MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.03-30-gd781598bc94b) initialized Starting run at 14:13:56 UTC on 2023-03-31. Successfully read inputs file ... Castro git describe: 23.03-21-g36f38c270 AMReX git describe: 23.03-30-gd781598bc Microphysics git describe: 23.03-24-g6e65f17a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015666583 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.386037086 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.396961834 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.327445557 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.327988202 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.355611015 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.329356662 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.310267805 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.31074059 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.312657701 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.312370641 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010345774 seconds Ending run at 14:13:59 UTC on 2023-03-31. Run time = 3.581815537 Run time without initialization = 3.387440188 Average number of zones advanced per microsecond: 0.774 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.581 ... 3.581 ... 3.582 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2630 2.3491 2.4502 68.40% Gravity::make_radial_gravity() 21 0.3212 0.3271 0.3368 9.40% Castro::do_advance_ctu() 10 0.02613 0.13 0.2163 6.04% Castro::estTimeStep() 21 0.03263 0.07193 0.1304 3.64% Castro::initData() 1 0.03909 0.08779 0.1259 3.51% FabArray::setVal() 143 0.06098 0.06761 0.07729 2.16% FabArray::ParallelCopy_finish() 41 0.03812 0.04903 0.07684 2.15% amrex::Copy() 193 0.0594 0.06889 0.07585 2.12% Castro::reset_internal_energy(Fab) 1008 0.04716 0.05026 0.05364 1.50% Castro::normalize_species() 62 0.04125 0.04236 0.04388 1.23% FabArray::ParallelCopy_nowait() 41 0.03817 0.04138 0.04249 1.19% StateData::FillBoundary(geom) 41 0.03239 0.03562 0.03879 1.08% FillPatchIterator::Initialize 41 0.03002 0.03372 0.03594 1.00% Castro::construct_new_gravity_source() 10 0.02321 0.02667 0.03338 0.93% Gravity::interpolate_monopole_grav() 21 0.02774 0.02805 0.02847 0.79% Castro::computeTemp() 63 0.01786 0.01989 0.02166 0.60% Castro::initialize_do_advance() 10 0.01276 0.01749 0.01976 0.55% VisMF::Write(FabArray) 2 0.01324 0.01395 0.01658 0.46% FabArray::Saxpy() 20 0.01263 0.01381 0.01477 0.41% Castro::initialize_advance() 10 0.004523 0.01009 0.01351 0.38% MultiFab::contains_nan() 20 0.01118 0.0122 0.01288 0.36% FabArray::setDomainBndry() 41 0.00884 0.01118 0.01241 0.35% Amr::writePlotFile() 2 0.006942 0.009596 0.01129 0.32% Castro::construct_old_gravity_source() 10 0.007695 0.01018 0.01082 0.30% Castro::initMFs() 1 0.00701 0.008118 0.01067 0.30% StateData::define() 4 0.005795 0.006633 0.008544 0.24% main() 1 0.005763 0.006278 0.006911 0.19% Castro::construct_new_source() 50 0.005837 0.006188 0.006599 0.18% Castro::enforce_min_density() 62 0.005881 0.006084 0.006376 0.18% Castro::swap_state_time_levels() 10 0.003387 0.004472 0.004836 0.14% Gravity::get_new_grav_vector() 11 0.003165 0.003664 0.004235 0.12% Amr::coarseTimeStep() 10 0.001669 0.002669 0.003245 0.09% Gravity::get_old_grav_vector() 10 0.001814 0.002266 0.002589 0.07% Castro::buildMetrics() 1 0.001639 0.001882 0.00245 0.07% Castro::finalize_do_advance() 10 0.0007969 0.001694 0.002139 0.06% Castro::expand_state() 10 0.0006931 0.0009119 0.001019 0.03% Amr::timeStep() 10 0.0001808 0.0002507 0.0005328 0.01% Amr::InitAmr() 1 0.0002906 0.0003597 0.0004957 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002858 0.0003046 0.0003502 0.01% DistributionMapping::LeastUsedCPUs() 1 6.846e-06 0.0001741 