MPI initialized with 8 MPI processes
MPI initialized with thread support level 3
AMReX (23.07-4-g9fc635426cae) initialized
Starting run at 18:07:50 UTC on 2023-07-03.
Successfully read inputs file ...
Castro git describe: 23.07
AMReX git describe: 23.07-4-g9fc635426
Microphysics git describe: 23.07-10-g139855b1
radiation initialized, nGroups = 1
reading extern runtime parameters ...
1 Species:
X
Radiation::nGroups = 1
Successfully read inputs file ...
Creating Radiation object
processors = 8
do_sync = 1
c = 2.99792458e+10
sigma = 5.670373e-05
reltol = 1e-06
abstol = 0
maxiter = 50
relInTol = 0.0001
absInTol = 0
maxInIter = 30
delta_e_rat_dt_tol = 100
delta_T_rat_dt_tol = 100
limiter = 0
closure = 3
update_limiter = 1000
update_planck = 1000
update_rosseland = 1000
delta_temp = 0.0001
underfac = 1
do_multigroup = 0
accelerate = 1
verbose = 2
SolverType = 5: SGFLDSolver
rad_hydro_combined = 1
comoving = 1
dimension 0 rad boundary conditions = 102, 102
dimension 1 rad boundary conditions = 102, 102
dimension 2 rad boundary conditions = 102, 102
Regridding radiation object at level 0...
done
hmabec.bho = 0
hmabec.use_subgrids = 0
hmabec.verbose = 1
hmabec.verbose_threshold = 0
Warning: the following castro.* parameters are ignored
castro.gravity = 0
grid_places() time: 0.024107153 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
Now regridding at level lbase = 0
grid_places() time: 0.013534209 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 0 TIME = 0 : REGRID with lbase = 0
Level 1 8 grids 4096 cells 0.0244140625 % of domain
smallest grid: 8 x 8 x 8 biggest grid: 8 x 8 x 8
Integrated Fluid Mass is 0.015394863670274892831
Integrated Fluid Energy is 29997674.940313063562
Integrated Radiant Energy is 0
Flux Register Energy is 0
Integrated Total Energy is 29997674.940313063562
INITIAL GRIDS
Level 0 512 grids 2097152 cells 100 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
Level 1 8 grids 4096 cells 0.0244140625 % of domain
smallest grid: 8 x 8 x 8 biggest grid: 8 x 8 x 8
PLOTFILE: file = rad-thermalwave-3d_plt00000
Write plotfile time = 1.172173956 seconds
[Level 0 step 1] ADVANCE at time 0 with dt = 1e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
hmabec.kdim = 5
hmabec.struct_flag = HYPRE_PFMG
hmabec.pfmg_relax_type = 1
hmabec.pfmg_pre_relax = 1
hmabec.pfmg_post_relax = 1
Radiation Update: Iteration 1, Relative = 1302911.3751869073603
Absolute = 30717.669438446406275
Radiation Update: Iteration 2, Relative = 0.99981662868865028848
Absolute = 23038.180019796520355
Radiation Update: Iteration 3, Relative = 2.5049676886893670336
Absolute = 17278.601887119162711
Radiation Update: Iteration 4, Relative = 0.24999769808886579403
Absolute = 12958.890609044661687
Radiation Update: Iteration 5, Relative = 0.24999136871489596734
Absolute = 9718.9517189824473462
Radiation Update: Iteration 6, Relative = 0.24997034509016052839
Absolute = 7288.6842628490339848
Radiation Update: Iteration 7, Relative = 0.24990068428997203043
Absolute = 5465.2062970578372187
Radiation Update: Iteration 8, Relative = 0.24967417681954887088
Absolute = 4095.7314557644167508
Radiation Update: Iteration 9, Relative = 0.24894352392640109461
Absolute = 3064.1399230131682998
Radiation Update: Iteration 10, Relative = 0.24661312837637117124
Absolute = 2279.7991164082250179
Radiation Update: Iteration 11, Relative = 0.23933587622854929355
Absolute = 1666.8873412593475223
Radiation Update: Iteration 12, Relative = 0.21783417974901370107
Absolute = 1154.0308078500111151
Radiation Update: Iteration 13, Relative = 0.16356882590200996774
Absolute = 677.78311949784119861
Radiation Update: Iteration 14, Relative = 0.093401067433613857438
Absolute = 253.16120207243830009
Radiation Update: Iteration 15, Relative = 0.037594276910639594369
Absolute = 32.948377915311084507
Radiation Update: Iteration 16, Relative = 0.013496216738669608234
Absolute = 0.51586630100746333483
Radiation Update: Iteration 17, Relative = 0.0035380401655716602234
Absolute = 0.00012547822916531004012
Radiation Update: Iteration 18, Relative = 0.00067881560898078185679
Absolute = 6.8453431956161381322e-07
Radiation Update: Iteration 19, Relative = 2.8606673921437502915e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 1] Advanced 2097152 cells
[Level 1 step 1] ADVANCE at time 0 with dt = 5e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 1740874.668854993768
Absolute = 58670.981734533677809
Radiation Update: Iteration 2, Relative = 1.3693198093305025687
Absolute = 44003.211727789370343
Radiation Update: Iteration 3, Relative = 8.4196406770147440568
Absolute = 33002.391901588940527
Radiation Update: Iteration 4, Relative = 0.3763660719885507655
Absolute = 24751.700721644869191
Radiation Update: Iteration 5, Relative = 0.28749652133241437868
Absolute = 18563.684361251551309
Radiation Update: Iteration 6, Relative = 0.24999540301672773523
Absolute = 13922.629596605205734
Radiation Update: Iteration 7, Relative = 0.24998542763614073348
Absolute = 10441.619538746959734
Radiation Update: Iteration 8, Relative = 0.24995183963189296361
Absolute = 7830.3145918788723066
Radiation Update: Iteration 9, Relative = 0.24984311118478511049
Absolute = 5870.558264735260309
Radiation Update: Iteration 10, Relative = 0.24949458091791984482
Absolute = 4397.6963824600443331
Radiation Update: Iteration 11, Relative = 0.24838332961586254144
Absolute = 3285.7945296728576068
Radiation Update: Iteration 12, Relative = 0.24487940019794587898
