MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.02-45-g42acecf9c7f7) initialized Starting run at 06:42:03 UTC on 2023-02-24. Successfully read inputs file ... Castro git describe: 23.01-42-g76337b082 AMReX git describe: 23.02-45-g42acecf9c Microphysics git describe: 23.02-16-g3e0cd993 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015623495 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.365347035 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.35468244 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.334347643 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.336485238 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355980777 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342973117 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.312738494 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.314654255 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.312418186 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.312645459 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01063764 seconds Ending run at 06:42:07 UTC on 2023-02-24. Run time = 3.549728481 Run time without initialization = 3.360585699 Average number of zones advanced per microsecond: 0.780 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.548 ... 3.549 ... 3.55 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2865 2.3512 2.4066 67.79% Gravity::make_radial_gravity() 21 0.32 0.3287 0.336 9.47% Castro::do_advance_ctu() 10 0.01491 0.07084 0.1379 3.89% Castro::initData() 1 0.03825 0.0765 0.1131 3.19% Castro::estTimeStep() 21 0.02253 0.06565 0.1119 3.15% FabArray::setVal() 143 0.06774 0.07753 0.08857 2.50% amrex::Copy() 193 0.07503 0.07861 0.0853 2.40% FabArray::ParallelCopy_finish() 41 0.03351 0.04798 0.05818 1.64% Castro::reset_internal_energy(Fab) 1008 0.04928 0.05089 0.05331 1.50% FabArray::ParallelCopy_nowait() 41 0.0412 0.04343 0.04525 1.27% Castro::normalize_species() 62 0.04149 0.04261 0.04446 1.25% StateData::FillBoundary(geom) 41 0.03333 0.0375 0.04139 1.17% FillPatchIterator::Initialize 41 0.02977 0.03548 0.03817 1.08% Castro::construct_new_gravity_source() 10 0.02426 0.02775 0.03139 0.88% Gravity::interpolate_monopole_grav() 21 0.02804 0.02858 0.02894 0.82% Castro::initialize_do_advance() 10 0.01864 0.01957 0.02142 0.60% Castro::computeTemp() 63 0.01858 0.02005 0.02065 0.58% VisMF::Write(FabArray) 2 0.0135 0.01422 0.01675 0.47% FabArray::Saxpy() 20 0.01396 0.01514 0.01593 0.45% Castro::initialize_advance() 10 0.009869 0.01205 0.01451 0.41% FabArray::setDomainBndry() 41 0.008862 0.01124 0.01272 0.36% MultiFab::contains_nan() 20 0.01078 0.01147 0.01217 0.34% Castro::construct_old_gravity_source() 10 0.01044 0.01096 0.01139 0.32% Amr::writePlotFile() 2 0.006839 0.009299 0.01027 0.29% Amr::InitAmr() 1 0.00026 0.001435 0.009601 0.27% DistributionMapping::LeastUsedCPUs() 1 7.756e-06 0.008174 0.00935 0.26% Castro::initMFs() 1 0.006867 0.006902 0.006955 0.20% main() 1 0.005089 0.006167 0.006941 0.20% Castro::enforce_min_density() 62 0.005998 0.006396 0.006788 0.19% Castro::construct_new_source() 50 0.006342 0.006518 0.006703 0.19% StateData::define() 4 0.005682 0.005729 0.005785 0.16% Gravity::get_new_grav_vector() 11 0.003251 0.004225 0.005634 0.16% Castro::swap_state_time_levels() 10 0.003516 0.004675 0.004874 0.14% Gravity::get_old_grav_vector() 10 0.002067 0.002648 0.002992 0.08% Amr::coarseTimeStep() 10 0.001568 0.002273 0.002991 0.08% Castro::finalize_do_advance() 10 0.001609 0.001902 0.002205 0.06% Castro::buildMetrics() 1 0.001639 0.001654 0.001691 0.05% Castro::expand_state() 10 0.0007472 0.0008732 0.0009752 0.03% Amr::timeStep() 10 0.00018 0.0002504 0.0004745 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002939 0.000326 0.0003857 0.01% Castro::clean_state() 62 0.0001486 0.0001842 0.0002265 