MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.03-30-gd781598bc94b) initialized Starting run at 05:36:47 UTC on 2023-03-31. Successfully read inputs file ... Castro git describe: 23.03-19-gf4ff573dd AMReX git describe: 23.03-30-gd781598bc Microphysics git describe: 23.03-24-g6e65f17a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.020270772 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.360528716 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.347183456 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.333239463 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.336213829 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354881236 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.339596858 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.311524083 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.30992206 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.310343607 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.310366037 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010922015 seconds Ending run at 05:36:51 UTC on 2023-03-31. Run time = 3.528255638 Run time without initialization = 3.332219275 Average number of zones advanced per microsecond: 0.787 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.527 ... 3.528 ... 3.528 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2955 2.3564 2.3846 67.58% Gravity::make_radial_gravity() 21 0.3267 0.3366 0.3477 9.86% Castro::do_advance_ctu() 10 0.02076 0.05042 0.1163 3.30% Castro::estTimeStep() 21 0.02615 0.05759 0.1142 3.24% Castro::initData() 1 0.03854 0.08555 0.1116 3.16% FabArray::setVal() 143 0.06631 0.075 0.08731 2.47% amrex::Copy() 193 0.0633 0.07125 0.07875 2.23% FabArray::ParallelCopy_finish() 41 0.03779 0.05508 0.06548 1.86% Castro::reset_internal_energy(Fab) 1008 0.04786 0.05049 0.05322 1.51% FabArray::ParallelCopy_nowait() 41 0.03695 0.04177 0.04391 1.24% Castro::normalize_species() 62 0.04144 0.04256 0.04329 1.23% StateData::FillBoundary(geom) 41 0.03232 0.03519 0.04006 1.14% FillPatchIterator::Initialize 41 0.03027 0.03423 0.03757 1.06% Castro::construct_new_gravity_source() 10 0.02306 0.02673 0.03138 0.89% Gravity::interpolate_monopole_grav() 21 0.02799 0.02848 0.02978 0.84% Castro::computeTemp() 63 0.0196 0.02043 0.02185 0.62% Castro::initialize_do_advance() 10 0.01286 0.01812 0.02076 0.59% VisMF::Write(FabArray) 2 0.01394 0.01507 0.01959 0.56% FabArray::Saxpy() 20 0.01419 0.01468 0.01577 0.45% Castro::initialize_advance() 10 0.009706 0.01207 0.01461 0.41% Amr::writePlotFile() 2 0.009216 0.01215 0.01393 0.39% MultiFab::contains_nan() 20 0.0117 0.0125 0.0134 0.38% FabArray::setDomainBndry() 41 0.009215 0.01147 0.01312 0.37% Castro::construct_old_gravity_source() 10 0.00755 0.0103 0.01098 0.31% Castro::initMFs() 1 0.006989 0.007981 0.01093 0.31% StateData::define() 4 0.005759 0.006451 0.008415 0.24% main() 1 0.005461 0.006345 0.006737 0.19% Castro::construct_new_source() 50 0.005899 0.006298 0.006575 0.19% Castro::enforce_min_density() 62 0.005845 0.006067 0.006433 0.18% Castro::swap_state_time_levels() 10 0.003523 0.004803 0.005271 0.15% Gravity::get_new_grav_vector() 11 0.003309 0.004083 0.00472 0.13% Amr::coarseTimeStep() 10 0.001231 0.002457 0.003601 0.10% Gravity::get_old_grav_vector() 10 0.001885 0.00237 0.002752 0.08% Castro::buildMetrics() 1 0.001636 0.001843 0.002422 0.07% Castro::finalize_do_advance() 10 0.0006443 0.001581 0.001952 0.06% Castro::expand_state() 10 0.0007921 0.001001 0.001114 0.03% Amr::InitAmr() 1 0.0002768 0.0003538 0.0005104 0.01% Amr::timeStep() 10 0.0001752 0.0002205 0.0003769 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002724 0.0003015 0.0003548 0.01% DistributionMapping::LeastUsedCPUs() 1 6.026e-06 0.0001917 0.0002758 