Absolute = 2434.8186206622967802
Radiation Update: Iteration 13, Relative = 0.23412909031066816978
Absolute = 1757.867178250006873
Radiation Update: Iteration 14, Relative = 0.20363451317251798911
Absolute = 1170.9480837558912754
Radiation Update: Iteration 15, Relative = 0.13441403470795371122
Absolute = 615.52161358528519486
Radiation Update: Iteration 16, Relative = 0.044161135494306925919
Absolute = 174.17163121083012811
Radiation Update: Iteration 17, Relative = 0.014457617083403137559
Absolute = 12.704644132393241307
Radiation Update: Iteration 18, Relative = 0.0033113586836228804493
Absolute = 0.064133107201541861286
Radiation Update: Iteration 19, Relative = 0.0013411947672423718287
Absolute = 2.8354446013345580013e-06
Radiation Update: Iteration 20, Relative = 3.796097931293171471e-16
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 1] Advanced 4096 cells
[Level 1 step 2] ADVANCE at time 5e-16 with dt = 5e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 1.1293800200035124526
Absolute = 58.814655124160253763
Radiation Update: Iteration 2, Relative = 0.2467666178888859585
Absolute = 1.4191275445136852795
Radiation Update: Iteration 3, Relative = 0.038876324362990849481
Absolute = 0.00081057948682428104803
Radiation Update: Iteration 4, Relative = 0.0026439701353413976384
Absolute = 5.6305549236412844039e-06
Radiation Update: Iteration 5, Relative = 3.8575994825840642752e-16
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 2] Advanced 4096 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274892831
Integrated Fluid Energy is 709447.77384859859012
Integrated Radiant Energy is 29288227.166465062648
Flux Register Energy is -1.1622617533884714772e-06
Integrated Total Energy is 29997674.940312497318
[STEP 1] Coarse TimeStep time: 14.09397871
[STEP 1] FAB kilobyte spread across MPI nodes: [381765 ... 381765]
STEP = 1 TIME = 1e-15 DT = 1e-15
[Level 0 step 2] ADVANCE at time 1e-15 with dt = 1.05e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 41.075798326101647717
Absolute = 285.14214365272982832
Radiation Update: Iteration 2, Relative = 0.70128009911549027411
Absolute = 33.627909301009822229
Radiation Update: Iteration 3, Relative = 0.084541388193911159998
Absolute = 0.54191828428429289488
Radiation Update: Iteration 4, Relative = 0.0040435739469876731331
Absolute = 0.00013980735730001470074
Radiation Update: Iteration 5, Relative = 0.00023937773254537758356
Absolute = 8.0258557444423672678e-07
Radiation Update: Iteration 6, Relative = 4.1346495104311542288e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 2] Advanced 2097152 cells
[Level 1 step 3] ADVANCE at time 1e-15 with dt = 5.25e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.54641284635438802653
Absolute = 2.9436244644628546396
Radiation Update: Iteration 2, Relative = 0.083948168272664158707
Absolute = 0.024972607350365549905
Radiation Update: Iteration 3, Relative = 0.0076108392531983141971
Absolute = 0.0001898912162001664683
Radiation Update: Iteration 4, Relative = 3.3611508343302327603e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 3] Advanced 4096 cells
[Level 1 step 4] ADVANCE at time 1.525e-15 with dt = 5.25e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.35303629913329459544
Absolute = 2.9178944731206399865
Radiation Update: Iteration 2, Relative = 0.036936704463492682493
Absolute = 0.020380594366431026288
Radiation Update: Iteration 3, Relative = 0.0022787336353348535377
Absolute = 0.00013162435776692404943
Radiation Update: Iteration 4, Relative = 2.1636132208591836343e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 4] Advanced 4096 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274892831
Integrated Fluid Energy is 710342.7726244883379
Integrated Radiant Energy is 29287332.167688909918
Flux Register Energy is -9.7548753893197968254e-07
Integrated Total Energy is 29997674.940312422812
[STEP 2] Coarse TimeStep time: 4.112265697
[STEP 2] FAB kilobyte spread across MPI nodes: [381956 ... 381956]
STEP = 2 TIME = 2.05e-15 DT = 1.05e-15
Now regridding at level lbase = 0
grid_places() time: 0.011774111 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 2 TIME = 2.05e-15 : REGRID with lbase = 0
Level 1 8 grids 32768 cells 0.1953125 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
[Level 0 step 3] ADVANCE at time 2.05e-15 with dt = 1.1025e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 20.853193549348414848
Absolute = 285.13245403782912035
Radiation Update: Iteration 2, Relative = 0.58147683155102625197
Absolute = 33.626305412898091163
Radiation Update: Iteration 3, Relative = 0.049883721653645782257
Absolute = 0.54187769460577328573
Radiation Update: Iteration 4, Relative = 0.0026300182932386803256
Absolute = 0.00013994342498335754499
Radiation Update: Iteration 5, Relative = 0.00013963658154538105397
Absolute = 8.6660387221826340465e-07
Radiation Update: Iteration 6, Relative = 1.442082702268482895e-16
Absolute = 4.5474735088646411896e-13
done
[Level 0 step 3] Advanced 2097152 cells
[Level 1 step 5] ADVANCE at time 2.05e-15 with dt = 5.5125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.27369076291213612073
Absolute = 3.041108748021590813
Radiation Update: Iteration 2, Relative = 0.021992160092094120705
Absolute = 0.019316320396171704488
Radiation Update: Iteration 3, Relative = 0.00094537318976123223008
Absolute = 0.00011619634423354341379
Radiation Update: Iteration 4, Relative = 2.2282573087317014389e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 5] Advanced 32768 cells
