MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.04-8-gbacaa10a7636) initialized Starting run at 22:55:19 UTC on 2023-04-03. Successfully read inputs file ... Castro git describe: 23.04-1-g68c92753d AMReX git describe: 23.04-8-gbacaa10a7 Microphysics git describe: 23.04 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.016693141 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.355565977 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.357373232 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.332868996 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.334438634 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.36126414 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33247167 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.314609128 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.314436 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.314882389 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.315416969 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010596621 seconds Ending run at 22:55:23 UTC on 2023-04-03. Run time = 3.587196504 Run time without initialization = 3.351495608 Average number of zones advanced per microsecond: 0.782 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.586 ... 3.587 ... 3.587 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2951 2.3470 2.4353 67.89% Gravity::make_radial_gravity() 21 0.3147 0.3271 0.347 9.67% Castro::estTimeStep() 21 0.02097 0.1064 0.1599 4.46% Castro::do_advance_ctu() 10 0.01145 0.1033 0.1596 4.45% Castro::initData() 1 0.03855 0.0874 0.1583 4.41% FabArray::setVal() 143 0.05669 0.06728 0.079 2.20% FabArray::ParallelCopy_finish() 41 0.03488 0.04778 0.07884 2.20% amrex::Copy() 193 0.05766 0.07123 0.07865 2.19% Castro::reset_internal_energy(Fab) 1008 0.0488 0.05023 0.05278 1.47% Castro::normalize_species() 62 0.04105 0.04225 0.0436 1.22% FabArray::ParallelCopy_nowait() 41 0.03683 0.04155 0.04309 1.20% StateData::FillBoundary(geom) 41 0.03217 0.03491 0.03789 1.06% FillPatchIterator::Initialize 41 0.02913 0.0331 0.03546 0.99% Castro::construct_new_gravity_source() 10 0.02324 0.02591 0.02967 0.83% Gravity::interpolate_monopole_grav() 21 0.02795 0.02846 0.02919 0.81% Castro::computeTemp() 63 0.01976 0.02011 0.02061 0.57% Castro::initialize_do_advance() 10 0.01273 0.01698 0.01942 0.54% VisMF::Write(FabArray) 2 0.01415 0.01489 0.01826 0.51% FabArray::Saxpy() 20 0.01239 0.01385 0.01497 0.42% Castro::initialize_advance() 10 0.004116 0.01009 0.01334 0.37% MultiFab::contains_nan() 20 0.01116 0.01209 0.01287 0.36% FabArray::setDomainBndry() 41 0.008916 0.01116 0.01245 0.35% Castro::construct_old_gravity_source() 10 0.007522 0.01023 0.01094 0.30% Amr::writePlotFile() 2 0.00731 0.009971 0.01061 0.30% Castro::initMFs() 1 0.007 0.008311 0.01041 0.29% StateData::define() 4 0.005832 0.00715 0.00849 0.24% main() 1 0.005966 0.006548 0.006886 0.19% Castro::enforce_min_density() 62 0.005889 0.006105 0.006521 0.18% Castro::construct_new_source() 50 0.005599 0.006172 0.006465 0.18% Gravity::get_new_grav_vector() 11 0.003086 0.003845 0.005365 0.15% Castro::swap_state_time_levels() 10 0.002713 0.00449 0.00476 0.13% Gravity::get_old_grav_vector() 10 0.001635 0.002384 0.002929 0.08% Castro::buildMetrics() 1 0.001639 0.002042 0.002456 0.07% Amr::coarseTimeStep() 10 0.001053 0.001732 0.002146 0.06% Castro::finalize_do_advance() 10 0.0006497 0.001469 0.001664 0.05% Castro::expand_state() 10 0.0006878 0.0008574 0.0009896 0.03% Amr::InitAmr() 1 0.0002911 0.0004264 0.0005295 0.01% Amr::timeStep() 10 0.0001694 0.0002338 0.0003874 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002728 0.0002904 0.0003147 0.01% DistributionMapping::LeastUsedCPUs() 1 7.088e-06 0.0001224 0.0002732 