MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.02) initialized Starting run at 18:39:02 UTC on 2023-02-08. Successfully read inputs file ... Castro git describe: 23.01-29-g17383eda5 AMReX git describe: 23.02 Microphysics git describe: 23.02-5-gcc58fec0 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015448656 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358971968 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.391707854 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.364701173 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.332795099 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.362641767 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.328312881 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.310124257 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.312176151 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.313178234 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.310934093 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.045686199 seconds Ending run at 18:39:05 UTC on 2023-02-08. Run time = 3.640587282 Run time without initialization = 3.438392011 Average number of zones advanced per microsecond: 0.762 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.64 ... 3.64 ... 3.641 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2648 2.3613 2.4568 67.48% Gravity::make_radial_gravity() 21 0.3211 0.3336 0.3496 9.60% Castro::do_advance_ctu() 10 0.03156 0.1284 0.2277 6.25% Castro::initData() 1 0.03848 0.07947 0.1339 3.68% Castro::estTimeStep() 21 0.03414 0.08618 0.1324 3.64% amrex::Copy() 193 0.06165 0.07338 0.08301 2.28% FabArray::setVal() 143 0.0622 0.06875 0.07786 2.14% FabArray::ParallelCopy_finish() 41 0.03242 0.04886 0.07349 2.02% Castro::reset_internal_energy(Fab) 1008 0.04812 0.0498 0.05146 1.41% Amr::writePlotFile() 2 0.04199 0.04474 0.04557 1.25% FabArray::ParallelCopy_nowait() 41 0.03651 0.04152 0.04326 1.19% Castro::normalize_species() 62 0.0413 0.04185 0.04267 1.17% StateData::FillBoundary(geom) 41 0.03276 0.03611 0.03898 1.07% FillPatchIterator::Initialize 41 0.02838 0.03425 0.03632 1.00% Castro::construct_new_gravity_source() 10 0.02342 0.02566 0.02937 0.81% Gravity::interpolate_monopole_grav() 21 0.02839 0.02862 0.02922 0.80% Castro::computeTemp() 63 0.01942 0.01974 0.02001 0.55% Castro::initialize_do_advance() 10 0.01175 0.01698 0.01819 0.50% VisMF::Write(FabArray) 2 0.01347 0.01398 0.01656 0.45% FabArray::Saxpy() 20 0.01232 0.01398 0.01465 0.40% Castro::initialize_advance() 10 0.008179 0.01101 0.01404 0.39% MultiFab::contains_nan() 20 0.009949 0.01079 0.0118 0.32% FabArray::setDomainBndry() 41 0.007862 0.01056 0.01178 0.32% Castro::construct_old_gravity_source() 10 0.007692 0.01016 0.01075 0.30% Castro::initMFs() 1 0.006899 0.007186 0.008996 0.25% StateData::define() 4 0.005655 0.005793 0.006548 0.18% main() 1 0.005362 0.005904 0.006422 0.18% Castro::construct_new_source() 50 0.005672 0.006131 0.006372 0.18% Castro::enforce_min_density() 62 0.005679 0.006018 0.006355 0.17% Castro::swap_state_time_levels() 10 0.003325 0.004374 0.004703 0.13% Gravity::get_new_grav_vector() 11 0.00314 0.00372 0.003997 0.11% Amr::coarseTimeStep() 10 0.001738 0.002536 0.003344 0.09% Gravity::get_old_grav_vector() 10 0.001846 0.002513 0.002924 0.08% Castro::buildMetrics() 1 0.001634 0.001672 0.001879 0.05% Castro::finalize_do_advance() 10 0.0006429 0.001364 0.001604 0.04% Castro::expand_state() 10 0.000611 0.0008618 0.001021 0.03% Amr::timeStep() 10 0.0001827 0.0002508 0.0004216 0.01% Amr::InitAmr() 1 0.0002642 0.0002982 0.0004012 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002825 0.000293 0.0003106 0.01% Castro::clean_state() 62 0.0001278 0.0001433 0.0001673 