0.01% Castro::clean_state() 62 0.0001456 0.0001557 0.0001705 0.00% Castro::finalize_advance() 10 8.52e-05 0.0001081 0.0001343 0.00% Castro::enforce_consistent_e() 1 7.863e-05 9.781e-05 0.0001289 0.00% StateDataPhysBCFunct::() 41 8.827e-05 9.543e-05 0.0001157 0.00% Castro::construct_old_source() 50 5.668e-05 6.969e-05 8.225e-05 0.00% Castro::do_old_sources() 10 4.972e-05 6.372e-05 7.98e-05 0.00% Castro::do_new_sources() 10 5.386e-05 6.416e-05 7.769e-05 0.00% FabArray::ParallelCopy() 41 6.375e-05 7.161e-05 7.667e-05 0.00% Castro::Castro() 1 5.879e-05 6.435e-05 7.452e-05 0.00% Amr::FinalizeInit() 1 4.794e-06 1.455e-05 7.362e-05 0.00% FabArrayBase::getCPC() 41 4.35e-05 5.778e-05 7.089e-05 0.00% FillPatchSingleLevel 41 6.259e-05 6.644e-05 7.002e-05 0.00% Amr::writeSmallPlotFile() 1 2.506e-05 5.053e-05 6.276e-05 0.00% Castro::apply_source_to_state() 20 4.255e-05 4.667e-05 5.493e-05 0.00% Castro::subcycle_advance_ctu() 10 3.617e-05 4.33e-05 5.392e-05 0.00% Castro::advance() 10 3.818e-05 4.147e-05 4.633e-05 0.00% Castro::construct_old_gravity() 10 3.531e-05 3.943e-05 4.584e-05 0.00% Castro::construct_new_gravity() 10 3.502e-05 3.727e-05 4.053e-05 0.00% FabArrayBase::CPC::define() 2 2.172e-05 2.74e-05 3.603e-05 0.00% Amr::defBaseLevel() 1 2.68e-05 3.221e-05 3.578e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.326e-05 2.883e-05 3.536e-05 0.00% Castro::check_for_nan() 20 2.121e-05 2.492e-05 3.082e-05 0.00% Castro::enforce_speed_limit() 62 2.353e-05 2.63e-05 2.887e-05 0.00% Castro::post_timestep() 10 1.356e-05 1.534e-05 2.035e-05 0.00% Gravity::set_mass_offset() 10 9.433e-06 1.157e-05 1.876e-05 0.00% Gravity::swapTimeLevels() 10 1.19e-05 1.399e-05 1.701e-05 0.00% Amr::initSubcycle() 1 8.955e-06 1.107e-05 1.659e-05 0.00% Castro::FluxRegCrseInit 10 7.867e-06 9.778e-06 1.358e-05 0.00% Castro::create_source_corrector() 10 7.238e-06 9.956e-06 1.218e-05 0.00% Castro::post_init() 1 2.491e-06 5.147e-06 9.971e-06 0.00% Castro::computeNewDt() 9 7.198e-06 8.157e-06 9.092e-06 0.00% Amr::init() 1 2.112e-06 3.891e-06 8.864e-06 0.00% Castro::computeInitialDt() 2 3.43e-06 4.88e-06 7.378e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.892e-06 5.478e-06 7.092e-06 0.00% Castro::retry_advance_ctu() 10 5.192e-06 5.406e-06 5.536e-06 0.00% Castro::post_regrid() 1 2.585e-06 3.443e-06 4.754e-06 0.00% Amr::InitializeInit() 1 2.062e-06 2.749e-06 4.667e-06 0.00% Castro::FluxRegFineAdd() 10 1.993e-06 2.526e-06 3.437e-06 0.00% Amr::initialInit() 1 1.363e-06 1.72e-06 2.077e-06 0.00% DistributionMapping::Distribute() 1 8.28e-07 1.126e-06 1.625e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.527 3.528 3.528 100.00% Amr::coarseTimeStep() 10 3.315 3.315 3.315 93.94% Amr::timeStep() 10 3.301 3.302 3.303 93.62% Castro::advance() 10 3.285 3.286 3.287 93.15% Castro::subcycle_advance_ctu() 10 3.196 3.204 3.211 91.00% Castro::do_advance_ctu() 10 3.196 3.204 3.211 91.00% Castro::construct_ctu_hydro_source() 10 2.296 2.356 2.385 67.58% Gravity::make_radial_gravity() 21 0.3421 0.3529 0.3624 10.27% Gravity::get_new_grav_vector() 11 0.231 0.2386 0.2418 6.85% Castro::construct_old_gravity() 10 0.1917 0.2011 0.2082 5.90% Gravity::get_old_grav_vector() 10 0.1906 0.2003 0.2076 5.88% Castro::construct_new_gravity() 10 0.1936 0.1993 0.2013 5.70% Amr::init() 1 0.1953 0.1955 0.1956 5.54% FillPatchIterator::Initialize 41 0.1616 0.1781 0.192 5.44% Castro::initialize_do_advance() 10 0.1549 0.17 0.1821 5.16% Amr::initialInit() 1 0.175 0.1767 0.1772 5.02% FillPatchSingleLevel 41 0.1209 0.1324 0.1434 4.07% Castro::expand_state() 10 0.1089 0.1216 0.1336 3.79% Amr::InitializeInit() 1 0.05982 0.1092 0.1333 3.78% Amr::defBaseLevel() 1 0.05982 0.1092 0.1333 3.78% Castro::clean_state() 62 0.1158 0.1189 0.1233 3.49% Amr::FinalizeInit() 