[Level 1 step 6] ADVANCE at time 2.60125e-15 with dt = 5.5125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.21467196345547268077
Absolute = 3.0206419259916810205
Radiation Update: Iteration 2, Relative = 0.013431330131291625146
Absolute = 0.017036881971190354079
Radiation Update: Iteration 3, Relative = 0.0004910851041875662808
Absolute = 9.2054821504206074678e-05
Radiation Update: Iteration 4, Relative = 1.6865288004540081796e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 6] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274819972
Integrated Fluid Energy is 711281.07259683741722
Integrated Radiant Energy is 29286393.867715492845
Flux Register Energy is 9.2765207909382522376e-14
Integrated Total Energy is 29997674.94031232968
[STEP 3] Coarse TimeStep time: 4.03603081
[STEP 3] FAB kilobyte spread across MPI nodes: [381956 ... 381956]
STEP = 3 TIME = 3.1525e-15 DT = 1.1025e-15
[Level 0 step 4] ADVANCE at time 3.1525e-15 with dt = 1.157625e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 14.594754855335613897
Absolute = 285.07206111059667819
Radiation Update: Iteration 2, Relative = 0.5109997846712267533
Absolute = 33.613575909707378742
Radiation Update: Iteration 3, Relative = 0.036631894175244705814
Absolute = 0.54147748268451323383
Radiation Update: Iteration 4, Relative = 0.0020179458718468145165
Absolute = 0.0001398441459059540648
Radiation Update: Iteration 5, Relative = 4.6879369783048846024e-15
Absolute = 9.5496943686157464981e-12
done
[Level 0 step 4] Advanced 2097152 cells
[Level 1 step 7] ADVANCE at time 3.1525e-15 with dt = 5.788125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.18541330783330803311
Absolute = 3.1526844403844336284
Radiation Update: Iteration 2, Relative = 0.0098401135622878770082
Absolute = 0.016934946691197438895
Radiation Update: Iteration 3, Relative = 0.00039205049452336503601
Absolute = 8.763587348425971868e-05
Radiation Update: Iteration 4, Relative = 1.8625811883701273917e-14
Absolute = 1.8189894035458564758e-12
done
[Level 1 step 7] Advanced 32768 cells
[Level 1 step 8] ADVANCE at time 3.7313125e-15 with dt = 5.788125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.15628586633639343639
Absolute = 3.1347432355308235685
Radiation Update: Iteration 2, Relative = 0.0069133105575879113744
Absolute = 0.015432358364080300817
Radiation Update: Iteration 3, Relative = 0.00029546802883574456704
Absolute = 7.3611773114379275285e-05
Radiation Update: Iteration 4, Relative = 1.5099478276500325176e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 8] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274819972
Integrated Fluid Energy is 712256.71972726634704
Integrated Radiant Energy is 29285418.220585085452
Flux Register Energy is -7.547564434728409521e-13
Integrated Total Energy is 29997674.940312352031
[STEP 4] Coarse TimeStep time: 3.481204652
[STEP 4] FAB kilobyte spread across MPI nodes: [384692 ... 384692]
STEP = 4 TIME = 4.310125e-15 DT = 1.157625e-15
Now regridding at level lbase = 0
grid_places() time: 0.011814837 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 4 TIME = 4.310125e-15 : REGRID with lbase = 0
Level 1 8 grids 32768 cells 0.1953125 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
[Level 0 step 5] ADVANCE at time 4.310125e-15 with dt = 1.21550625e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 11.529747077234953068
Absolute = 285.00830918719248075
Radiation Update: Iteration 2, Relative = 0.46308164710702742761
Absolute = 33.600098034219627152
Radiation Update: Iteration 3, Relative = 0.029571895692444762072
Absolute = 0.5410534341181119089
Radiation Update: Iteration 4, Relative = 0.0016787271579305274635
Absolute = 0.0001397197074766154401
Radiation Update: Iteration 5, Relative = 7.1245023713514584285e-15
Absolute = 9.0949470177292823792e-12
done
[Level 0 step 5] Advanced 2097152 cells
[Level 1 step 9] ADVANCE at time 4.310125e-15 with dt = 6.07753125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.14182061814645935405
Absolute = 3.2742810833836877293
Radiation Update: Iteration 2, Relative = 0.005613492606542485816
Absolute = 0.015706872603331589744
Radiation Update: Iteration 3, Relative = 0.00025141566387413118253
Absolute = 7.3175931277091876836e-05
Radiation Update: Iteration 4, Relative = 1.7771949245497882982e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 9] Advanced 32768 cells
[Level 1 step 10] ADVANCE at time 4.917878125e-15 with dt = 6.07753125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.12412021608235491998
Absolute = 3.2576373964192733013
Radiation Update: Iteration 2, Relative = 0.004260528798059499099
Absolute = 0.014576246833328809771
Radiation Update: Iteration 3, Relative = 0.00019911742456090323673
Absolute = 6.3535372568424008932e-05
Radiation Update: Iteration 4, Relative = 1.4787944796379750232e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 10] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274819972
Integrated Fluid Energy is 713272.29498282179702
Integrated Radiant Energy is 29284402.645329594612
Flux Register Energy is -7.3713322725346370106e-13
Integrated Total Energy is 29997674.940312415361
[STEP 5] Coarse TimeStep time: 3.504364831
[STEP 5] FAB kilobyte spread across MPI nodes: [384692 ... 384692]
STEP = 5 TIME = 5.52563125e-15 DT = 1.21550625e-15
PLOTFILE: file = rad-thermalwave-3d_plt00005
Write plotfile time = 0.702985221 seconds
Ending run at 18:08:22 UTC on 2023-07-03.
