MPI initialized with 8 MPI processes
MPI initialized with thread support level 3
AMReX (23.08-19-ge7d3d5a4fad6) initialized
Starting run at 06:34:55 UTC on 2023-08-07.
Successfully read inputs file ...
Castro git describe: 23.08
AMReX git describe: 23.08-19-ge7d3d5a4f
Microphysics git describe: 23.08-3-g3d2714f8
radiation initialized, nGroups = 1
reading extern runtime parameters ...
1 Species:
X
Radiation::nGroups = 1
Successfully read inputs file ...
Creating Radiation object
processors = 8
do_sync = 1
c = 2.99792458e+10
sigma = 5.670373e-05
reltol = 1e-06
abstol = 0
maxiter = 50
relInTol = 0.0001
absInTol = 0
maxInIter = 30
delta_e_rat_dt_tol = 100
delta_T_rat_dt_tol = 100
limiter = 0
closure = 3
update_limiter = 1000
update_planck = 1000
update_rosseland = 1000
delta_temp = 0.0001
underfac = 1
do_multigroup = 0
accelerate = 1
verbose = 2
SolverType = 5: SGFLDSolver
rad_hydro_combined = 1
comoving = 1
dimension 0 rad boundary conditions = 102, 102
dimension 1 rad boundary conditions = 102, 102
dimension 2 rad boundary conditions = 102, 102
Regridding radiation object at level 0...
done
hmabec.bho = 0
hmabec.use_subgrids = 0
hmabec.verbose = 1
hmabec.verbose_threshold = 0
Warning: the following castro.* parameters are ignored
castro.gravity = 0
grid_places() time: 0.028129551 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
Now regridding at level lbase = 0
grid_places() time: 0.015191498 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 0 TIME = 0 : REGRID with lbase = 0
Level 1 8 grids 4096 cells 0.0244140625 % of domain
smallest grid: 8 x 8 x 8 biggest grid: 8 x 8 x 8
Integrated Fluid Mass is 0.015394863670274892831
Integrated Fluid Energy is 29997674.940313063562
Integrated Radiant Energy is 0
Flux Register Energy is 0
Integrated Total Energy is 29997674.940313063562
INITIAL GRIDS
Level 0 512 grids 2097152 cells 100 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
Level 1 8 grids 4096 cells 0.0244140625 % of domain
smallest grid: 8 x 8 x 8 biggest grid: 8 x 8 x 8
PLOTFILE: file = rad-thermalwave-3d_plt00000
Write plotfile time = 1.127827405 seconds
[Level 0 step 1] ADVANCE at time 0 with dt = 1e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
hmabec.kdim = 5
hmabec.struct_flag = HYPRE_PFMG
hmabec.pfmg_relax_type = 1
hmabec.pfmg_pre_relax = 1
hmabec.pfmg_post_relax = 1
Radiation Update: Iteration 1, Relative = 1302911.3751869073603
Absolute = 30717.669438446406275
Radiation Update: Iteration 2, Relative = 0.99981662868865028848
Absolute = 23038.180019796520355
Radiation Update: Iteration 3, Relative = 2.5049676886893679217
Absolute = 17278.601887119169987
Radiation Update: Iteration 4, Relative = 0.24999769808886593281
Absolute = 12958.890609044668963
Radiation Update: Iteration 5, Relative = 0.24999136871489602285
Absolute = 9718.9517189824473462
Radiation Update: Iteration 6, Relative = 0.24997033128851878225
Absolute = 7288.6842628490230709
Radiation Update: Iteration 7, Relative = 0.24990070262122299205
Absolute = 5465.2062970578444947
Radiation Update: Iteration 8, Relative = 0.24967419762748074841
Absolute = 4095.7314557644131128
Radiation Update: Iteration 9, Relative = 0.24894351000289596798
Absolute = 3064.1399230131682998
Radiation Update: Iteration 10, Relative = 0.24661313036933193987
Absolute = 2279.7991164082268369
Radiation Update: Iteration 11, Relative = 0.23933586571505907625
Absolute = 1666.8872353665337869
Radiation Update: Iteration 12, Relative = 0.21783418752900138293
Absolute = 1154.030872133507728
Radiation Update: Iteration 13, Relative = 0.16356883430105931265
