MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.03-16-g5f8030af0ddf) initialized Starting run at 05:42:31 UTC on 2023-03-20. Successfully read inputs file ... Castro git describe: 23.03-9-ge8cab45ef AMReX git describe: 23.03-16-g5f8030af0 Microphysics git describe: 23.03-18-g87518821 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.018457757 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.367046957 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.352820356 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.32915883 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.330206301 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.35734538 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.329654918 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.31182777 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.312127687 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.312080979 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.312937148 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.049142632 seconds Ending run at 05:42:35 UTC on 2023-03-20. Run time = 3.628535966 Run time without initialization = 3.371765722 Average number of zones advanced per microsecond: 0.777 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.627 ... 3.628 ... 3.629 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.3059 2.3509 2.3882 65.82% Gravity::make_radial_gravity() 21 0.3271 0.3368 0.3504 9.66% Castro::initData() 1 0.04029 0.0905 0.1637 4.51% Castro::estTimeStep() 21 0.0228 0.1102 0.1636 4.51% Castro::do_advance_ctu() 10 0.04197 0.08202 0.1282 3.53% FabArray::setVal() 143 0.06429 0.07009 0.07971 2.20% amrex::Copy() 193 0.06189 0.06983 0.07801 2.15% FabArray::ParallelCopy_finish() 41 0.03527 0.04602 0.07067 1.95% Castro::reset_internal_energy(Fab) 1008 0.04757 0.05018 0.05382 1.48% Amr::writePlotFile() 2 0.0461 0.05066 0.0526 1.45% Castro::normalize_species() 62 0.04118 0.04247 0.04479 1.23% FabArray::ParallelCopy_nowait() 41 0.03618 0.04083 0.04253 1.17% StateData::FillBoundary(geom) 41 0.03398 0.03717 0.03977 1.10% FillPatchIterator::Initialize 41 0.02971 0.03338 0.03564 0.98% Gravity::interpolate_monopole_grav() 21 0.02818 0.02869 0.02945 0.81% Castro::construct_new_gravity_source() 10 0.02331 0.02585 0.02904 0.80% Castro::computeTemp() 63 0.0173 0.0198 0.02099 0.58% VisMF::Write(FabArray) 2 0.01388 0.01502 0.01924 0.53% Castro::initialize_do_advance() 10 0.01278 0.01713 0.01909 0.53% FabArray::Saxpy() 20 0.01221 0.01394 0.01485 0.41% Castro::initialize_advance() 10 0.008201 0.01121 0.01414 0.39% FabArray::setDomainBndry() 41 0.008595 0.0112 0.01258 0.35% MultiFab::contains_nan() 20 0.01019 0.01102 0.01179 0.33% Castro::initMFs() 1 0.007066 0.008116 0.0111 0.31% Castro::construct_old_gravity_source() 10 0.007612 0.01033 0.01104 0.30% StateData::define() 4 0.00583 0.006598 0.008548 0.24% main() 1 0.005336 0.006059 0.006752 0.19% Castro::construct_new_source() 50 0.005784 0.006172 0.006482 0.18% Castro::enforce_min_density() 62 0.005725 0.005949 0.00623 0.17% Castro::swap_state_time_levels() 10 0.003459 0.004557 0.005028 0.14% Gravity::get_new_grav_vector() 11 0.002868 0.003646 0.004427 0.12% Amr::coarseTimeStep() 10 0.001553 0.002139 0.002959 0.08% Gravity::get_old_grav_vector() 10 0.001741 0.002346 0.002874 0.08% Castro::buildMetrics() 1 0.001653 0.001855 0.002434 0.07% Castro::finalize_do_advance() 10 0.0007859 0.001873 0.002303 0.06% Castro::expand_state() 10 0.0007052 0.0008097 0.0008849 0.02% Amr::InitAmr() 1 0.0002749 0.0003608 0.0005124 0.01% Amr::timeStep() 10 0.0002068 0.0002498 0.0003759 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002803 0.0002915 0.0003173 0.01% DistributionMapping::LeastUsedCPUs() 1 7.221e-06 0.0001859 