0.000248 0.01% Castro::clean_state() 62 0.0001455 0.0001645 0.0001832 0.01% Castro::enforce_consistent_e() 1 7.808e-05 0.0001042 0.0001472 0.00% Castro::finalize_advance() 10 8.467e-05 0.0001089 0.0001234 0.00% StateDataPhysBCFunct::() 41 8.216e-05 9.092e-05 9.939e-05 0.00% Castro::Castro() 1 5.08e-05 6.521e-05 8.307e-05 0.00% FabArray::ParallelCopy() 41 6.381e-05 7.184e-05 8.197e-05 0.00% Castro::construct_old_source() 50 5.798e-05 6.969e-05 8.084e-05 0.00% Amr::FinalizeInit() 1 4.334e-06 1.421e-05 7.719e-05 0.00% Castro::do_new_sources() 10 6.489e-05 6.755e-05 7.684e-05 0.00% FillPatchSingleLevel 41 6.355e-05 6.909e-05 7.395e-05 0.00% Castro::do_old_sources() 10 5.959e-05 6.439e-05 7.194e-05 0.00% Amr::writeSmallPlotFile() 1 2.654e-05 5.202e-05 7.165e-05 0.00% FabArrayBase::getCPC() 41 4.01e-05 5.7e-05 6.837e-05 0.00% Castro::advance() 10 3.836e-05 4.802e-05 6.362e-05 0.00% Castro::apply_source_to_state() 20 3.878e-05 4.601e-05 5.691e-05 0.00% Castro::subcycle_advance_ctu() 10 4.044e-05 4.53e-05 5.344e-05 0.00% Castro::construct_new_gravity() 10 3.491e-05 4.295e-05 5.039e-05 0.00% Castro::construct_old_gravity() 10 3.327e-05 3.852e-05 4.404e-05 0.00% Castro::enforce_speed_limit() 62 2.355e-05 2.817e-05 3.337e-05 0.00% Amr::defBaseLevel() 1 2.038e-05 2.649e-05 3.231e-05 0.00% FabArrayBase::CPC::define() 2 2.232e-05 2.649e-05 3.167e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.917e-05 2.578e-05 2.978e-05 0.00% Castro::check_for_nan() 20 2.292e-05 2.486e-05 2.69e-05 0.00% Castro::post_init() 1 2.731e-06 6.437e-06 2.642e-05 0.00% Gravity::swapTimeLevels() 10 9.789e-06 1.304e-05 2.265e-05 0.00% Castro::post_timestep() 10 1.375e-05 1.604e-05 1.909e-05 0.00% Amr::initSubcycle() 1 9.011e-06 1.146e-05 1.656e-05 0.00% Gravity::set_mass_offset() 10 9.895e-06 1.077e-05 1.248e-05 0.00% Castro::create_source_corrector() 10 8.499e-06 9.912e-06 1.183e-05 0.00% Castro::FluxRegCrseInit 10 8.057e-06 8.692e-06 1.004e-05 0.00% Castro::computeNewDt() 9 7.948e-06 8.643e-06 9.926e-06 0.00% Castro::retry_advance_ctu() 10 4.537e-06 5.795e-06 6.788e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.653e-06 4.573e-06 6.423e-06 0.00% Castro::post_regrid() 1 2.018e-06 3.073e-06 4.943e-06 0.00% Amr::InitializeInit() 1 2.119e-06 2.753e-06 4.797e-06 0.00% Castro::computeInitialDt() 2 3.037e-06 4.059e-06 4.788e-06 0.00% Castro::FluxRegFineAdd() 10 2.114e-06 2.66e-06 3.524e-06 0.00% Amr::init() 1 1.895e-06 2.166e-06 2.548e-06 0.00% Amr::initialInit() 1 1.209e-06 1.699e-06 2.084e-06 0.00% DistributionMapping::Distribute() 1 9.05e-07 1.106e-06 1.431e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.581 3.581 3.582 100.00% Amr::coarseTimeStep() 10 3.37 3.37 3.37 94.09% Amr::timeStep() 10 3.357 3.358 3.359 93.76% Castro::advance() 10 3.341 3.341 3.342 93.30% Castro::subcycle_advance_ctu() 10 3.259 3.267 3.276 91.45% Castro::do_advance_ctu() 10 3.259 3.267 3.276 91.45% Castro::construct_ctu_hydro_source() 10 2.263 2.349 2.45 68.40% Gravity::make_radial_gravity() 21 0.3368 0.3429 0.3546 9.90% Gravity::get_new_grav_vector() 11 0.218 0.2195 0.2209 6.17% Castro::construct_old_gravity() 10 0.1994 0.2049 0.2149 6.00% Gravity::get_old_grav_vector() 10 0.1987 0.2042 0.2143 5.98% Amr::init() 1 0.1937 0.1939 0.1939 5.41% Castro::construct_new_gravity() 10 0.1923 0.193 0.1937 5.41% FillPatchIterator::Initialize 41 0.1591 0.1712 0.1919 5.36% Amr::initialInit() 1 0.1779 0.1781 0.1783 4.98% Castro::initialize_do_advance() 10 0.1593 0.1659 0.1733 4.84% FillPatchSingleLevel 41 0.1159 0.1263 0.1526 4.26% Amr::InitializeInit() 1 0.06007 0.1112 0.1478 4.13% Amr::defBaseLevel() 1 0.06007 0.1112 0.1478 4.13% Castro::initData() 1 0.04289 0.09227 0.1306 3.65% Castro::estTimeStep() 21 0.03263 0.07193 0.1304 3.64% Castro::expand_state() 