Absolute = 677.78316110712194131
Radiation Update: Iteration 14, Relative = 0.093401072746009616843
Absolute = 253.16119395304576756
Radiation Update: Iteration 15, Relative = 0.037594275648102040699
Absolute = 32.94838537221403385
Radiation Update: Iteration 16, Relative = 0.0134962202343157818
Absolute = 0.51586695283367589582
Radiation Update: Iteration 17, Relative = 0.0035380388796303861854
Absolute = 0.00012547822871056268923
Radiation Update: Iteration 18, Relative = 0.00067881569843938286551
Absolute = 6.8453740553753306131e-07
Radiation Update: Iteration 19, Relative = 2.8606673921437502915e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 1] Advanced 2097152 cells
[Level 1 step 1] ADVANCE at time 0 with dt = 5e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 1740874.668854993768
Absolute = 58670.981734533677809
Radiation Update: Iteration 2, Relative = 1.3693198093305067875
Absolute = 44003.211727789370343
Radiation Update: Iteration 3, Relative = 8.4196406826180574257
Absolute = 33002.391901588940527
Radiation Update: Iteration 4, Relative = 0.37636607392454179966
Absolute = 24751.700721644883743
Radiation Update: Iteration 5, Relative = 0.28749652133088227091
Absolute = 18563.700313886394724
Radiation Update: Iteration 6, Relative = 0.24999531548820527749
Absolute = 13922.620733922798536
Radiation Update: Iteration 7, Relative = 0.24998545120069648462
Absolute = 10441.618750627872942
Radiation Update: Iteration 8, Relative = 0.2499517781403827188
Absolute = 7830.3110903618398879
Radiation Update: Iteration 9, Relative = 0.24984312765789992716
Absolute = 5870.5579521638974256
Radiation Update: Iteration 10, Relative = 0.2494946002186735623
Absolute = 4397.696101984307461
Radiation Update: Iteration 11, Relative = 0.24838333322188957397
Absolute = 3285.7940291271042952
Radiation Update: Iteration 12, Relative = 0.24487940595321369686
Absolute = 2434.8185895684700881
Radiation Update: Iteration 13, Relative = 0.23412909072132412347
Absolute = 1757.867054671396545
Radiation Update: Iteration 14, Relative = 0.2036345008265787182
Absolute = 1170.9479946106948773
Radiation Update: Iteration 15, Relative = 0.13441402972060562115
Absolute = 615.5215818686356215
Radiation Update: Iteration 16, Relative = 0.044161140480810649744
Absolute = 174.17160435714549749
Radiation Update: Iteration 17, Relative = 0.014457617881609293245
Absolute = 12.704636963490884227
Radiation Update: Iteration 18, Relative = 0.0033113599243763608762
Absolute = 0.064133107453471893677
Radiation Update: Iteration 19, Relative = 0.0013411946267766876057
Absolute = 2.8354589565182664046e-06
Radiation Update: Iteration 20, Relative = 3.796097931293171471e-16
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 1] Advanced 4096 cells
[Level 1 step 2] ADVANCE at time 5e-16 with dt = 5e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 1.1293800200035124526
Absolute = 58.81465512416070851
Radiation Update: Iteration 2, Relative = 0.24676661788898782146
Absolute = 1.4191275508756007184
Radiation Update: Iteration 3, Relative = 0.038876324482146826234
Absolute = 0.00081055567125076777302
Radiation Update: Iteration 4, Relative = 0.0026439702170363123604
Absolute = 5.6305582054605451958e-06
Radiation Update: Iteration 5, Relative = 3.857599482584307343e-16
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 2] Advanced 4096 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274892831
Integrated Fluid Energy is 709447.77384859882295
Integrated Radiant Energy is 29288227.166465058923
Flux Register Energy is -1.1622617533149873456e-06