0.01% Castro::Castro() 1 7.686e-05 9.407e-05 0.0001242 0.00% Castro::finalize_advance() 10 9.583e-05 0.0001024 0.0001152 0.00% Castro::enforce_consistent_e() 1 7.987e-05 8.99e-05 0.000113 0.00% StateDataPhysBCFunct::() 41 9.289e-05 0.0001026 0.0001116 0.00% Amr::FinalizeInit() 1 3.912e-06 1.774e-05 0.0001077 0.00% Castro::construct_old_source() 50 5.323e-05 7.805e-05 9.32e-05 0.00% FillPatchSingleLevel 41 7.731e-05 8.225e-05 9.216e-05 0.00% Castro::do_old_sources() 10 5.566e-05 6.92e-05 9.023e-05 0.00% FabArray::ParallelCopy() 41 7.565e-05 8.014e-05 8.739e-05 0.00% Amr::writeSmallPlotFile() 1 2.568e-05 6.375e-05 8.651e-05 0.00% Castro::do_new_sources() 10 5.27e-05 6.433e-05 8.273e-05 0.00% Castro::subcycle_advance_ctu() 10 3.999e-05 4.904e-05 7.215e-05 0.00% FabArrayBase::getCPC() 41 4.703e-05 5.537e-05 6.751e-05 0.00% Castro::apply_source_to_state() 20 4.007e-05 4.92e-05 5.868e-05 0.00% Castro::construct_new_gravity() 10 3.643e-05 4.394e-05 4.934e-05 0.00% Castro::construct_old_gravity() 10 3.987e-05 4.421e-05 4.847e-05 0.00% Castro::advance() 10 3.302e-05 4.136e-05 4.573e-05 0.00% Castro::enforce_speed_limit() 62 2.627e-05 3.19e-05 4.356e-05 0.00% Amr::defBaseLevel() 1 2.683e-05 3.06e-05 4.164e-05 0.00% Castro::post_timestep() 10 1.643e-05 2.733e-05 3.624e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.137e-05 2.53e-05 3.209e-05 0.00% FabArrayBase::CPC::define() 2 2.128e-05 2.447e-05 3e-05 0.00% Castro::check_for_nan() 20 2.185e-05 2.335e-05 2.502e-05 0.00% Castro::post_init() 1 3.111e-06 6.743e-06 2.491e-05 0.00% Gravity::swapTimeLevels() 10 1.106e-05 1.361e-05 1.802e-05 0.00% Castro::create_source_corrector() 10 8.44e-06 1.058e-05 1.589e-05 0.00% Gravity::set_mass_offset() 10 9.113e-06 1.079e-05 1.175e-05 0.00% Castro::FluxRegCrseInit 10 7.187e-06 8.667e-06 1.164e-05 0.00% Castro::computeNewDt() 9 7.765e-06 8.624e-06 9.766e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.614e-06 5.315e-06 9.573e-06 0.00% Amr::initSubcycle() 1 8.939e-06 9.172e-06 9.413e-06 0.00% Amr::InitializeInit() 1 1.971e-06 3.294e-06 8.851e-06 0.00% Amr::initialInit() 1 1.161e-06 2.148e-06 7.768e-06 0.00% Castro::retry_advance_ctu() 10 5.819e-06 6.444e-06 7.612e-06 0.00% Castro::computeInitialDt() 2 3.3e-06 3.901e-06 5.453e-06 0.00% Castro::post_regrid() 1 1.852e-06 3.02e-06 4.152e-06 0.00% Amr::init() 1 1.786e-06 2.304e-06 3.293e-06 0.00% Castro::FluxRegFineAdd() 10 2.121e-06 2.424e-06 3.21e-06 0.00% DistributionMapping::Distribute() 1 8.95e-07 1.214e-06 1.777e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.548 3.549 3.55 100.00% Amr::coarseTimeStep() 10 3.343 3.343 3.343 94.18% Amr::timeStep() 10 3.33 3.331 3.332 93.86% Castro::advance() 10 3.314 3.315 3.316 93.41% Castro::subcycle_advance_ctu() 10 3.224 3.232 3.241 91.31% Castro::do_advance_ctu() 10 3.224 3.232 3.241 91.31% Castro::construct_ctu_hydro_source() 10 2.286 2.351 2.407 67.79% Gravity::make_radial_gravity() 21 0.3368 0.3464 0.3523 9.92% Gravity::get_new_grav_vector() 11 0.2258 0.2287 0.232 6.54% Castro::construct_old_gravity() 10 0.1985 0.2036 0.2088 5.88% Gravity::get_old_grav_vector() 10 0.1977 0.2028 0.2081 5.86% Castro::construct_new_gravity() 10 0.2013 0.2037 0.2066 5.82% FillPatchIterator::Initialize 41 0.1633 0.176 0.1889 5.32% Amr::init() 1 0.1794 0.1876 0.1887 5.32% Castro::initialize_do_advance() 10 0.1594 0.173 0.1845 5.20% Amr::initialInit() 1 0.1636 0.1718 0.1731 4.88% Amr::InitializeInit() 1 0.06237 0.1064 0.1442 4.06% Amr::defBaseLevel() 1 0.06237 0.1064 0.1442 4.06% FillPatchSingleLevel 41 0.1169 0.1293 0.1383 3.90% Castro::expand_state() 10 0.1093 0.1226 0.1359 3.83% Castro::clean_state() 62 0.1167 0.1195 0.1231 3.47% Castro::initData() 1 0.04227 0.08065 0.1173 3.30% Castro::estTimeStep() 21 0.02253 0.06565 0.1119 3.15% Amr::FinalizeInit() 1 0.02885 0.06538 