10 0.1093 0.118 0.1288 3.59% Castro::clean_state() 62 0.1132 0.1179 0.1244 3.47% Amr::FinalizeInit() 1 0.03027 0.06691 0.1179 3.29% FabArray::ParallelCopy() 41 0.08003 0.09056 0.1152 3.22% Castro::computeInitialDt() 2 0.00222 0.03877 0.09 2.51% Castro::do_new_sources() 10 0.05924 0.06697 0.07992 2.23% Castro::initialize_advance() 10 0.06103 0.07043 0.07907 2.21% FabArray::setVal() 143 0.06098 0.06761 0.07729 2.16% FabArray::ParallelCopy_finish() 41 0.03812 0.04903 0.07684 2.15% amrex::Copy() 193 0.0594 0.06889 0.07585 2.12% Castro::computeTemp() 63 0.0653 0.07046 0.07565 2.11% Castro::reset_internal_energy(MultiFab) 63 0.04744 0.05057 0.05399 1.51% Castro::reset_internal_energy(Fab) 1008 0.04716 0.05026 0.05364 1.50% Castro::do_old_sources() 10 0.0407 0.045 0.04611 1.29% Castro::normalize_species() 62 0.04125 0.04236 0.04388 1.23% FabArray::ParallelCopy_nowait() 41 0.03826 0.04146 0.04258 1.19% Castro::construct_new_source() 50 0.02905 0.03286 0.03998 1.12% StateDataPhysBCFunct::() 41 0.03248 0.03571 0.03888 1.09% StateData::FillBoundary(geom) 41 0.03239 0.03562 0.03879 1.08% Castro::construct_new_gravity_source() 10 0.02321 0.02667 0.03338 0.93% Gravity::interpolate_monopole_grav() 21 0.02774 0.02805 0.02847 0.79% Castro::post_init() 1 0.02727 0.02756 0.02778 0.78% Amr::writePlotFile() 2 0.02597 0.02616 0.02637 0.74% Castro::post_timestep() 10 0.01539 0.01609 0.01691 0.47% VisMF::Write(FabArray) 2 0.01324 0.01395 0.01658 0.46% Castro::Castro() 1 0.01089 0.01208 0.01495 0.42% Castro::apply_source_to_state() 20 0.01266 0.01386 0.01483 0.41% FabArray::Saxpy() 20 0.01263 0.01381 0.01477 0.41% Castro::check_for_nan() 20 0.01121 0.01223 0.01291 0.36% MultiFab::contains_nan() 20 0.01118 0.0122 0.01288 0.36% FabArray::setDomainBndry() 41 0.00884 0.01118 0.01241 0.35% Castro::construct_old_source() 50 0.007756 0.01025 0.0109 0.30% Castro::construct_old_gravity_source() 10 0.007695 0.01018 0.01082 0.30% Castro::initMFs() 1 0.00701 0.008118 0.01067 0.30% Castro::computeNewDt() 9 0.008983 0.009002 0.009021 0.25% AmrLevel::AmrLevel(dm) 1 0.005822 0.006658 0.00857 0.24% StateData::define() 4 0.005795 0.006633 0.008544 0.24% Castro::enforce_min_density() 62 0.005881 0.006084 0.006376 0.18% Castro::swap_state_time_levels() 10 0.003387 0.004472 0.004836 0.14% Castro::finalize_advance() 10 0.002959 0.003398 0.003867 0.11% Castro::buildMetrics() 1 0.001762 0.002036 0.002674 0.07% Castro::finalize_do_advance() 10 0.0007969 0.001694 0.002139 0.06% Castro::post_regrid() 1 0.001518 0.001642 0.001851 0.05% Amr::InitAmr() 1 0.0003012 0.0003712 0.0005122 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.266e-05 0.0001797 0.0002555 0.01% DistributionMapping::LeastUsedCPUs() 1 6.846e-06 0.0001741 0.000248 0.01% Castro::enforce_consistent_e() 1 7.808e-05 0.0001042 0.0001472 0.00% FabArrayBase::getCPC() 41 7.034e-05 8.349e-05 9.478e-05 0.00% Amr::writeSmallPlotFile() 1 2.654e-05 5.202e-05 7.165e-05 0.00% Castro::enforce_speed_limit() 62 2.355e-05 2.817e-05 3.337e-05 0.00% FabArrayBase::CPC::define() 2 2.232e-05 2.649e-05 3.167e-05 0.00% Gravity::swapTimeLevels() 10 9.789e-06 1.304e-05 2.265e-05 0.00% Amr::initSubcycle() 1 9.011e-06 1.146e-05 1.656e-05 0.00% Gravity::set_mass_offset() 10 9.895e-06 1.077e-05 1.248e-05 0.00% Castro::create_source_corrector() 10 8.499e-06 9.912e-06 1.183e-05 0.00% Castro::FluxRegCrseInit 10 8.057e-06 8.692e-06 1.004e-05 0.00% Castro::retry_advance_ctu() 10 4.537e-06 5.795e-06 6.788e-06 0.00% Castro::FluxRegFineAdd() 10 2.114e-06 2.66e-06 3.524e-06 0.00% DistributionMapping::Distribute() 1 9.05e-07 1.106e-06 1.431e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 35 B 46 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (23.03-30-gd781598bc94b) finalized