Integrated Total Energy is 29997674.940312497318
[STEP 1] Coarse TimeStep time: 14.19441241
[STEP 1] FAB kilobyte spread across MPI nodes: [381765 ... 381765]
STEP = 1 TIME = 1e-15 DT = 1e-15
[Level 0 step 2] ADVANCE at time 1e-15 with dt = 1.05e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 41.075798328605387155
Absolute = 285.14215141004433463
Radiation Update: Iteration 2, Relative = 0.70128009912250388602
Absolute = 33.627916367149282451
Radiation Update: Iteration 3, Relative = 0.084541388209284085153
Absolute = 0.54191827281829318963
Radiation Update: Iteration 4, Relative = 0.004043574421279898419
Absolute = 0.00013980735730001470074
Radiation Update: Iteration 5, Relative = 0.00023937818045940403638
Absolute = 8.0259146750805143711e-07
Radiation Update: Iteration 6, Relative = 4.1346497443275626292e-16
Absolute = 4.5474735088646411896e-13
done
[Level 0 step 2] Advanced 2097152 cells
[Level 1 step 3] ADVANCE at time 1e-15 with dt = 5.25e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.54641284635439402173
Absolute = 2.9436244644628573042
Radiation Update: Iteration 2, Relative = 0.083948168273111814508
Absolute = 0.024972607350363773548
Radiation Update: Iteration 3, Relative = 0.0076108392530417840263
Absolute = 0.00018989121619661375462
Radiation Update: Iteration 4, Relative = 3.3611508343305987918e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 3] Advanced 4096 cells
[Level 1 step 4] ADVANCE at time 1.525e-15 with dt = 5.25e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.35303629913329753753
Absolute = 2.9178944731206346574
Radiation Update: Iteration 2, Relative = 0.03693670446363742782
Absolute = 0.020380594366429249931
Radiation Update: Iteration 3, Relative = 0.0022787336352588088983
Absolute = 0.00013162435776337133575
Radiation Update: Iteration 4, Relative = 2.1636132208589239413e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 4] Advanced 4096 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274892831
Integrated Fluid Energy is 710342.77262448845431
Integrated Radiant Energy is 29287332.167688906193
Flux Register Energy is -9.7548753890787439541e-07
Integrated Total Energy is 29997674.940312419087
[STEP 2] Coarse TimeStep time: 4.15316105
[STEP 2] FAB kilobyte spread across MPI nodes: [381956 ... 381956]
STEP = 2 TIME = 2.05e-15 DT = 1.05e-15
Now regridding at level lbase = 0
grid_places() time: 0.01140977 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 2 TIME = 2.05e-15 : REGRID with lbase = 0
Level 1 8 grids 32768 cells 0.1953125 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
[Level 0 step 3] ADVANCE at time 2.05e-15 with dt = 1.1025e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 20.853193550344439444
Absolute = 285.13245403782866561
Radiation Update: Iteration 2, Relative = 0.58147683155753338013
Absolute = 33.626305412896726921
Radiation Update: Iteration 3, Relative = 0.049883721652757749554
Absolute = 0.54187769453619694104
Radiation Update: Iteration 4, Relative = 0.0026300185572377507599
Absolute = 0.00013993746097185066901
Radiation Update: Iteration 5, Relative = 0.00013963684158169777918
Absolute = 8.6661158116285719188e-07
Radiation Update: Iteration 6, Relative = 2.8841654045367306109e-16
Absolute = 9.0949470177292823792e-13
done
[Level 0 step 3] Advanced 2097152 cells
[Level 1 step 5] ADVANCE at time 2.05e-15 with dt = 5.5125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.27369076291192706574
Absolute = 3.0411087480215854839
Radiation Update: Iteration 2, Relative = 0.021992160092234629837
Absolute = 0.019316320396168151774