Deleting radiation in variableCleanUp...
done
Run time = 31.5058694
Run time without initialization = 29.95241252
Average number of zones advanced per microsecond: 0.357
Average number of zones advanced per microsecond per rank: 0.045
TinyProfiler total time across processes [min...avg...max]: 31.5 ... 31.5 ... 31.51
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
HypreMultiABec::setupSolver 98 10.4940 10.5222 10.5714 33.55%
HypreMultiABec::solve 98 8.602 8.652 8.68 27.55%
Radiation::compute_eta 98 1.221 1.236 1.283 4.07%
HypreMultiABec::clearSolver 98 0.7932 0.8135 0.8331 2.64%
Radiation::get_planck_and_temp 98 0.7947 0.8001 0.8083 2.57%
Castro::derive() 144 0.7332 0.7478 0.7941 2.52%
update_rosseland_from_temp 83 0.7238 0.7285 0.7342 2.33%
HypreMultiABec::finalizeMatrix 98 0.6449 0.6768 0.6989 2.22%
amrex::Copy() 1205 0.6134 0.654 0.6846 2.17%
HypreMultiABec::loadMatrix 98 0.5919 0.6017 0.6182 1.96%
FabArray::setVal() 959 0.3984 0.4752 0.5947 1.89%
RadSolve::levelBCoeffs 98 0.407 0.4103 0.4127 1.31%
FabArray::ParallelCopy_finish() 919 0.1832 0.3204 0.3977 1.26%
RadSolve::levelRhs 98 0.3729 0.3789 0.3835 1.22%
HypreMultiABec::loadLevelVectors 98 0.3686 0.3739 0.3805 1.21%
VisMF::Write(FabArray) 4 0.2722 0.3151 0.3794 1.20%
FillPatchIterator::Initialize 240 0.3468 0.3578 0.3619 1.15%
Radiation::compute_exchange 98 0.2638 0.2665 0.27 0.86%
FabArray::ParallelCopy_nowait() 919 0.2244 0.2293 0.2405 0.76%
Amr::writePlotFile() 2 0.1261 0.1866 0.2051 0.65%
RadSolve::levelFlux 98 0.1658 0.17 0.1721 0.55%
Radiation::get_rosseland 15 0.1542 0.1585 0.1656 0.53%
RadSolve::levelFluxReg 98 0.156 0.1591 0.1611 0.51%
Castro::reset_internal_energy(Fab) 7294 0.1471 0.1489 0.1507 0.48%
FillPatchSingleLevel 277 0.1194 0.1322 0.1458 0.46%
FillBoundary_finish() 181 0.06535 0.1052 0.129 0.41%
FluxRegister::Reflux() 156 0.1129 0.1166 0.1193 0.38%
Radiation::internal_energy_update 98 0.09687 0.1007 0.1058 0.34%
HypreMultiABec::vectorSetBoxValues 5362 0.09341 0.09745 0.102 0.32%
Castro::initialize_do_advance() 15 0.09448 0.09936 0.1007 0.32%
Radiation::get_c_v 10625 0.09567 0.0965 0.09749 0.31%
Radiation::single_group_update 15 0.0753 0.08058 0.08673 0.28%
Castro::initialize_advance() 15 0.08021 0.08278 0.08525 0.27%
Castro::Castro() 5 0.06577 0.07843 0.08434 0.27%
Radiation::scaledGradient 98 0.07576 0.07722 0.08103 0.26%
HypreMultiABec::finalizeVectors 98 0.05524 0.06894 0.07969 0.25%
HypreMultiABec::hmbc 8043 0.06711 0.06852 0.07226 0.23%
RadSolve::levelACoeffs 98 0.06928 0.07026 0.07131 0.23%
Castro::computeTemp() 76 0.06306 0.06397 0.06587 0.21%
StateData::define() 15 0.04688 0.05206 0.06415 0.20%
Castro::initMFs() 5 0.05327 0.05578 0.06238 0.20%
StateData::FillBoundary(geom) 962 0.05835 0.0599 0.06231 0.20%
Radiation:fluxLimiter 98 0.0578 0.06041 0.06188 0.20%
Castro::normalize_species() 58 0.0548 0.05573 0.05707 0.18%
HypreMultiABec::hmmat3 1968 0.05061 0.05366 0.05651 0.18%
FillBoundary_nowait() 181 0.04652 0.04751 0.04899 0.16%
Castro::swap_state_time_levels() 15 0.04394 0.04454 0.04521 0.14%
Castro::initData() 3 0.03271 0.03474 0.03979 0.13%
Castro::volWgtSum() 36 0.02878 0.03112 0.03369 0.11%
HypreMultiABec::hmac 2681 0.03071 0.03103 0.03143 0.10%
Castro::buildMetrics() 5 0.02362 0.02444 0.0271 0.09%
FabArray::setDomainBndry() 277 0.02069 0.02264 0.02498 0.08%
MultiFab::contains_nan() 15 0.01983 0.02109 0.02448 0.08%
Castro::enforce_min_density() 58 0.02166 0.02267 0.02338 0.07%