0.0002797 0.01% Castro::enforce_consistent_e() 1 7.911e-05 0.0001033 0.0001737 0.00% Castro::clean_state() 62 0.0001363 0.0001523 0.0001643 0.00% Castro::finalize_advance() 10 8.155e-05 9.316e-05 0.0001036 0.00% StateDataPhysBCFunct::() 41 7.636e-05 8.854e-05 9.791e-05 0.00% FabArray::ParallelCopy() 41 6.119e-05 6.987e-05 8.842e-05 0.00% Amr::FinalizeInit() 1 4.571e-06 1.55e-05 8.726e-05 0.00% Castro::construct_old_source() 50 5.657e-05 7.122e-05 8.125e-05 0.00% Castro::Castro() 1 5.648e-05 7.118e-05 7.971e-05 0.00% Amr::writeSmallPlotFile() 1 2.547e-05 6.055e-05 7.35e-05 0.00% FillPatchSingleLevel 41 6.35e-05 7.022e-05 7.271e-05 0.00% Castro::do_old_sources() 10 5.343e-05 6.339e-05 7.052e-05 0.00% Castro::do_new_sources() 10 5.966e-05 6.375e-05 6.948e-05 0.00% Castro::advance() 10 3.229e-05 4.322e-05 6.118e-05 0.00% FabArrayBase::getCPC() 41 4.174e-05 5.177e-05 6.006e-05 0.00% Castro::apply_source_to_state() 20 3.83e-05 4.576e-05 5.285e-05 0.00% Castro::construct_old_gravity() 10 3.651e-05 4.088e-05 5.049e-05 0.00% Castro::construct_new_gravity() 10 3.725e-05 4.178e-05 5.018e-05 0.00% Castro::subcycle_advance_ctu() 10 3.391e-05 4.161e-05 4.61e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.402e-05 3.085e-05 4.275e-05 0.00% Amr::defBaseLevel() 1 2.164e-05 2.675e-05 4.055e-05 0.00% Castro::enforce_speed_limit() 62 2.58e-05 2.794e-05 2.994e-05 0.00% FabArrayBase::CPC::define() 2 2.265e-05 2.509e-05 2.813e-05 0.00% Castro::check_for_nan() 20 2.087e-05 2.26e-05 2.504e-05 0.00% Gravity::swapTimeLevels() 10 9.729e-06 1.241e-05 2.03e-05 0.00% Castro::post_timestep() 10 1.404e-05 1.511e-05 1.683e-05 0.00% Amr::initSubcycle() 1 8.93e-06 1.125e-05 1.667e-05 0.00% Gravity::set_mass_offset() 10 8.937e-06 1.048e-05 1.282e-05 0.00% Castro::create_source_corrector() 10 7.779e-06 9.539e-06 1.09e-05 0.00% Castro::FluxRegCrseInit 10 7.734e-06 9.206e-06 1.031e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.586e-06 5.358e-06 8.928e-06 0.00% Castro::computeNewDt() 9 7.403e-06 8.026e-06 8.703e-06 0.00% Castro::retry_advance_ctu() 10 4.309e-06 5.678e-06 6.259e-06 0.00% Castro::post_init() 1 3.607e-06 4.41e-06 5.994e-06 0.00% Amr::InitializeInit() 1 1.837e-06 2.86e-06 5.877e-06 0.00% Castro::computeInitialDt() 2 3.823e-06 4.409e-06 4.88e-06 0.00% Castro::post_regrid() 1 2.226e-06 3.037e-06 3.696e-06 0.00% Amr::init() 1 1.969e-06 2.336e-06 2.77e-06 0.00% Castro::FluxRegFineAdd() 10 1.989e-06 2.366e-06 2.66e-06 0.00% DistributionMapping::Distribute() 1 9.58e-07 1.295e-06 2.206e-06 0.00% Amr::initialInit() 1 1.37e-06 1.711e-06 2.139e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.627 3.628 3.629 100.00% Amr::coarseTimeStep() 10 3.316 3.316 3.316 91.38% Amr::timeStep() 10 3.303 3.304 3.304 91.06% Castro::advance() 10 3.287 3.288 3.288 90.62% Castro::subcycle_advance_ctu() 10 3.205 3.211 3.215 88.60% Castro::do_advance_ctu() 10 3.205 3.211 3.215 88.59% Castro::construct_ctu_hydro_source() 10 2.306 2.351 2.388 65.82% Gravity::make_radial_gravity() 21 0.3428 0.3531 0.3654 10.07% Amr::init() 1 0.256 0.2562 0.2563 7.06% Amr::initialInit() 1 0.2365 0.2373 0.238 6.56% Gravity::get_new_grav_vector() 11 0.2304 0.2338 0.2364 6.52% Castro::construct_old_gravity() 10 0.1953 0.2028 0.2119 5.84% Gravity::get_old_grav_vector() 10 0.1945 0.2021 0.2113 5.82% Castro::construct_new_gravity() 10 0.1925 0.1947 0.1963 5.41% Amr::InitializeInit() 1 0.06161 0.1141 0.1935 5.33% Amr::defBaseLevel() 1 0.06161 0.1141 0.1935 5.33% FillPatchIterator::Initialize 41 0.1555 0.1689 0.1812 4.99% Amr::FinalizeInit() 1 0.04449 0.1232 0.1759 4.85% Castro::initData() 1 0.04426 0.09493 0.1695 4.67% Castro::initialize_do_advance() 10 0.154 0.1618 0.1691 4.66% Castro::estTimeStep() 21 0.0228 0.1102 0.1636 4.51% FillPatchSingleLevel 