MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.03-16-g5f8030af0ddf) initialized Starting run at 05:41:50 UTC on 2023-03-21. Successfully read inputs file ... Castro git describe: 23.03-9-ge8cab45ef AMReX git describe: 23.03-16-g5f8030af0 Microphysics git describe: 23.03-19-gd6c98ffe reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016589885 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.36490953 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.389401374 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.32738832 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.328235124 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.356277185 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.328899949 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.309803173 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.30988466 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.309910869 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.316163944 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010453315 seconds Ending run at 05:41:53 UTC on 2023-03-21. Run time = 3.549515222 Run time without initialization = 3.358866586 Average number of zones advanced per microsecond: 0.780 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.548 ... 3.549 ... 3.55 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2942 2.3500 2.3931 67.42% Gravity::make_radial_gravity() 21 0.3237 0.3385 0.35 9.86% Castro::do_advance_ctu() 10 0.04689 0.09104 0.1483 4.18% Castro::initData() 1 0.03859 0.08653 0.1169 3.29% Castro::estTimeStep() 21 0.02615 0.05902 0.1156 3.26% amrex::Copy() 193 0.06148 0.07233 0.08051 2.27% FabArray::setVal() 143 0.06298 0.0691 0.07856 2.21% FabArray::ParallelCopy_finish() 41 0.03716 0.04874 0.06727 1.90% Castro::reset_internal_energy(Fab) 1008 0.04821 0.05064 0.05286 1.49% Castro::normalize_species() 62 0.04148 0.04237 0.0444 1.25% FabArray::ParallelCopy_nowait() 41 0.03807 0.04169 0.0439 1.24% StateData::FillBoundary(geom) 41 0.03371 0.03769 0.04042 1.14% FillPatchIterator::Initialize 41 0.02964 0.03391 0.0361 1.02% Gravity::interpolate_monopole_grav() 21 0.02826 0.02863 0.0293 0.83% Castro::construct_new_gravity_source() 10 0.02294 0.02564 0.02906 0.82% Castro::computeTemp() 63 0.01933 0.02005 0.02058 0.58% Castro::initialize_do_advance() 10 0.0127 0.01774 0.01944 0.55% VisMF::Write(FabArray) 2 0.0136 0.01463 0.01748 0.49% FabArray::Saxpy() 20 0.0125 0.01396 0.01477 0.42% Castro::initialize_advance() 10 0.008201 0.01099 0.01368 0.39% FabArray::setDomainBndry() 41 0.00887 0.01148 0.01266 0.36% MultiFab::contains_nan() 20 0.0103 0.01079 0.01167 0.33% Castro::construct_old_gravity_source() 10 0.008555 0.0103 0.01089 0.31% Amr::writePlotFile() 2 0.006885 0.009645 0.01044 0.29% Castro::initMFs() 1 0.006899 0.008051 0.0103 0.29% StateData::define() 4 0.005784 0.006714 0.008405 0.24% main() 1 0.005155 0.00624 0.0068 0.19% Castro::construct_new_source() 50 0.005864 0.006207 0.006561 0.18% Castro::enforce_min_density() 62 0.005682 0.005925 0.006329 0.18% Gravity::get_new_grav_vector() 11 0.003489 0.004188 0.0057 0.16% Castro::swap_state_time_levels() 10 0.00338 0.004525 0.004771 0.13% Amr::coarseTimeStep() 10 0.001129 0.002226 0.003198 0.09% Gravity::get_old_grav_vector() 10 0.00183 0.002504 0.002866 0.08% Castro::buildMetrics() 1 0.001612 0.001886 0.002421 0.07% Castro::finalize_do_advance() 10 0.0007433 0.001535 0.001892 0.05% Castro::expand_state() 10 0.0008081 0.000967 0.001097 0.03% Amr::InitAmr() 1 0.0002992 0.0003774 0.0006703 0.02% Amr::timeStep() 10 0.0001683 0.0002414 0.0004293 0.01% DistributionMapping::LeastUsedCPUs() 1 8.115e-06 0.0003182 0.000405 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002834 0.0003003 0.0003446 