main() 1 0.01856 0.02016 0.02135 0.07%
HypreMultiABec::getAbsoluteResidual 98 0.02031 0.02057 0.0208 0.07%
HypreMultiABec::boundaryFlux 98 0.01836 0.01881 0.0193 0.06%
HypreMultiABec::getSolution 98 0.01887 0.01899 0.0192 0.06%
HypreMultiABec::vectorGetBoxValues 2681 0.01742 0.01762 0.01782 0.06%
AmrMesh::MakeNewGrids() 4 0.01187 0.01212 0.01272 0.04%
AMRErrorTag::operator() 4 0.008185 0.008441 0.008804 0.03%
Castro::apply_tagging_restrictions() 4 0.007727 0.008075 0.00864 0.03%
FillPatchInterp(MF) 37 0.0005455 0.005442 0.008139 0.03%
DistributionMapping::LeastUsedCPUs() 11 0.0005567 0.004494 0.005813 0.02%
Castro::expand_state() 15 0.003369 0.004226 0.005219 0.02%
FabArrayBase::CPC::define() 165 0.003137 0.003348 0.003568 0.01%
Castro::enforce_consistent_e() 3 0.001868 0.002143 0.00235 0.01%
Radiation::Regrid 5 0.001698 0.001881 0.002043 0.01%
FabArrayBase::getCPC() 742 0.001706 0.001776 0.001862 0.01%
FillPatchTwoLevels 126 0.0006662 0.001285 0.001659 0.01%
Castro::reset_internal_energy(MultiFab) 76 0.001481 0.001557 0.00161 0.01%
Castro::build_fine_mask() 18 0.001001 0.001239 0.001462 0.00%
Radiation::getBndryData 15 0.0009859 0.001109 0.001322 0.00%
Amr::regrid() 3 0.0003982 0.0005355 0.00122 0.00%
FabArray::ParallelCopy() 919 0.0009884 0.001068 0.001136 0.00%
TagBoxArray::collate() 4 0.0005586 0.0009369 0.001107 0.00%
OwnerMask() 4 0.000813 0.000873 0.0009456 0.00%
Castro::finalize_advance() 15 0.0005547 0.0006443 0.0009287 0.00%
RadSolve::levelSolve 98 0.000773 0.0008109 0.0008367 0.00%
Castro::post_timestep() 15 0.0004983 0.0005441 0.0007871 0.00%
amrex::average_down 19 0.0007195 0.0007416 0.0007733 0.00%
FabArrayBase::FB::FB() 27 0.0006846 0.0007232 0.000755 0.00%
StateDataPhysBCFunct::() 277 0.0006099 0.0006252 0.000655 0.00%
Amr::FinalizeInit() 1 6.072e-06 8.426e-05 0.0006137 0.00%
Amr::coarseTimeStep() 5 0.000315 0.0005629 0.0006026 0.00%
Amr::InitAmr() 1 0.0005815 0.0005904 0.0006009 0.00%
Amr::timeStep() 15 0.00026 0.0003686 0.0004094 0.00%
HypreMultiABec::bCoefficients 294 0.0003292 0.0003551 0.000396 0.00%
Castro::finalize_do_advance() 15 0.0002309 0.0002692 0.0003945 0.00%
FabArray::FillBoundary() 181 0.0003067 0.0003317 0.0003584 0.00%
Amr::grid_places() 4 0.0002077 0.0002262 0.000293 0.00%
TagBoxArray::mapPRD 4 0.0001873 0.0002011 0.0002097 0.00%
HypreMultiABec::aCoefficients 98 0.0001408 0.0001516 0.0001777 0.00%
FabArrayBase::getFB() 181 0.0001481 0.0001553 0.0001691 0.00%
Radiation::init_flux 10 3.745e-05 5.811e-05 0.0001489 0.00%
Radiation::deferred_sync_setup 5 9.622e-05 0.0001085 0.0001454 0.00%
Castro::clean_state() 58 0.000127 0.0001338 0.0001446 0.00%
Castro::do_advance_ctu() 15 8.251e-05 9.654e-05 0.0001402 0.00%
Castro::post_init() 2 6.209e-05 8.661e-05 0.0001381 0.00%
Castro::advance() 15 9.374e-05 0.0001088 0.0001179 0.00%
FabSetT<MF>::linComb() 30 9.945e-05 0.0001043 0.0001135 0.00%
FPinfo::FPinfo() 8 7.41e-05 9.263e-05 0.0001127 0.00%
Castro::errorEst() 4 7.297e-05 8.171e-05 9.449e-05 0.00%
DistributionMapping::SFCProcessorMapDoIt() 3 6.444e-05 7.248e-05 9.202e-05 0.00%
Castro::do_new_sources() 15 3.636e-05 6.408e-05 8.384e-05 0.00%
Castro::subcycle_advance_ctu() 15 5.565e-05 6.668e-05 8.363e-05 0.00%
FabArrayBase::TheFPinfo() 37 5.642e-05 6.655e-05 7.364e-05 0.00%
Castro::do_old_sources() 15 5.039e-05 5.626e-05 6.471e-05 0.00%
Amr::defBaseLevel() 1 3.939e-05 4.671e-05 5.668e-05 0.00%
AmrLevel::AmrLevel(dm) 5 4.438e-05 4.921e-05 5.611e-05 0.00%