41 0.1148 0.1243 0.1429 3.94% Castro::computeInitialDt() 2 0.003188 0.08275 0.1351 3.72% Castro::clean_state() 62 0.1113 0.1177 0.1246 3.44% Castro::expand_state() 10 0.1043 0.1147 0.1221 3.36% FabArray::ParallelCopy() 41 0.07693 0.087 0.107 2.95% FabArray::setVal() 143 0.06429 0.07009 0.07971 2.20% Castro::initialize_advance() 10 0.06842 0.07343 0.07948 2.19% amrex::Copy() 193 0.06189 0.06983 0.07801 2.15% Castro::computeTemp() 63 0.06516 0.07027 0.07513 2.07% Castro::do_new_sources() 10 0.06 0.06621 0.07471 2.06% FabArray::ParallelCopy_finish() 41 0.03527 0.04602 0.07067 1.95% Amr::writePlotFile() 2 0.06729 0.06813 0.06901 1.90% Castro::reset_internal_energy(MultiFab) 63 0.04786 0.05047 0.05414 1.49% Castro::reset_internal_energy(Fab) 1008 0.04757 0.05018 0.05382 1.48% Castro::do_old_sources() 10 0.04016 0.04525 0.04662 1.28% Castro::normalize_species() 62 0.04118 0.04247 0.04479 1.23% FabArray::ParallelCopy_nowait() 41 0.03626 0.04091 0.04261 1.17% Castro::post_init() 1 0.0396 0.04014 0.04069 1.12% StateDataPhysBCFunct::() 41 0.03406 0.03726 0.03986 1.10% StateData::FillBoundary(geom) 41 0.03398 0.03717 0.03977 1.10% Castro::construct_new_source() 50 0.02945 0.03202 0.03552 0.98% Gravity::interpolate_monopole_grav() 21 0.02818 0.02869 0.02945 0.81% Castro::construct_new_gravity_source() 10 0.02331 0.02585 0.02904 0.80% VisMF::Write(FabArray) 2 0.01388 0.01502 0.01924 0.53% Castro::post_timestep() 10 0.01505 0.01583 0.01617 0.45% Castro::Castro() 1 0.01114 0.01232 0.01535 0.42% Castro::apply_source_to_state() 20 0.01225 0.01399 0.01489 0.41% FabArray::Saxpy() 20 0.01221 0.01394 0.01485 0.41% FabArray::setDomainBndry() 41 0.008595 0.0112 0.01258 0.35% Castro::check_for_nan() 20 0.01022 0.01104 0.01181 0.33% MultiFab::contains_nan() 20 0.01019 0.01102 0.01179 0.33% Castro::construct_old_source() 50 0.007669 0.0104 0.01111 0.31% Castro::initMFs() 1 0.007066 0.008116 0.0111 0.31% Castro::construct_old_gravity_source() 10 0.007612 0.01033 0.01104 0.30% AmrLevel::AmrLevel(dm) 1 0.005859 0.006629 0.008584 0.24% StateData::define() 4 0.00583 0.006598 0.008548 0.24% Castro::computeNewDt() 9 0.008412 0.00842 0.00843 0.23% Castro::enforce_min_density() 62 0.005725 0.005949 0.00623 0.17% Castro::swap_state_time_levels() 10 0.003459 0.004557 0.005028 0.14% Castro::finalize_advance() 10 0.00294 0.003355 0.003795 0.10% Castro::post_regrid() 1 0.001577 0.001959 0.002991 0.08% Castro::buildMetrics() 1 0.001774 0.002 0.002643 0.07% Castro::finalize_do_advance() 10 0.0007859 0.001873 0.002303 0.06% Amr::InitAmr() 1 0.0002842 0.000372 0.000529 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.267e-05 0.0001926 0.0002874 0.01% DistributionMapping::LeastUsedCPUs() 1 7.221e-06 0.0001859 0.0002797 0.01% Castro::enforce_consistent_e() 1 7.911e-05 0.0001033 0.0001737 0.00% FabArrayBase::getCPC() 41 6.586e-05 7.686e-05 8.793e-05 0.00% Amr::writeSmallPlotFile() 1 2.547e-05 6.055e-05 7.35e-05 0.00% Castro::enforce_speed_limit() 62 2.58e-05 2.794e-05 2.994e-05 0.00% FabArrayBase::CPC::define() 2 2.265e-05 2.509e-05 2.813e-05 0.00% Gravity::swapTimeLevels() 10 9.729e-06 1.241e-05 2.03e-05 0.00% Amr::initSubcycle() 1 8.93e-06 1.125e-05 1.667e-05 0.00% Gravity::set_mass_offset() 10 8.937e-06 1.048e-05 1.282e-05 0.00% Castro::create_source_corrector() 10 7.779e-06 9.539e-06 1.09e-05 0.00% Castro::FluxRegCrseInit 10 7.734e-06 9.206e-06 1.031e-05 0.00% Castro::retry_advance_ctu() 10 4.309e-06 5.678e-06 6.259e-06 0.00% Castro::FluxRegFineAdd() 10 1.989e-06 2.366e-06 2.66e-06 0.00% DistributionMapping::Distribute() 1 9.58e-07 1.295e-06 2.206e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 33 B 37 B 46 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (23.03-16-g5f8030af0ddf) finalized