MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (23.04-8-gbacaa10a7636) initialized Starting run at 05:31:15 UTC on 2023-04-04. Successfully read inputs file ... Castro git describe: 23.04-1-g68c92753d AMReX git describe: 23.04-8-gbacaa10a7 Microphysics git describe: 23.04 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01632326 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.379814703 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.386958697 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.360598208 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.329251382 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.360070441 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.324753731 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.31424839 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.311959691 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.310418869 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.30920844 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010463084 seconds Ending run at 05:31:18 UTC on 2023-04-04. Run time = 3.612273572 Run time without initialization = 3.405049559 Average number of zones advanced per microsecond: 0.770 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.612 ... 3.612 ... 3.612 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.3289 2.3609 2.4253 67.14% Gravity::make_radial_gravity() 21 0.3275 0.337 0.3494 9.67% Castro::do_advance_ctu() 10 0.05865 0.1237 0.1562 4.32% Castro::estTimeStep() 21 0.02672 0.0895 0.1357 3.76% Castro::initData() 1 0.03872 0.07989 0.1345 3.72% amrex::Copy() 193 0.0608 0.07175 0.08034 2.22% FabArray::setVal() 143 0.06172 0.06668 0.07429 2.06% FabArray::ParallelCopy_finish() 41 0.03742 0.05081 0.07007 1.94% Castro::reset_internal_energy(Fab) 1008 0.04702 0.05015 0.05244 1.45% Castro::normalize_species() 62 0.04186 0.04268 0.04525 1.25% FabArray::ParallelCopy_nowait() 41 0.0374 0.0421 0.04366 1.21% StateData::FillBoundary(geom) 41 0.03339 0.03581 0.04049 1.12% FillPatchIterator::Initialize 41 0.03056 0.03473 0.03663 1.01% Castro::construct_new_gravity_source() 10 0.02301 0.02616 0.03187 0.88% Gravity::interpolate_monopole_grav() 21 0.02825 0.02869 0.02972 0.82% Castro::computeTemp() 63 0.01725 0.01959 0.02076 0.57% Castro::initialize_do_advance() 10 0.01326 0.01746 0.01891 0.52% VisMF::Write(FabArray) 2 0.0139 0.01453 0.01733 0.48% FabArray::Saxpy() 20 0.01262 0.01379 0.01472 0.41% MultiFab::contains_nan() 20 0.0111 0.01207 0.0136 0.38% Castro::initialize_advance() 10 0.005243 0.01016 0.01336 0.37% FabArray::setDomainBndry() 41 0.009002 0.01174 0.01282 0.35% Castro::construct_old_gravity_source() 10 0.007588 0.01008 0.0111 0.31% Amr::writePlotFile() 2 0.006977 0.009947 0.01065 0.29% Castro::initMFs() 1 0.007051 0.00758 0.009306 0.26% StateData::define() 4 0.005736 0.005972 0.006615 0.18% main() 1 0.005704 0.006376 0.006581 0.18% Castro::construct_new_source() 50 0.005895 0.006119 0.006387 0.18% Castro::enforce_min_density() 62 0.005901 0.006116 0.006353 0.18% Castro::swap_state_time_levels() 10 0.003372 0.004522 0.004769 0.13% Gravity::get_new_grav_vector() 11 0.003195 0.003712 0.004177 0.12% Amr::coarseTimeStep() 10 0.001508 0.002438 0.003085 0.09% Gravity::get_old_grav_vector() 10 0.001897 0.002445 0.002844 0.08% Castro::finalize_do_advance() 10 0.0006908 0.001936 0.002412 0.07% Castro::buildMetrics() 1 0.001632 0.001712 0.001907 0.05% Castro::expand_state() 10 0.0006964 0.0008847 0.001153 0.03% Amr::timeStep() 10 0.0001761 0.0002361 0.0004983 0.01% Amr::InitAmr() 1 0.0002742 0.000312 0.0004172 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002757 0.0002972 0.0003455 0.01% Castro::clean_state() 62 0.0001674 0.0001754 0.0001816 