0.01% Castro::clean_state() 62 0.0001356 0.0001544 0.0001729 0.00% Castro::enforce_consistent_e() 1 7.503e-05 9.383e-05 0.0001323 0.00% Castro::finalize_advance() 10 8.047e-05 9.278e-05 0.000103 0.00% StateDataPhysBCFunct::() 41 7.693e-05 8.55e-05 0.0001009 0.00% Amr::writeSmallPlotFile() 1 4.095e-05 7.629e-05 8.575e-05 0.00% Castro::construct_old_source() 50 4.895e-05 6.834e-05 8.08e-05 0.00% FillPatchSingleLevel 41 6.701e-05 7.048e-05 7.92e-05 0.00% Castro::Castro() 1 5.82e-05 6.581e-05 7.684e-05 0.00% Castro::do_old_sources() 10 5.231e-05 6.322e-05 7.479e-05 0.00% Castro::do_new_sources() 10 5.628e-05 6.259e-05 7.474e-05 0.00% Amr::FinalizeInit() 1 3.572e-06 1.337e-05 7.424e-05 0.00% FabArray::ParallelCopy() 41 6.35e-05 6.785e-05 7.4e-05 0.00% FabArrayBase::getCPC() 41 4.334e-05 4.788e-05 5.45e-05 0.00% Castro::construct_old_gravity() 10 3.535e-05 4.204e-05 5.214e-05 0.00% Castro::subcycle_advance_ctu() 10 3.578e-05 4.127e-05 4.916e-05 0.00% Castro::advance() 10 3.516e-05 3.985e-05 4.809e-05 0.00% Castro::apply_source_to_state() 20 4.001e-05 4.401e-05 4.703e-05 0.00% Castro::construct_new_gravity() 10 3.408e-05 3.879e-05 4.687e-05 0.00% Amr::defBaseLevel() 1 1.784e-05 2.566e-05 4.104e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.494e-05 3.061e-05 3.737e-05 0.00% FabArrayBase::CPC::define() 2 2.133e-05 2.443e-05 3.008e-05 0.00% Castro::enforce_speed_limit() 62 2.47e-05 2.654e-05 3.002e-05 0.00% Castro::check_for_nan() 20 2.183e-05 2.385e-05 2.791e-05 0.00% Amr::initSubcycle() 1 8.95e-06 1.259e-05 2.484e-05 0.00% Gravity::swapTimeLevels() 10 8.593e-06 1.258e-05 2.445e-05 0.00% Castro::post_timestep() 10 1.236e-05 1.462e-05 1.556e-05 0.00% Gravity::set_mass_offset() 10 9.236e-06 1.027e-05 1.177e-05 0.00% Castro::FluxRegCrseInit 10 5.996e-06 9.013e-06 1.118e-05 0.00% Castro::create_source_corrector() 10 7.143e-06 9.153e-06 1.061e-05 0.00% Castro::computeNewDt() 9 7.147e-06 8.208e-06 1.003e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.052e-06 6.093e-06 8.142e-06 0.00% Amr::InitializeInit() 1 2.012e-06 2.889e-06 7.07e-06 0.00% Castro::retry_advance_ctu() 10 4.701e-06 5.664e-06 6.335e-06 0.00% Castro::post_init() 1 3.287e-06 4.283e-06 6.195e-06 0.00% Castro::computeInitialDt() 2 3.773e-06 4.496e-06 5.204e-06 0.00% Castro::post_regrid() 1 1.787e-06 2.933e-06 4.038e-06 0.00% Castro::FluxRegFineAdd() 10 1.83e-06 2.285e-06 2.828e-06 0.00% Amr::init() 1 1.783e-06 2.175e-06 2.565e-06 0.00% Amr::initialInit() 1 1.521e-06 1.78e-06 2.483e-06 0.00% DistributionMapping::Distribute() 1 1.076e-06 1.338e-06 1.528e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.548 3.549 3.55 100.00% Amr::coarseTimeStep() 10 3.342 3.342 3.342 94.14% Amr::timeStep() 10 3.329 3.33 3.331 93.83% Castro::advance() 10 3.313 3.313 3.314 93.36% Castro::subcycle_advance_ctu() 10 3.232 3.237 3.241 91.32% Castro::do_advance_ctu() 10 3.232 3.237 3.241 91.31% Castro::construct_ctu_hydro_source() 10 2.294 2.35 2.393 67.42% Gravity::make_radial_gravity() 21 0.34 0.355 0.3634 10.24% Gravity::get_new_grav_vector() 11 0.2234 0.2266 0.2286 6.44% Castro::construct_old_gravity() 10 0.2012 0.2125 0.2214 6.24% Gravity::get_old_grav_vector() 10 0.2005 0.2117 0.2207 6.22% Castro::construct_new_gravity() 10 0.1946 0.1961 0.1968 5.54% Amr::init() 1 0.1898 0.1901 0.1902 5.36% FillPatchIterator::Initialize 41 0.1609 0.1738 0.1834 5.17% Castro::initialize_do_advance() 10 0.1556 0.1679 0.1739 4.90% Amr::initialInit() 1 0.1731 0.1736 0.1738 4.90% FillPatchSingleLevel 41 0.1166 0.1284 0.1448 4.08% Amr::InitializeInit() 1 0.05913 0.1095 0.139 3.92% Amr::defBaseLevel() 1 0.05913 0.1095 0.139 3.92% Castro::expand_state() 10 0.1065 0.1194 0.1261 3.55% Castro::clean_state() 62 0.1148 0.1184 0.1222 3.44% Castro::initData() 