0.1038 2.92% FabArray::ParallelCopy() 41 0.07753 0.09156 0.1019 2.87% FabArray::setVal() 143 0.06774 0.07753 0.08857 2.50% Castro::initialize_advance() 10 0.06985 0.07862 0.08657 2.44% amrex::Copy() 193 0.07503 0.07861 0.0853 2.40% Castro::do_new_sources() 10 0.06243 0.07031 0.07828 2.21% Castro::computeInitialDt() 2 0.002057 0.03869 0.07702 2.17% Castro::computeTemp() 63 0.06939 0.07127 0.07392 2.08% FabArray::ParallelCopy_finish() 41 0.03351 0.04798 0.05818 1.64% Castro::reset_internal_energy(MultiFab) 63 0.04961 0.05122 0.05365 1.51% Castro::reset_internal_energy(Fab) 1008 0.04928 0.05089 0.05331 1.50% Castro::do_old_sources() 10 0.04666 0.0472 0.04785 1.35% FabArray::ParallelCopy_nowait() 41 0.04128 0.04351 0.04533 1.28% Castro::normalize_species() 62 0.04149 0.04261 0.04446 1.25% StateDataPhysBCFunct::() 41 0.03344 0.0376 0.04148 1.17% StateData::FillBoundary(geom) 41 0.03333 0.0375 0.04139 1.17% Castro::construct_new_source() 50 0.03067 0.03426 0.038 1.07% Castro::construct_new_gravity_source() 10 0.02426 0.02775 0.03139 0.88% Gravity::interpolate_monopole_grav() 21 0.02804 0.02858 0.02894 0.82% Amr::writePlotFile() 2 0.02639 0.02649 0.02673 0.75% Castro::post_init() 1 0.0258 0.02609 0.02624 0.74% VisMF::Write(FabArray) 2 0.0135 0.01422 0.01675 0.47% Castro::post_timestep() 10 0.01536 0.01593 0.01624 0.46% Castro::apply_source_to_state() 20 0.01401 0.01519 0.01599 0.45% FabArray::Saxpy() 20 0.01396 0.01514 0.01593 0.45% FabArray::setDomainBndry() 41 0.008862 0.01124 0.01272 0.36% Castro::check_for_nan() 20 0.0108 0.01149 0.01219 0.34% MultiFab::contains_nan() 20 0.01078 0.01147 0.01217 0.34% Castro::Castro() 1 0.01171 0.0118 0.01193 0.34% Castro::construct_old_source() 50 0.0105 0.01104 0.01148 0.32% Castro::construct_old_gravity_source() 10 0.01044 0.01096 0.01139 0.32% Amr::InitAmr() 1 0.0002689 0.001444 0.00961 0.27% DistributionMapping::SFCProcessorMapDoIt() 1 1.226e-05 0.00818 0.009357 0.26% DistributionMapping::LeastUsedCPUs() 1 7.756e-06 0.008174 0.00935 0.26% Castro::computeNewDt() 9 0.008635 0.008657 0.008666 0.24% Castro::initMFs() 1 0.006867 0.006902 0.006955 0.20% Castro::enforce_min_density() 62 0.005998 0.006396 0.006788 0.19% AmrLevel::AmrLevel(dm) 1 0.005705 0.005754 0.005812 0.16% StateData::define() 4 0.005682 0.005729 0.005785 0.16% Castro::swap_state_time_levels() 10 0.003516 0.004675 0.004874 0.14% Castro::finalize_advance() 10 0.003042 0.003795 0.004674 0.13% Castro::finalize_do_advance() 10 0.001609 0.001902 0.002205 0.06% Castro::buildMetrics() 1 0.001771 0.00179 0.001818 0.05% Castro::post_regrid() 1 0.001586 0.001651 0.001717 0.05% Castro::enforce_consistent_e() 1 7.987e-05 8.99e-05 0.000113 0.00% FabArrayBase::getCPC() 41 6.875e-05 7.984e-05 9.239e-05 0.00% Amr::writeSmallPlotFile() 1 2.568e-05 6.375e-05 8.651e-05 0.00% Castro::enforce_speed_limit() 62 2.627e-05 3.19e-05 4.356e-05 0.00% FabArrayBase::CPC::define() 2 2.128e-05 2.447e-05 3e-05 0.00% Gravity::swapTimeLevels() 10 1.106e-05 1.361e-05 1.802e-05 0.00% Castro::create_source_corrector() 10 8.44e-06 1.058e-05 1.589e-05 0.00% Gravity::set_mass_offset() 10 9.113e-06 1.079e-05 1.175e-05 0.00% Castro::FluxRegCrseInit 10 7.187e-06 8.667e-06 1.164e-05 0.00% Amr::initSubcycle() 1 8.939e-06 9.172e-06 9.413e-06 0.00% Castro::retry_advance_ctu() 10 5.819e-06 6.444e-06 7.612e-06 0.00% Castro::FluxRegFineAdd() 10 2.121e-06 2.424e-06 3.21e-06 0.00% DistributionMapping::Distribute() 1 8.95e-07 1.214e-06 1.777e-06 0.00% ------------------------------------------------------------------------------------------- Cpu (amrex_mempool) Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 27 B 31 B 37 B 8192 KiB 8192 KiB 8192 KiB amrex_mempool_init() 8 8 15 KiB 15 KiB 15 KiB 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (23.02-45-g42acecf9c7f7) finalized