0.00% DistributionMapping::LeastUsedCPUs() 1 9.199e-06 0.0001132 0.0001391 0.00% Castro::Castro() 1 6.053e-05 7.639e-05 0.0001206 0.00% StateDataPhysBCFunct::() 41 9.399e-05 0.0001062 0.0001138 0.00% Castro::finalize_advance() 10 8.035e-05 9.25e-05 0.0001115 0.00% Castro::enforce_consistent_e() 1 7.699e-05 8.675e-05 9.281e-05 0.00% FabArray::ParallelCopy() 41 6.02e-05 7.057e-05 7.946e-05 0.00% Castro::construct_old_source() 50 5.453e-05 6.8e-05 7.724e-05 0.00% Amr::FinalizeInit() 1 3.767e-06 1.369e-05 7.668e-05 0.00% Amr::writeSmallPlotFile() 1 2.597e-05 5.604e-05 7.591e-05 0.00% Castro::do_new_sources() 10 5.367e-05 6.102e-05 7.065e-05 0.00% FillPatchSingleLevel 41 5.521e-05 6.217e-05 7.005e-05 0.00% Castro::do_old_sources() 10 5.149e-05 6.044e-05 6.826e-05 0.00% FabArrayBase::getCPC() 41 3.542e-05 4.918e-05 6.711e-05 0.00% Castro::apply_source_to_state() 20 4.095e-05 5.032e-05 6.412e-05 0.00% Castro::advance() 10 3.365e-05 4.35e-05 5.479e-05 0.00% Castro::construct_old_gravity() 10 3.388e-05 3.937e-05 5.029e-05 0.00% Castro::subcycle_advance_ctu() 10 3.651e-05 4.157e-05 4.728e-05 0.00% Castro::construct_new_gravity() 10 3.256e-05 3.853e-05 4.373e-05 0.00% Castro::enforce_speed_limit() 62 2.569e-05 3.067e-05 3.64e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.587e-05 2.506e-05 3.516e-05 0.00% FabArrayBase::CPC::define() 2 2.032e-05 2.287e-05 2.6e-05 0.00% Castro::check_for_nan() 20 2.06e-05 2.3e-05 2.433e-05 0.00% Amr::defBaseLevel() 1 1.746e-05 1.995e-05 2.232e-05 0.00% Castro::post_timestep() 10 1.356e-05 1.78e-05 2.142e-05 0.00% Castro::create_source_corrector() 10 7.654e-06 9.637e-06 1.198e-05 0.00% Gravity::swapTimeLevels() 10 8.751e-06 1.033e-05 1.168e-05 0.00% Gravity::set_mass_offset() 10 9.419e-06 1.022e-05 1.072e-05 0.00% Amr::initSubcycle() 1 8.692e-06 9.438e-06 1.052e-05 0.00% Castro::post_init() 1 3.425e-06 5.307e-06 1.028e-05 0.00% Castro::FluxRegCrseInit 10 5.986e-06 8.397e-06 1.014e-05 0.00% Castro::computeNewDt() 9 7.337e-06 8.127e-06 9.188e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.566e-06 5.648e-06 6.971e-06 0.00% Castro::retry_advance_ctu() 10 4.827e-06 5.65e-06 6.506e-06 0.00% Amr::InitializeInit() 1 2.058e-06 3.004e-06 5.294e-06 0.00% Castro::computeInitialDt() 2 3.607e-06 4.269e-06 5.178e-06 0.00% Castro::post_regrid() 1 2.472e-06 3.27e-06 4.47e-06 0.00% Amr::init() 1 1.926e-06 2.405e-06 3.098e-06 0.00% Amr::initialInit() 1 1.496e-06 1.782e-06 2.821e-06 0.00% Castro::FluxRegFineAdd() 10 1.823e-06 2.187e-06 2.377e-06 0.00% DistributionMapping::Distribute() 1 8.59e-07 1.041e-06 1.144e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.64 3.64 3.641 100.00% Amr::coarseTimeStep() 10 3.386 3.386 3.386 93.02% Amr::timeStep() 10 3.373 3.374 3.375 92.70% Castro::advance() 10 3.357 3.358 3.358 92.25% Castro::subcycle_advance_ctu() 10 3.276 3.282 3.287 90.29% Castro::do_advance_ctu() 10 3.276 3.282 3.287 90.29% Castro::construct_ctu_hydro_source() 10 2.265 2.361 2.457 67.48% Gravity::make_radial_gravity() 21 0.3383 0.3509 0.3639 10.00% Castro::construct_old_gravity() 10 0.2028 0.2133 0.2245 6.17% Gravity::get_old_grav_vector() 10 0.202 0.2126 0.2238 6.15% Gravity::get_new_grav_vector() 11 0.2194 0.2214 0.2224 6.11% Amr::init() 1 0.2016 0.2017 0.2017 5.54% Castro::construct_new_gravity() 10 0.1952 0.1964 0.1969 5.41% Amr::initialInit() 1 0.1859 0.186 0.1862 5.11% FillPatchIterator::Initialize 41 0.1595 0.1716 0.1826 5.02% Castro::initialize_do_advance() 10 0.152 0.1617 0.17 4.67% Amr::InitializeInit() 1 0.05986 0.1012 0.1572 4.32% Amr::defBaseLevel() 1 0.05986 0.1012 0.1572 4.32% FillPatchSingleLevel 41 0.1128 0.1268 0.1464 4.02% Castro::initData() 1 0.04255 0.08358 0.1379 3.79% Castro::estTimeStep() 21 