0.01% Castro::clean_state() 62 0.0001433 0.0001683 0.0001991 0.01% Castro::finalize_advance() 10 9.077e-05 0.0001084 0.0001444 0.00% Castro::enforce_consistent_e() 1 7.407e-05 9.627e-05 0.0001443 0.00% StateDataPhysBCFunct::() 41 8.706e-05 9.237e-05 9.97e-05 0.00% Amr::FinalizeInit() 1 3.145e-06 1.497e-05 8.786e-05 0.00% Castro::construct_old_source() 50 4.773e-05 6.73e-05 8.371e-05 0.00% Castro::Castro() 1 4.978e-05 6.241e-05 7.67e-05 0.00% FabArray::ParallelCopy() 41 6.649e-05 6.94e-05 7.355e-05 0.00% FillPatchSingleLevel 41 6.201e-05 6.651e-05 7.149e-05 0.00% Castro::do_new_sources() 10 5.217e-05 6.067e-05 7.138e-05 0.00% Amr::writeSmallPlotFile() 1 2.558e-05 5.647e-05 7.074e-05 0.00% Castro::do_old_sources() 10 5.154e-05 6.057e-05 7.062e-05 0.00% FabArrayBase::getCPC() 41 5.148e-05 6.042e-05 6.771e-05 0.00% Castro::subcycle_advance_ctu() 10 3.958e-05 4.873e-05 5.796e-05 0.00% Castro::apply_source_to_state() 20 4.139e-05 4.848e-05 5.743e-05 0.00% Castro::construct_old_gravity() 10 3.347e-05 4.105e-05 5.096e-05 0.00% Castro::construct_new_gravity() 10 3.635e-05 4.215e-05 5.02e-05 0.00% Castro::advance() 10 3.698e-05 4.404e-05 4.993e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.715e-05 2.967e-05 4.285e-05 0.00% Amr::defBaseLevel() 1 1.776e-05 2.566e-05 3.684e-05 0.00% Castro::enforce_speed_limit() 62 2.441e-05 2.844e-05 3.309e-05 0.00% Castro::check_for_nan() 20 2.334e-05 2.592e-05 2.818e-05 0.00% FabArrayBase::CPC::define() 2 2.034e-05 2.367e-05 2.684e-05 0.00% Castro::post_timestep() 10 1.411e-05 1.587e-05 1.867e-05 0.00% Amr::initSubcycle() 1 8.991e-06 1.274e-05 1.641e-05 0.00% Gravity::swapTimeLevels() 10 9.489e-06 1.208e-05 1.625e-05 0.00% Gravity::set_mass_offset() 10 9.968e-06 1.109e-05 1.302e-05 0.00% Castro::FluxRegCrseInit 10 8.74e-06 9.777e-06 1.131e-05 0.00% Castro::create_source_corrector() 10 8.432e-06 9.436e-06 1.006e-05 0.00% Castro::post_init() 1 3.071e-06 4.48e-06 9.919e-06 0.00% Castro::computeNewDt() 9 7.409e-06 8.005e-06 9.278e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.823e-06 5.144e-06 7.366e-06 0.00% Castro::post_regrid() 1 2.018e-06 3.663e-06 7.093e-06 0.00% Castro::computeInitialDt() 2 3.961e-06 4.776e-06 6.164e-06 0.00% Castro::retry_advance_ctu() 10 4.775e-06 5.583e-06 6.048e-06 0.00% Amr::InitializeInit() 1 1.891e-06 2.84e-06 5.136e-06 0.00% Castro::FluxRegFineAdd() 10 2.025e-06 2.401e-06 2.831e-06 0.00% Amr::init() 1 1.952e-06 2.208e-06 2.516e-06 0.00% Amr::initialInit() 1 1.498e-06 1.804e-06 2.357e-06 0.00% DistributionMapping::Distribute() 1 1.035e-06 1.234e-06 1.42e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.586 3.587 3.587 100.00% Amr::coarseTimeStep() 10 3.334 3.334 3.334 92.94% Amr::timeStep() 10 3.322 3.323 3.323 92.64% Castro::advance() 10 3.306 3.307 3.307 92.19% Castro::subcycle_advance_ctu() 10 3.226 3.233 3.247 90.51% Castro::do_advance_ctu() 10 3.226 3.233 3.247 90.51% Castro::construct_ctu_hydro_source() 10 2.295 2.347 2.435 67.89% Gravity::make_radial_gravity() 21 0.3294 0.3435 0.3608 10.06% Amr::init() 1 0.235 0.2351 0.2353 6.56% Gravity::get_new_grav_vector() 11 0.2234 0.2255 0.2274 6.34% Amr::initialInit() 1 0.2179 0.2182 0.2185 6.09% Castro::construct_old_gravity() 10 0.1909 0.1996 0.2141 5.97% Gravity::get_old_grav_vector() 10 0.1901 0.1989 0.2135 5.95% Castro::construct_new_gravity() 10 0.1975 0.1987 0.1998 5.57% Amr::InitializeInit() 1 0.05914 0.1111 0.1873 5.22% Amr::defBaseLevel() 1 0.05914 0.1111 0.1872 5.22% FillPatchIterator::Initialize 41 0.1532 0.1688 0.1864 5.20% Castro::initialize_do_advance() 10 0.1541 0.1642 0.1695 4.73% Castro::initData() 1 0.04228 0.09157 0.164 4.57% Castro::estTimeStep() 21 0.02097 0.1064 0.1599 4.46% Amr::FinalizeInit() 1 0.03066 0.1072 0.1591 4.44% FillPatchSingleLevel 