Castro::estTimeStep() 32 3.265e-05 3.686e-05 5.122e-05 0.00%
RadSolve::levelBndry 15 1.594e-05 2.572e-05 4.859e-05 0.00%
Castro::retry_advance_ctu() 15 1.642e-05 2.212e-05 4.778e-05 0.00%
amrex::average_down_w_geom 19 1.518e-05 2.349e-05 4.319e-05 0.00%
Radiation::pre_timestep 15 3.723e-05 3.934e-05 4.059e-05 0.00%
Castro::enforce_speed_limit() 58 3.21e-05 3.511e-05 3.828e-05 0.00%
Amr::writeSmallPlotFile() 1 3.484e-05 3.634e-05 3.756e-05 0.00%
Castro::create_source_corrector() 15 1.51e-05 1.819e-05 3.407e-05 0.00%
Castro::avgDown(state_indx) 19 9.436e-06 2.01e-05 3.21e-05 0.00%
Castro::post_regrid() 8 1.824e-05 2.142e-05 2.503e-05 0.00%
ClusterList::intersect() 0 0 2.848e-06 2.278e-05 0.00%
Castro::check_for_nan() 15 1.822e-05 2.033e-05 2.275e-05 0.00%
Castro::init(old) 2 1.889e-05 2.008e-05 2.187e-05 0.00%
Amr::initSubcycle() 1 9.632e-06 1.256e-05 1.889e-05 0.00%
DistributionMapping::Distribute() 3 6.858e-06 1.123e-05 1.675e-05 0.00%
Radiation::filBndry 10 1.368e-05 1.473e-05 1.611e-05 0.00%
Amr::bldFineLevels() 1 1.3e-05 1.438e-05 1.516e-05 0.00%
Castro::apply_problem_tags() 4 1.163e-05 1.339e-05 1.472e-05 0.00%
Castro::computeNewDt() 6 6.99e-06 1.166e-05 1.453e-05 0.00%
AmrMesh-cluster 0 0 1.29e-06 1.032e-05 0.00%
Castro::avgDown() 6 6.25e-06 7.082e-06 9.233e-06 0.00%
Amr::initialInit() 1 1.898e-06 3.068e-06 9.213e-06 0.00%
Amr::init() 1 2.029e-06 3.652e-06 8.854e-06 0.00%
Amr::InitializeInit() 1 2.321e-06 3.008e-06 5.663e-06 0.00%
Castro::computeInitialDt() 2 2.988e-06 3.899e-06 5.614e-06 0.00%
BoxList::parallelComplementIn() 8 3.287e-06 3.79e-06 4.011e-06 0.00%
BoxList::complementIn 8 2.665e-06 3.297e-06 3.641e-06 0.00%
ClusterList::chop() 0 0 3.303e-07 2.642e-06 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 31.5 31.5 31.51 100.00%
Amr::coarseTimeStep() 5 29.23 29.23 29.23 92.77%
Amr::timeStep() 15 29.23 29.23 29.23 92.77%
Castro::advance() 15 29.07 29.07 29.07 92.28%
Radiation::single_group_update 15 27.62 27.66 27.71 87.94%
RadSolve::levelSolve 98 21.98 22.02 22.05 69.97%
HypreMultiABec::setupSolver 98 10.49 10.52 10.57 33.55%
HypreMultiABec::solve 98 8.602 8.652 8.68 27.55%
Amr::writePlotFile() 2 1.876 1.877 1.877 5.96%
Amr::init() 1 1.553 1.553 1.553 4.93%
Castro::derive() 144 1.374 1.385 1.434 4.55%
Radiation::compute_eta 98 1.317 1.333 1.381 4.38%
FillPatchIterator::Initialize 240 1.118 1.238 1.314 4.17%
Castro::subcycle_advance_ctu() 15 0.9902 1.036 1.121 3.56%
Castro::do_advance_ctu() 15 0.9901 1.036 1.121 3.56%
Castro::initialize_do_advance() 15 0.7892 0.8664 0.9248 2.94%
FillPatchSingleLevel 277 0.7139 0.8305 0.9223 2.93%
update_rosseland_from_temp 83 0.7921 0.8362 0.8493 2.70%
HypreMultiABec::clearSolver 98 0.7932 0.8135 0.8331 2.64%
Radiation::get_planck_and_temp 98 0.7947 0.8001 0.8083 2.57%
FabArray::ParallelCopy() 919 0.5799 0.7138 0.795 2.52%
HypreMultiABec::loadMatrix 98 0.7439 0.755 0.7734 2.45%
HypreMultiABec::finalizeMatrix 98 0.6449 0.6768 0.6989 2.22%
amrex::Copy() 1205 0.6134 0.654 0.6846 2.17%
Castro::expand_state() 15 0.5469 0.621 0.6773 2.15%
FabArray::setVal() 959 0.3984 0.4752 0.5947 1.89%
HypreMultiABec::loadLevelVectors 98 0.4621 0.4713 0.4825 1.53%
RadSolve::levelBCoeffs 98 0.4655 0.4727 0.4822 1.53%
Radiation::get_rosseland 15 0.3555 0.3984 0.4494 1.43%
Castro::initialize_advance() 15 0.2804 0.3467 0.4259 1.35%
FabArray::ParallelCopy_nowait() 919 0.3815 0.3924 0.4023 1.28%
FabArray::ParallelCopy_finish() 919 0.1832 0.3204 0.3977 1.26%