0.03414 0.08618 0.1324 3.64% Amr::FinalizeInit() 1 0.02879 0.08486 0.126 3.46% Castro::expand_state() 10 0.1035 0.1146 0.1225 3.37% Castro::clean_state() 62 0.1148 0.1169 0.1192 3.27% FabArray::ParallelCopy() 41 0.07474 0.09052 0.1101 3.03% Castro::computeInitialDt() 2 0.002235 0.05822 0.09956 2.73% amrex::Copy() 193 0.06165 0.07338 0.08301 2.28% Castro::initialize_advance() 10 0.06635 0.07181 0.07818 2.15% FabArray::setVal() 143 0.0622 0.06875 0.07786 2.14% Castro::do_new_sources() 10 0.05988 0.06491 0.07354 2.02% FabArray::ParallelCopy_finish() 41 0.03242 0.04886 0.07349 2.02% Castro::computeTemp() 63 0.06782 0.06984 0.07154 1.97% Amr::writePlotFile() 2 0.06131 0.06148 0.06166 1.69% Castro::reset_internal_energy(MultiFab) 63 0.0484 0.0501 0.05177 1.42% Castro::reset_internal_energy(Fab) 1008 0.04812 0.0498 0.05146 1.41% Castro::do_old_sources() 10 0.04259 0.04528 0.04815 1.32% FabArray::ParallelCopy_nowait() 41 0.03658 0.04159 0.04334 1.19% Castro::normalize_species() 62 0.0413 0.04185 0.04267 1.17% StateDataPhysBCFunct::() 41 0.03285 0.03621 0.03909 1.07% StateData::FillBoundary(geom) 41 0.03276 0.03611 0.03898 1.07% Castro::construct_new_source() 50 0.02938 0.0318 0.03564 0.98% Castro::construct_new_gravity_source() 10 0.02342 0.02566 0.02937 0.81% Gravity::interpolate_monopole_grav() 21 0.02839 0.02862 0.02922 0.80% Castro::post_init() 1 0.02564 0.02601 0.02624 0.72% VisMF::Write(FabArray) 2 0.01347 0.01398 0.01656 0.45% Castro::post_timestep() 10 0.01558 0.01598 0.01641 0.45% Castro::apply_source_to_state() 20 0.01236 0.01403 0.01471 0.40% FabArray::Saxpy() 20 0.01232 0.01398 0.01465 0.40% Castro::Castro() 1 0.01142 0.01163 0.01252 0.34% Castro::check_for_nan() 20 0.009969 0.01082 0.01182 0.32% MultiFab::contains_nan() 20 0.009949 0.01079 0.0118 0.32% FabArray::setDomainBndry() 41 0.007862 0.01056 0.01178 0.32% Castro::construct_old_source() 50 0.007747 0.01023 0.01082 0.30% Castro::construct_old_gravity_source() 10 0.007692 0.01016 0.01075 0.30% Castro::initMFs() 1 0.006899 0.007186 0.008996 0.25% Castro::computeNewDt() 9 0.008812 0.008827 0.008835 0.24% AmrLevel::AmrLevel(dm) 1 0.005691 0.005818 0.006581 0.18% StateData::define() 4 0.005655 0.005793 0.006548 0.18% Castro::enforce_min_density() 62 0.005679 0.006018 0.006355 0.17% Castro::swap_state_time_levels() 10 0.003325 0.004374 0.004703 0.13% Castro::finalize_advance() 10 0.002993 0.00349 0.004048 0.11% Castro::post_regrid() 1 0.001558 0.001709 0.002106 0.06% Castro::buildMetrics() 1 0.001758 0.001808 0.002045 0.06% Castro::finalize_do_advance() 10 0.0006429 0.001364 0.001604 0.04% Amr::InitAmr() 1 0.0002742 0.0003076 0.0004099 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.364e-05 0.0001199 0.0001468 0.00% DistributionMapping::LeastUsedCPUs() 1 9.199e-06 0.0001132 0.0001391 0.00% Castro::enforce_consistent_e() 1 7.699e-05 8.675e-05 9.281e-05 0.00% FabArrayBase::getCPC() 41 5.71e-05 7.205e-05 9.2e-05 0.00% Amr::writeSmallPlotFile() 1 2.597e-05 5.604e-05 7.591e-05 0.00% Castro::enforce_speed_limit() 62 2.569e-05 3.067e-05 3.64e-05 0.00% FabArrayBase::CPC::define() 2 2.032e-05 2.287e-05 2.6e-05 0.00% Castro::create_source_corrector() 10 7.654e-06 9.637e-06 1.198e-05 0.00% Gravity::swapTimeLevels() 10 8.751e-06 1.033e-05 1.168e-05 0.00% Gravity::set_mass_offset() 10 9.419e-06 1.022e-05 1.072e-05 0.00% Amr::initSubcycle() 1 8.692e-06 9.438e-06 1.052e-05 0.00% Castro::FluxRegCrseInit 10 5.986e-06 8.397e-06 1.014e-05 0.00% Castro::retry_advance_ctu() 10 4.827e-06 5.65e-06 6.506e-06 0.00% Castro::FluxRegFineAdd() 10 1.823e-06 2.187e-06 2.377e-06 0.00% DistributionMapping::Distribute() 1 8.59e-07 1.041e-06 1.144e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (23.02) finalized