41 0.1134 0.1245 0.1484 4.14% Castro::computeInitialDt() 2 0.002293 0.07861 0.1307 3.64% Castro::expand_state() 10 0.105 0.1171 0.124 3.46% Castro::clean_state() 62 0.1164 0.1181 0.1224 3.41% FabArray::ParallelCopy() 41 0.07812 0.08948 0.1158 3.23% FabArray::setVal() 143 0.05669 0.06728 0.079 2.20% FabArray::ParallelCopy_finish() 41 0.03488 0.04778 0.07884 2.20% amrex::Copy() 193 0.05766 0.07123 0.07865 2.19% Castro::initialize_advance() 10 0.05517 0.07026 0.07692 2.14% Castro::do_new_sources() 10 0.06057 0.06635 0.07554 2.11% Castro::computeTemp() 63 0.06885 0.07063 0.0736 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04909 0.05053 0.0531 1.48% Castro::reset_internal_energy(Fab) 1008 0.0488 0.05023 0.05278 1.47% Castro::do_old_sources() 10 0.03994 0.04532 0.04658 1.30% Castro::normalize_species() 62 0.04105 0.04225 0.0436 1.22% FabArray::ParallelCopy_nowait() 41 0.03691 0.04163 0.04317 1.20% StateDataPhysBCFunct::() 41 0.03226 0.03501 0.03798 1.06% StateData::FillBoundary(geom) 41 0.03217 0.03491 0.03789 1.06% Castro::construct_new_source() 50 0.02943 0.03208 0.03614 1.01% Castro::construct_new_gravity_source() 10 0.02324 0.02591 0.02967 0.83% Gravity::interpolate_monopole_grav() 21 0.02795 0.02846 0.02919 0.81% Castro::post_init() 1 0.0276 0.02799 0.02826 0.79% Amr::writePlotFile() 2 0.0274 0.02754 0.02773 0.77% VisMF::Write(FabArray) 2 0.01415 0.01489 0.01826 0.51% Castro::post_timestep() 10 0.01572 0.0159 0.01614 0.45% Castro::apply_source_to_state() 20 0.01244 0.0139 0.01501 0.42% FabArray::Saxpy() 20 0.01239 0.01385 0.01497 0.42% Castro::Castro() 1 0.01068 0.01214 0.01471 0.41% Castro::check_for_nan() 20 0.01118 0.01212 0.0129 0.36% MultiFab::contains_nan() 20 0.01116 0.01209 0.01287 0.36% FabArray::setDomainBndry() 41 0.008916 0.01116 0.01245 0.35% Castro::construct_old_source() 50 0.00757 0.01029 0.011 0.31% Castro::construct_old_gravity_source() 10 0.007522 0.01023 0.01094 0.30% Castro::initMFs() 1 0.007 0.008311 0.01041 0.29% AmrLevel::AmrLevel(dm) 1 0.005849 0.007179 0.008533 0.24% StateData::define() 4 0.005832 0.00715 0.00849 0.24% Castro::computeNewDt() 9 0.008464 0.008474 0.008479 0.24% Castro::enforce_min_density() 62 0.005889 0.006105 0.006521 0.18% Castro::swap_state_time_levels() 10 0.002713 0.00449 0.00476 0.13% Castro::finalize_advance() 10 0.003089 0.003578 0.004006 0.11% Castro::buildMetrics() 1 0.001754 0.002205 0.002672 0.07% Castro::post_regrid() 1 0.001588 0.001705 0.002028 0.06% Castro::finalize_do_advance() 10 0.0006497 0.001469 0.001664 0.05% Amr::InitAmr() 1 0.000301 0.0004391 0.0005457 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.218e-05 0.0001288 0.0002811 0.01% DistributionMapping::LeastUsedCPUs() 1 7.088e-06 0.0001224 0.0002732 0.01% Castro::enforce_consistent_e() 1 7.407e-05 9.627e-05 0.0001443 0.00% FabArrayBase::getCPC() 41 7.47e-05 8.41e-05 9.165e-05 0.00% Amr::writeSmallPlotFile() 1 2.558e-05 5.647e-05 7.074e-05 0.00% Castro::enforce_speed_limit() 62 2.441e-05 2.844e-05 3.309e-05 0.00% FabArrayBase::CPC::define() 2 2.034e-05 2.367e-05 2.684e-05 0.00% Amr::initSubcycle() 1 8.991e-06 1.274e-05 1.641e-05 0.00% Gravity::swapTimeLevels() 10 9.489e-06 1.208e-05 1.625e-05 0.00% Gravity::set_mass_offset() 10 9.968e-06 1.109e-05 1.302e-05 0.00% Castro::FluxRegCrseInit 10 8.74e-06 9.777e-06 1.131e-05 0.00% Castro::create_source_corrector() 10 8.432e-06 9.436e-06 1.006e-05 0.00% Castro::retry_advance_ctu() 10 4.775e-06 5.583e-06 6.048e-06 0.00% Castro::FluxRegFineAdd() 10 2.025e-06 2.401e-06 2.831e-06 0.00% DistributionMapping::Distribute() 1 1.035e-06 1.234e-06 1.42e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 36 B 43 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (23.04-8-gbacaa10a7636) finalized