RadSolve::levelRhs 98 0.3802 0.3861 0.3909 1.24%
Amr::initialInit() 1 0.3789 0.379 0.3796 1.20%
VisMF::Write(FabArray) 4 0.2722 0.3151 0.3794 1.20%
Amr::InitializeInit() 1 0.3019 0.3038 0.307 0.97%
Amr::defBaseLevel() 1 0.3019 0.3038 0.307 0.97%
RadSolve::levelFlux 98 0.2649 0.2807 0.3011 0.96%
Radiation::compute_exchange 98 0.2638 0.2665 0.27 0.86%
Castro::clean_state() 58 0.2546 0.258 0.2616 0.83%
Castro::computeTemp() 76 0.2117 0.2144 0.2181 0.69%
RadSolve::levelFluxReg 98 0.1886 0.1964 0.2047 0.65%
Castro::Castro() 5 0.1731 0.1852 0.1904 0.60%
FillPatchTwoLevels 126 0.1748 0.1784 0.1801 0.57%
FabArray::FillBoundary() 181 0.1156 0.1539 0.1767 0.56%
FluxRegister::Reflux() 156 0.1468 0.1586 0.1668 0.53%
Castro::reset_internal_energy(MultiFab) 76 0.1487 0.1505 0.1523 0.48%
Castro::reset_internal_energy(Fab) 7294 0.1471 0.1489 0.1507 0.48%
FillBoundary_finish() 181 0.06535 0.1052 0.129 0.41%
Castro::do_new_sources() 15 0.044 0.07696 0.1202 0.38%
Radiation::internal_energy_update 98 0.09687 0.1007 0.1058 0.34%
HypreMultiABec::vectorSetBoxValues 5362 0.09341 0.09745 0.102 0.32%
Radiation::get_c_v 10625 0.09567 0.0965 0.09749 0.31%
RadSolve::levelACoeffs 98 0.09073 0.09433 0.09743 0.31%
Castro::post_timestep() 15 0.09168 0.09175 0.09183 0.29%
Amr::regrid() 3 0.08745 0.08861 0.08945 0.28%
Castro::initData() 3 0.07576 0.07798 0.08178 0.26%
Radiation::scaledGradient 98 0.07576 0.07722 0.08103 0.26%
HypreMultiABec::finalizeVectors 98 0.05524 0.06894 0.07969 0.25%
Amr::FinalizeInit() 1 0.07193 0.07514 0.07693 0.24%
HypreMultiABec::hmbc 8043 0.06711 0.06852 0.07226 0.23%
HypreMultiABec::bCoefficients 294 0.05684 0.06237 0.06979 0.22%
AmrLevel::AmrLevel(dm) 5 0.04692 0.05211 0.06421 0.20%
StateData::define() 15 0.04688 0.05206 0.06415 0.20%
StateDataPhysBCFunct::() 277 0.05897 0.06053 0.06294 0.20%
Castro::initMFs() 5 0.05327 0.05578 0.06238 0.20%
StateData::FillBoundary(geom) 962 0.05835 0.0599 0.06231 0.20%
Radiation:fluxLimiter 98 0.0578 0.06041 0.06188 0.20%
Amr::grid_places() 4 0.05548 0.05925 0.06132 0.19%
AmrMesh::MakeNewGrids() 4 0.05525 0.05902 0.06111 0.19%
Castro::normalize_species() 58 0.0548 0.05573 0.05707 0.18%
HypreMultiABec::hmmat3 1968 0.05061 0.05366 0.05651 0.18%
Amr::bldFineLevels() 1 0.05005 0.05333 0.05541 0.18%
Castro::do_old_sources() 15 0.04817 0.0518 0.05381 0.17%
FillBoundary_nowait() 181 0.04735 0.04839 0.04991 0.16%
Castro::post_regrid() 8 0.04656 0.04694 0.04752 0.15%
Castro::swap_state_time_levels() 15 0.04394 0.04454 0.04521 0.14%
Castro::errorEst() 4 0.03579 0.03948 0.04125 0.13%
HypreMultiABec::getSolution 98 0.03638 0.03661 0.03686 0.12%
Castro::volWgtSum() 36 0.02992 0.03235 0.03469 0.11%
Castro::buildMetrics() 5 0.0292 0.03091 0.03368 0.11%
HypreMultiABec::hmac 2681 0.03071 0.03103 0.03143 0.10%
Radiation::getBndryData 15 0.017 0.02559 0.03079 0.10%
HypreMultiABec::aCoefficients 98 0.02145 0.02408 0.027 0.09%
FabArray::setDomainBndry() 277 0.02069 0.02264 0.02498 0.08%
Castro::check_for_nan() 15 0.01986 0.02111 0.0245 0.08%
MultiFab::contains_nan() 15 0.01983 0.02109 0.02448 0.08%
Castro::enforce_min_density() 58 0.02166 0.02267 0.02338 0.07%
HypreMultiABec::getAbsoluteResidual 98 0.02031 0.02057 0.0208 0.07%
HypreMultiABec::boundaryFlux 98 0.01836 0.01881 0.0193 0.06%
HypreMultiABec::vectorGetBoxValues 2681 0.01742 0.01762 0.01782 0.06%
Castro::post_init() 2 0.01285 0.01333 0.0136 0.04%
Castro::finalize_do_advance() 15 0.004261 0.005106 0.008828 0.03%