1 0.0424 0.09063 0.1204 3.39% Castro::estTimeStep() 21 0.02615 0.05902 0.1156 3.26% Amr::FinalizeInit() 1 0.03445 0.06403 0.1147 3.23% FabArray::ParallelCopy() 41 0.07895 0.09057 0.1055 2.97% Castro::computeInitialDt() 2 0.002238 0.03163 0.08211 2.31% amrex::Copy() 193 0.06148 0.07233 0.08051 2.27% FabArray::setVal() 143 0.06298 0.0691 0.07856 2.21% Castro::initialize_advance() 10 0.06768 0.07255 0.07853 2.21% Castro::do_new_sources() 10 0.06011 0.0661 0.07506 2.11% Castro::computeTemp() 63 0.06782 0.07099 0.07373 2.08% FabArray::ParallelCopy_finish() 41 0.03716 0.04874 0.06727 1.90% Castro::reset_internal_energy(MultiFab) 63 0.04849 0.05094 0.05316 1.50% Castro::reset_internal_energy(Fab) 1008 0.04821 0.05064 0.05286 1.49% Castro::do_old_sources() 10 0.04317 0.04533 0.04764 1.34% Castro::normalize_species() 62 0.04148 0.04237 0.0444 1.25% FabArray::ParallelCopy_nowait() 41 0.03815 0.04176 0.04397 1.24% StateDataPhysBCFunct::() 41 0.03379 0.03778 0.04051 1.14% StateData::FillBoundary(geom) 41 0.03371 0.03769 0.04042 1.14% Castro::construct_new_source() 50 0.02903 0.03185 0.03562 1.00% Castro::post_init() 1 0.03045 0.0317 0.03221 0.91% Gravity::interpolate_monopole_grav() 21 0.02826 0.02863 0.0293 0.83% Castro::construct_new_gravity_source() 10 0.02294 0.02564 0.02906 0.82% Amr::writePlotFile() 2 0.02685 0.02709 0.02734 0.77% VisMF::Write(FabArray) 2 0.0136 0.01463 0.01748 0.49% Castro::post_timestep() 10 0.01571 0.0161 0.01656 0.47% Castro::apply_source_to_state() 20 0.01254 0.01401 0.01482 0.42% FabArray::Saxpy() 20 0.0125 0.01396 0.01477 0.42% Castro::Castro() 1 0.01047 0.01179 0.01452 0.41% FabArray::setDomainBndry() 41 0.00887 0.01148 0.01266 0.36% Castro::check_for_nan() 20 0.01033 0.01081 0.01169 0.33% MultiFab::contains_nan() 20 0.0103 0.01079 0.01167 0.33% Castro::construct_old_source() 50 0.008604 0.01037 0.01095 0.31% Castro::construct_old_gravity_source() 10 0.008555 0.0103 0.01089 0.31% Castro::initMFs() 1 0.006899 0.008051 0.0103 0.29% Castro::computeNewDt() 9 0.008573 0.008626 0.008653 0.24% AmrLevel::AmrLevel(dm) 1 0.00581 0.006745 0.008442 0.24% StateData::define() 4 0.005784 0.006714 0.008405 0.24% Castro::enforce_min_density() 62 0.005682 0.005925 0.006329 0.18% Castro::swap_state_time_levels() 10 0.00338 0.004525 0.004771 0.13% Castro::finalize_advance() 10 0.002951 0.003406 0.004017 0.11% Castro::post_regrid() 1 0.00153 0.001936 0.002955 0.08% Castro::buildMetrics() 1 0.001726 0.002032 0.002633 0.07% Castro::finalize_do_advance() 10 0.0007433 0.001535 0.001892 0.05% Amr::InitAmr() 1 0.000309 0.00039 0.0006867 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.342e-05 0.0003257 0.0004124 0.01% DistributionMapping::LeastUsedCPUs() 1 8.115e-06 0.0003182 0.000405 0.01% Castro::enforce_consistent_e() 1 7.503e-05 9.383e-05 0.0001323 0.00% Amr::writeSmallPlotFile() 1 4.095e-05 7.629e-05 8.575e-05 0.00% FabArrayBase::getCPC() 41 6.71e-05 7.231e-05 8.037e-05 0.00% FabArrayBase::CPC::define() 2 2.133e-05 2.443e-05 3.008e-05 0.00% Castro::enforce_speed_limit() 62 2.47e-05 2.654e-05 3.002e-05 0.00% Amr::initSubcycle() 1 8.95e-06 1.259e-05 2.484e-05 0.00% Gravity::swapTimeLevels() 10 8.593e-06 1.258e-05 2.445e-05 0.00% Gravity::set_mass_offset() 10 9.236e-06 1.027e-05 1.177e-05 0.00% Castro::FluxRegCrseInit 10 5.996e-06 9.013e-06 1.118e-05 0.00% Castro::create_source_corrector() 10 7.143e-06 9.153e-06 1.061e-05 0.00% Castro::retry_advance_ctu() 10 4.701e-06 5.664e-06 6.335e-06 0.00% Castro::FluxRegFineAdd() 10 1.83e-06 2.285e-06 2.828e-06 0.00% DistributionMapping::Distribute() 1 1.076e-06 1.338e-06 1.528e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 33 B 36 B 47 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (23.03-16-g5f8030af0ddf) finalized