0.01% DistributionMapping::LeastUsedCPUs() 1 6.913e-06 0.0001125 0.000133 0.00% Castro::finalize_advance() 10 9.825e-05 0.0001075 0.0001195 0.00% Castro::enforce_consistent_e() 1 8.003e-05 8.924e-05 0.0001115 0.00% StateDataPhysBCFunct::() 41 8.967e-05 9.546e-05 0.0001073 0.00% FillPatchSingleLevel 41 6.123e-05 6.713e-05 7.996e-05 0.00% FabArray::ParallelCopy() 41 6.474e-05 7.094e-05 7.924e-05 0.00% FabArrayBase::getCPC() 41 4.064e-05 6.202e-05 7.751e-05 0.00% Castro::Castro() 1 5.337e-05 6.218e-05 7.654e-05 0.00% Castro::do_new_sources() 10 5.503e-05 6.463e-05 7.64e-05 0.00% Castro::do_old_sources() 10 5.571e-05 6.34e-05 7.387e-05 0.00% Castro::construct_old_source() 50 5.648e-05 6.655e-05 7.35e-05 0.00% Amr::FinalizeInit() 1 4.319e-06 1.34e-05 7.346e-05 0.00% Castro::subcycle_advance_ctu() 10 3.788e-05 4.731e-05 6.405e-05 0.00% Amr::writeSmallPlotFile() 1 2.534e-05 4.991e-05 5.847e-05 0.00% Castro::advance() 10 3.895e-05 4.616e-05 5.77e-05 0.00% Castro::apply_source_to_state() 20 4.163e-05 4.713e-05 5.354e-05 0.00% Castro::construct_new_gravity() 10 3.447e-05 4.229e-05 5.124e-05 0.00% Castro::construct_old_gravity() 10 3.594e-05 4.1e-05 4.968e-05 0.00% Amr::defBaseLevel() 1 1.777e-05 2.542e-05 3.6e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.531e-05 2.515e-05 3.594e-05 0.00% Castro::enforce_speed_limit() 62 2.68e-05 2.983e-05 3.236e-05 0.00% FabArrayBase::CPC::define() 2 2.226e-05 2.583e-05 3.092e-05 0.00% Castro::check_for_nan() 20 2.26e-05 2.497e-05 2.662e-05 0.00% Castro::post_timestep() 10 1.32e-05 1.48e-05 1.636e-05 0.00% Gravity::swapTimeLevels() 10 9.878e-06 1.239e-05 1.632e-05 0.00% Gravity::set_mass_offset() 10 1.037e-05 1.173e-05 1.262e-05 0.00% Amr::initSubcycle() 1 8.749e-06 9.637e-06 1.056e-05 0.00% Castro::FluxRegCrseInit 10 8.543e-06 9.375e-06 1.012e-05 0.00% Castro::create_source_corrector() 10 8.265e-06 9.166e-06 9.938e-06 0.00% Castro::post_init() 1 3.323e-06 4.386e-06 9.006e-06 0.00% Castro::computeNewDt() 9 7.515e-06 8.254e-06 8.91e-06 0.00% Amr::init() 1 1.872e-06 3.034e-06 7.922e-06 0.00% Castro::retry_advance_ctu() 10 4.534e-06 5.842e-06 7.035e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.407e-06 4.764e-06 6.53e-06 0.00% Amr::InitializeInit() 1 2.091e-06 2.805e-06 5.221e-06 0.00% Castro::computeInitialDt() 2 3.087e-06 3.95e-06 4.521e-06 0.00% Castro::post_regrid() 1 2.199e-06 3.058e-06 4.121e-06 0.00% Castro::FluxRegFineAdd() 10 2.049e-06 2.573e-06 3.322e-06 0.00% Amr::initialInit() 1 1.315e-06 1.558e-06 2.175e-06 0.00% DistributionMapping::Distribute() 1 8.76e-07 1.076e-06 1.42e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.611 3.612 3.612 100.00% Amr::coarseTimeStep() 10 3.388 3.388 3.388 93.79% Amr::timeStep() 10 3.375 3.375 3.376 93.46% Castro::advance() 10 3.358 3.359 3.36 93.01% Castro::subcycle_advance_ctu() 10 3.279 3.285 3.291 91.10% Castro::do_advance_ctu() 10 3.279 3.285 3.291 91.10% Castro::construct_ctu_hydro_source() 10 2.329 2.361 2.425 67.14% Gravity::make_radial_gravity() 21 0.343 0.3534 0.3633 10.06% Gravity::get_new_grav_vector() 11 0.2301 0.2323 0.2341 6.48% Castro::construct_old_gravity() 10 0.1984 0.2052 0.2154 5.96% Gravity::get_old_grav_vector() 10 0.1976 0.2044 0.2148 5.95% Amr::init() 1 0.2067 0.2068 0.2068 5.72% Castro::construct_new_gravity() 10 0.202 0.2037 0.2048 5.67% Amr::initialInit() 1 0.19 0.1901 0.1903 5.27% FillPatchIterator::Initialize 41 0.1691 0.1755 0.1829 5.06% Castro::initialize_do_advance() 10 0.1563 0.1659 0.1725 4.77% Amr::InitializeInit() 1 0.06008 0.1017 0.1577 4.37% Amr::defBaseLevel() 1 0.06008 0.1017 0.1577 4.37% FillPatchSingleLevel 41 0.1217 0.129 0.1412 3.91% Castro::initData() 1 0.04277 0.08389 0.1385 3.84% Castro::estTimeStep() 21 0.02672 0.0895 0.1357 3.76% Amr::FinalizeInit() 