AMRErrorTag::operator() 4 0.008185 0.008441 0.008804 0.03%
Castro::apply_tagging_restrictions() 4 0.007727 0.008075 0.00864 0.03%
TagBoxArray::mapPRD 4 0.00349 0.005883 0.008536 0.03%
FillPatchInterp(MF) 37 0.0005455 0.005442 0.008139 0.03%
FabArrayBase::TheFPinfo() 37 0.0005984 0.004556 0.005883 0.02%
FPinfo::FPinfo() 8 0.0005358 0.004489 0.005814 0.02%
DistributionMapping::LeastUsedCPUs() 11 0.0005567 0.004494 0.005813 0.02%
Castro::init(old) 2 0.005292 0.005315 0.005373 0.02%
FabArrayBase::getCPC() 742 0.004937 0.005123 0.005305 0.02%
FabArrayBase::CPC::define() 165 0.003137 0.003348 0.003568 0.01%
Radiation::pre_timestep 15 0.00202 0.002459 0.00281 0.01%
Radiation::init_flux 10 0.001981 0.002419 0.002769 0.01%
Castro::enforce_consistent_e() 3 0.001868 0.002143 0.00235 0.01%
Radiation::Regrid 5 0.001698 0.001881 0.002043 0.01%
Castro::build_fine_mask() 18 0.001001 0.001239 0.001462 0.00%
Radiation::filBndry 10 0.001325 0.001373 0.001428 0.00%
TagBoxArray::collate() 4 0.0005586 0.0009369 0.001107 0.00%
FabSetT<MF>::linComb() 30 0.000963 0.0009926 0.001032 0.00%
Castro::avgDown() 6 0.000971 0.0009976 0.001032 0.00%
Castro::avgDown(state_indx) 19 0.0009673 0.0009943 0.001027 0.00%
amrex::average_down_w_geom 19 0.0009436 0.0009742 0.001017 0.00%
amrex::average_down 19 0.0009268 0.0009507 0.0009742 0.00%
OwnerMask() 4 0.000813 0.000873 0.0009456 0.00%
Castro::finalize_advance() 15 0.0005547 0.0006443 0.0009287 0.00%
FabArrayBase::getFB() 181 0.0008335 0.0008785 0.0009129 0.00%
FabArrayBase::FB::FB() 27 0.0006846 0.0007232 0.000755 0.00%
Amr::InitAmr() 1 0.0005935 0.000603 0.0006166 0.00%
DistributionMapping::SFCProcessorMapDoIt() 3 0.0001423 0.0001811 0.0002071 0.00%
Radiation::deferred_sync_setup 5 9.622e-05 0.0001085 0.0001454 0.00%
Castro::estTimeStep() 32 3.265e-05 3.686e-05 5.122e-05 0.00%
RadSolve::levelBndry 15 1.594e-05 2.572e-05 4.859e-05 0.00%
Castro::retry_advance_ctu() 15 1.642e-05 2.212e-05 4.778e-05 0.00%
Castro::enforce_speed_limit() 58 3.21e-05 3.511e-05 3.828e-05 0.00%
Amr::writeSmallPlotFile() 1 3.484e-05 3.634e-05 3.756e-05 0.00%
AmrMesh-cluster 0 0 4.468e-06 3.574e-05 0.00%
Castro::create_source_corrector() 15 1.51e-05 1.819e-05 3.407e-05 0.00%
ClusterList::intersect() 0 0 2.848e-06 2.278e-05 0.00%
Castro::computeNewDt() 6 1.37e-05 1.928e-05 2.273e-05 0.00%
Amr::initSubcycle() 1 9.632e-06 1.256e-05 1.889e-05 0.00%
DistributionMapping::Distribute() 3 6.858e-06 1.123e-05 1.675e-05 0.00%
Castro::apply_problem_tags() 4 1.163e-05 1.339e-05 1.472e-05 0.00%
BoxList::parallelComplementIn() 8 6.095e-06 7.087e-06 7.635e-06 0.00%
Castro::computeInitialDt() 2 2.988e-06 3.899e-06 5.614e-06 0.00%
BoxList::complementIn 8 2.665e-06 3.297e-06 3.641e-06 0.00%
ClusterList::chop() 0 0 3.303e-07 2.642e-06 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::castro.gravity(nvals = 1) :: [0]
[TOP]::habec.verbose(nvals = 1) :: [1]
Pinned Memory Usage:
---------------------------------------------------------------------------------------------------------------------
Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max
---------------------------------------------------------------------------------------------------------------------
The_Pinned_Arena::Initialize() 8 8 3 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB
---------------------------------------------------------------------------------------------------------------------
AMReX (23.07-4-g9fc635426cae) finalized