_radial_gravity() 21 0.3393 0.3493 0.3683 10.26% Gravity::get_new_grav_vector() 11 0.2276 0.2292 0.2305 6.42% Castro::construct_old_gravity() 10 0.1981 0.2059 0.2204 6.14% Gravity::get_old_grav_vector() 10 0.1973 0.2051 0.2197 6.12% Amr::init() 1 0.2067 0.2069 0.2071 5.77% Castro::construct_new_gravity() 10 0.2009 0.202 0.203 5.66% FillPatchIterator::Initialize 41 0.1677 0.1772 0.1981 5.52% Amr::initialInit() 1 0.1907 0.1909 0.1911 5.32% Castro::initialize_do_advance() 10 0.1639 0.1689 0.1738 4.84% FillPatchSingleLevel 41 0.1185 0.1302 0.163 4.54% Amr::InitializeInit() 1 0.06253 0.1025 0.1598 4.45% Amr::defBaseLevel() 1 0.06252 0.1025 0.1598 4.45% Castro::initData() 1 0.04398 0.08418 0.1388 3.87% Castro::estTimeStep() 21 0.02581 0.08853 0.133 3.71% Amr::FinalizeInit() 1 0.03134 0.08838 0.1283 3.58% FabArray::ParallelCopy() 41 0.07938 0.09206 0.1277 3.56% Castro::expand_state() 10 0.1137 0.1206 0.1272 3.54% Castro::clean_state() 62 0.1135 0.1176 0.1209 3.37% Castro::computeInitialDt() 2 0.002366 0.05973 0.09958 2.77% FabArray::ParallelCopy_finish() 41 0.03493 0.04897 0.09171 2.56% amrex::Copy() 193 0.05748 0.07581 0.08326 2.32% Castro::initialize_advance() 10 0.05491 0.06817 0.07544 2.10% FabArray::setVal() 143 0.05659 0.06546 0.07439 2.07% Castro::do_new_sources() 10 0.06115 0.06555 0.07396 2.06% Castro::computeTemp() 63 0.06865 0.07063 0.07358 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04907 0.05041 0.05229 1.46% Castro::reset_internal_energy(Fab) 1008 0.04875 0.05011 0.05198 1.45% Castro::do_old_sources() 10 0.0387 0.04509 0.04622 1.29% FabArray::ParallelCopy_nowait() 41 0.03595 0.043 0.04477 1.25% Castro::normalize_species() 62 0.04043 0.04181 0.04259 1.19% StateDataPhysBCFunct::() 41 0.03513 0.03807 0.04156 1.16% StateData::FillBoundary(geom) 41 0.03499 0.03797 0.04144 1.15% Castro::construct_new_source() 50 0.02992 0.03212 0.03555 0.99% Gravity::interpolate_monopole_grav() 21 0.02788 0.02869 0.02916 0.81% Castro::construct_new_gravity_source() 10 0.02366 0.02592 0.02916 0.81% Castro::post_init() 1 0.02799 0.02823 0.02837 0.79% Amr::writePlotFile() 2 0.0258 0.02612 0.02656 0.74% VisMF::Write(FabArray) 2 0.01331 0.01406 0.01697 0.47% Castro::post_timestep() 10 0.0157 0.01592 0.01648 0.46% Castro::apply_source_to_state() 20 0.01163 0.01369 0.01475 0.41% FabArray::Saxpy() 20 0.01158 0.01364 0.01471 0.41% FabArray::setDomainBndry() 41 0.007312 0.01119 0.01243 0.35% Castro::Castro() 1 0.009882 0.01081 0.012 0.33% Castro::check_for_nan() 20 0.01001 0.01066 0.01156 0.32% MultiFab::contains_nan() 20 0.00998 0.01064 0.01154 0.32% Castro::construct_old_source() 50 0.007119 0.01031 0.01115 0.31% Castro::construct_old_gravity_source() 10 0.007072 0.01024 0.01108 0.31% AmrLevel::AmrLevel(dm) 1 0.005713 0.007243 0.008758 0.24% StateData::define() 4 0.005684 0.007208 0.00872 0.24% Castro::computeNewDt() 9 0.008595 0.008615 0.008633 0.24% Castro::initMFs() 1 0.006752 0.007176 0.007915 0.22% Castro::enforce_min_density() 62 0.005521 0.006025 0.006244 0.17% Castro::swap_state_time_levels() 10 0.003322 0.004435 0.005301 0.15% Castro::finalize_advance() 10 0.002932 0.003337 0.003876 0.11% Castro::buildMetrics() 1 0.001697 0.001967 0.002993 0.08% Castro::finalize_do_advance() 10 0.0005938 0.001624 0.002024 0.06% Castro::post_regrid() 1 0.001429 0.001627 0.001912 0.05% Amr::InitAmr() 1 0.0002882 0.0004378 0.0006668 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.25e-05 0.0002845 0.0004576 0.01% DistributionMapping::LeastUsedCPUs() 1 7.471e-06 0.0002789 0.0004514 0.01% Castro::enforce_consistent_e() 1 8.32e-05 9.583e-05 0.0001347 0.00% FabArrayBase::getCPC() 41 6.302e-05 8.689e-05 0.000128 0.00% Amr::writeSmallPlotFile() 1 2.606e-05 6.42e-05 7.961e-05 0.00% Castro::enforce_speed_limit() 62 2.602e-05 2.999e-05 4.163e-05 0.00% FabArrayBase::CPC::define() 2 2.103e-05 2.452e-05 3.127e-05 0.00% Amr::initSubcycle() 1 9.128e-06 1.255e-05 1.575e-05 0.00% Gravity::swapTimeLevels() 10 6.002e-06 1.079e-05 1.194e-05 0.00% Castro::create_source_corrector() 10 7.975e-06 9.81e-06 1.154e-05 0.00% Gravity::set_mass_offset() 10 9.806e-06 1.055e-05 1.129e-05 0.00% Castro::FluxRegCrseInit 10 7.466e-06 8.635e-06 9.933e-06 0.00% Castro::retry_advance_ctu() 10 5.21e-06 5.823e-06 6.21e-06 0.00% Castro::FluxRegFineAdd() 10 1.831e-06 2.215e-06 2.588e-06 0.00% DistributionMapping::Distribute() 1 9.8e-07 1.175e-06 1.368e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (23.02-4-ge6e2fbc3cd75) finalized