1 0.03229 0.08846 0.1301 3.60% Castro::expand_state() 10 0.1101 0.1183 0.1244 3.44% Castro::clean_state() 62 0.112 0.1181 0.124 3.43% FabArray::ParallelCopy() 41 0.08123 0.09307 0.1076 2.98% Castro::computeInitialDt() 2 0.002346 0.0584 0.1 2.77% amrex::Copy() 193 0.0608 0.07175 0.08034 2.22% Castro::initialize_advance() 10 0.06458 0.07029 0.07683 2.13% Castro::do_new_sources() 10 0.05977 0.06532 0.07521 2.08% FabArray::setVal() 143 0.06172 0.06668 0.07429 2.06% Castro::computeTemp() 63 0.06457 0.07004 0.07354 2.04% FabArray::ParallelCopy_finish() 41 0.03742 0.05081 0.07007 1.94% Castro::reset_internal_energy(MultiFab) 63 0.04731 0.05045 0.05278 1.46% Castro::reset_internal_energy(Fab) 1008 0.04702 0.05015 0.05244 1.45% Castro::do_old_sources() 10 0.04288 0.04518 0.04909 1.36% Castro::normalize_species() 62 0.04186 0.04268 0.04525 1.25% FabArray::ParallelCopy_nowait() 41 0.0375 0.04219 0.04374 1.21% StateDataPhysBCFunct::() 41 0.0335 0.03591 0.04058 1.12% StateData::FillBoundary(geom) 41 0.03339 0.03581 0.04049 1.12% Castro::construct_new_source() 50 0.02905 0.03228 0.03826 1.06% Castro::construct_new_gravity_source() 10 0.02301 0.02616 0.03187 0.88% Castro::post_init() 1 0.02931 0.02963 0.02982 0.83% Gravity::interpolate_monopole_grav() 21 0.02825 0.02869 0.02972 0.82% Amr::writePlotFile() 2 0.02702 0.02716 0.02737 0.76% VisMF::Write(FabArray) 2 0.0139 0.01453 0.01733 0.48% Castro::post_timestep() 10 0.01518 0.01606 0.01712 0.47% Castro::apply_source_to_state() 20 0.01267 0.01384 0.01478 0.41% FabArray::Saxpy() 20 0.01262 0.01379 0.01472 0.41% Castro::check_for_nan() 20 0.01112 0.0121 0.01363 0.38% MultiFab::contains_nan() 20 0.0111 0.01207 0.0136 0.38% FabArray::setDomainBndry() 41 0.009002 0.01174 0.01282 0.35% Castro::Castro() 1 0.01136 0.01166 0.0126 0.35% Castro::construct_old_source() 50 0.007645 0.01014 0.01117 0.31% Castro::construct_old_gravity_source() 10 0.007588 0.01008 0.0111 0.31% Castro::initMFs() 1 0.007051 0.00758 0.009306 0.26% Castro::computeNewDt() 9 0.009111 0.009118 0.009123 0.25% AmrLevel::AmrLevel(dm) 1 0.005769 0.005997 0.006642 0.18% StateData::define() 4 0.005736 0.005972 0.006615 0.18% Castro::enforce_min_density() 62 0.005901 0.006116 0.006353 0.18% Castro::swap_state_time_levels() 10 0.003372 0.004522 0.004769 0.13% Castro::finalize_advance() 10 0.002916 0.00336 0.003883 0.11% Castro::finalize_do_advance() 10 0.0006908 0.001936 0.002412 0.07% Castro::buildMetrics() 1 0.001753 0.001847 0.002062 0.06% Castro::post_regrid() 1 0.001529 0.001628 0.001838 0.05% Amr::InitAmr() 1 0.0002838 0.0003216 0.0004263 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.128e-05 0.0001183 0.0001408 0.00% DistributionMapping::LeastUsedCPUs() 1 6.913e-06 0.0001125 0.000133 0.00% Castro::enforce_consistent_e() 1 8.003e-05 8.924e-05 0.0001115 0.00% FabArrayBase::getCPC() 41 6.681e-05 8.785e-05 0.0001046 0.00% Amr::writeSmallPlotFile() 1 2.534e-05 4.991e-05 5.847e-05 0.00% Castro::enforce_speed_limit() 62 2.68e-05 2.983e-05 3.236e-05 0.00% FabArrayBase::CPC::define() 2 2.226e-05 2.583e-05 3.092e-05 0.00% Gravity::swapTimeLevels() 10 9.878e-06 1.239e-05 1.632e-05 0.00% Gravity::set_mass_offset() 10 1.037e-05 1.173e-05 1.262e-05 0.00% Amr::initSubcycle() 1 8.749e-06 9.637e-06 1.056e-05 0.00% Castro::FluxRegCrseInit 10 8.543e-06 9.375e-06 1.012e-05 0.00% Castro::create_source_corrector() 10 8.265e-06 9.166e-06 9.938e-06 0.00% Castro::retry_advance_ctu() 10 4.534e-06 5.842e-06 7.035e-06 0.00% Castro::FluxRegFineAdd() 10 2.049e-06 2.573e-06 3.322e-06 0.00% DistributionMapping::Distribute() 1 8.76e-07 1.076e-06 1.42e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 34 B 37 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (23.04-8-gbacaa10a7636) finalized