1 0.04388 0.06752 0.1173 3.32% Castro::initData() 1 0.04244 0.09022 0.1158 3.28% Castro::estTimeStep() 21 0.02615 0.05759 0.1142 3.24% FabArray::ParallelCopy() 41 0.08184 0.09701 0.1056 2.99% FabArray::setVal() 143 0.06631 0.075 0.08731 2.47% Castro::initialize_advance() 10 0.07128 0.07845 0.0866 2.45% Castro::do_new_sources() 10 0.06046 0.06807 0.07877 2.23% amrex::Copy() 193 0.0633 0.07125 0.07875 2.23% Castro::computeInitialDt() 2 0.003032 0.02704 0.07649 2.17% Castro::computeTemp() 63 0.06776 0.07122 0.07495 2.12% FabArray::ParallelCopy_finish() 41 0.03779 0.05508 0.06548 1.86% Castro::reset_internal_energy(MultiFab) 63 0.04814 0.05079 0.05353 1.52% Castro::reset_internal_energy(Fab) 1008 0.04786 0.05049 0.05322 1.51% Castro::do_old_sources() 10 0.0427 0.04604 0.04701 1.33% FabArray::ParallelCopy_nowait() 41 0.03706 0.04186 0.04398 1.25% Castro::normalize_species() 62 0.04144 0.04256 0.04329 1.23% Castro::post_init() 1 0.03893 0.04029 0.04107 1.16% StateDataPhysBCFunct::() 41 0.03242 0.03528 0.04015 1.14% StateData::FillBoundary(geom) 41 0.03232 0.03519 0.04006 1.14% Castro::construct_new_source() 50 0.02933 0.03302 0.03786 1.07% Amr::writePlotFile() 2 0.02915 0.02985 0.03145 0.89% Castro::construct_new_gravity_source() 10 0.02306 0.02673 0.03138 0.89% Gravity::interpolate_monopole_grav() 21 0.02799 0.02848 0.02978 0.84% VisMF::Write(FabArray) 2 0.01394 0.01507 0.01959 0.56% Castro::post_timestep() 10 0.01553 0.01596 0.01626 0.46% Castro::apply_source_to_state() 20 0.01423 0.01472 0.01582 0.45% FabArray::Saxpy() 20 0.01419 0.01468 0.01577 0.45% Castro::Castro() 1 0.01125 0.01224 0.01517 0.43% Castro::check_for_nan() 20 0.01173 0.01253 0.01342 0.38% MultiFab::contains_nan() 20 0.0117 0.0125 0.0134 0.38% FabArray::setDomainBndry() 41 0.009215 0.01147 0.01312 0.37% Castro::construct_old_source() 50 0.007606 0.01036 0.01104 0.31% Castro::construct_old_gravity_source() 10 0.00755 0.0103 0.01098 0.31% Castro::initMFs() 1 0.006989 0.007981 0.01093 0.31% Castro::computeNewDt() 9 0.008418 0.008431 0.008451 0.24% AmrLevel::AmrLevel(dm) 1 0.005782 0.00648 0.008448 0.24% StateData::define() 4 0.005759 0.006451 0.008415 0.24% Castro::enforce_min_density() 62 0.005845 0.006067 0.006433 0.18% Castro::swap_state_time_levels() 10 0.003523 0.004803 0.005271 0.15% Castro::finalize_advance() 10 0.002989 0.003696 0.004507 0.13% Castro::post_regrid() 1 0.001519 0.001918 0.002983 0.08% Castro::buildMetrics() 1 0.001761 0.001993 0.002639 0.07% Castro::finalize_do_advance() 10 0.0006443 0.001581 0.001952 0.06% Amr::InitAmr() 1 0.0002863 0.0003649 0.000527 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.181e-05 0.0001983 0.0002829 0.01% DistributionMapping::LeastUsedCPUs() 1 6.026e-06 0.0001917 0.0002758 0.01% Castro::enforce_consistent_e() 1 7.863e-05 9.781e-05 0.0001289 0.00% FabArrayBase::getCPC() 41 6.755e-05 8.519e-05 0.0001042 0.00% Amr::writeSmallPlotFile() 1 2.506e-05 5.053e-05 6.276e-05 0.00% FabArrayBase::CPC::define() 2 2.172e-05 2.74e-05 3.603e-05 0.00% Castro::enforce_speed_limit() 62 2.353e-05 2.63e-05 2.887e-05 0.00% Gravity::set_mass_offset() 10 9.433e-06 1.157e-05 1.876e-05 0.00% Gravity::swapTimeLevels() 10 1.19e-05 1.399e-05 1.701e-05 0.00% Amr::initSubcycle() 1 8.955e-06 1.107e-05 1.659e-05 0.00% Castro::FluxRegCrseInit 10 7.867e-06 9.778e-06 1.358e-05 0.00% Castro::create_source_corrector() 10 7.238e-06 9.956e-06 1.218e-05 0.00% Castro::retry_advance_ctu() 10 5.192e-06 5.406e-06 5.536e-06 0.00% Castro::FluxRegFineAdd() 10 1.993e-06 2.526e-06 3.437e-06 0.00% DistributionMapping::Distribute() 1 8.28e-07 1.126e-06 1.625e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 29 B 35 B 43 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (23.03-30-gd781598bc94b) finalized