Radiation Update: Iteration 3, Relative = 0.00094537318952487051863
Absolute = 0.00011619634420512170436
Radiation Update: Iteration 4, Relative = 2.2158089437866693322e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 5] Advanced 32768 cells
[Level 1 step 6] ADVANCE at time 2.60125e-15 with dt = 5.5125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.21467196345547245873
Absolute = 3.0206419259916792441
Radiation Update: Iteration 2, Relative = 0.013431330131311340279
Absolute = 0.017036881971193906793
Radiation Update: Iteration 3, Relative = 0.00049108510390611845569
Absolute = 9.2054821454468083175e-05
Radiation Update: Iteration 4, Relative = 1.6659614140711882466e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 6] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274819972
Integrated Fluid Energy is 711281.07259683741722
Integrated Radiant Energy is 29286393.867715489119
Flux Register Energy is 9.2765207824576655538e-14
Integrated Total Energy is 29997674.940312325954
[STEP 3] Coarse TimeStep time: 4.096792875
[STEP 3] FAB kilobyte spread across MPI nodes: [381956 ... 381956]
STEP = 3 TIME = 3.1525e-15 DT = 1.1025e-15
[Level 0 step 4] ADVANCE at time 3.1525e-15 with dt = 1.157625e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 14.594754855865101462
Absolute = 285.07206111059667819
Radiation Update: Iteration 2, Relative = 0.51099978467695539308
Absolute = 33.61357590957550201
Radiation Update: Iteration 3, Relative = 0.036631894140127414794
Absolute = 0.54147749412913981359
Radiation Update: Iteration 4, Relative = 0.00201794587205189873
Absolute = 0.00013984414817969081923
Radiation Update: Iteration 5, Relative = 4.6879370458291014368e-15
Absolute = 9.5496943686157464981e-12
done
[Level 0 step 4] Advanced 2097152 cells
[Level 1 step 7] ADVANCE at time 3.1525e-15 with dt = 5.788125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.1854133078333054796
Absolute = 3.1526844403844300757
Radiation Update: Iteration 2, Relative = 0.0098401135623457820778
Absolute = 0.016934946691186780754
Radiation Update: Iteration 3, Relative = 0.00039205049421427504283
Absolute = 8.7635873413205445104e-05
Radiation Update: Iteration 4, Relative = 1.8625811883700510299e-14
Absolute = 1.8189894035458564758e-12
done
[Level 1 step 7] Advanced 32768 cells
[Level 1 step 8] ADVANCE at time 3.7313125e-15 with dt = 5.788125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.15628586633639340864
Absolute = 3.134743235530830674
Radiation Update: Iteration 2, Relative = 0.0069133105575972771464
Absolute = 0.015432358364094511671
Radiation Update: Iteration 3, Relative = 0.00029546802907180779764
Absolute = 7.3611773174775407824e-05
Radiation Update: Iteration 4, Relative = 1.5099478276026251327e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 8] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274819972
Integrated Fluid Energy is 712256.71972726634704
Integrated Radiant Energy is 29285418.220585085452
Flux Register Energy is -7.5475644347553625631e-13
Integrated Total Energy is 29997674.940312352031
[STEP 4] Coarse TimeStep time: 3.501496716
[STEP 4] FAB kilobyte spread across MPI nodes: [384692 ... 384692]
STEP = 4 TIME = 4.310125e-15 DT = 1.157625e-15
Now regridding at level lbase = 0
grid_places() time: 0.011179735 new finest: 1
Regridding radiation object at level 1...
done
Warning: the following castro.* parameters are ignored
castro.gravity = 0
STEP = 4 TIME = 4.310125e-15 : REGRID with lbase = 0
Level 1 8 grids 32768 cells 0.1953125 % of domain
smallest grid: 16 x 16 x 16 biggest grid: 16 x 16 x 16
[Level 0 step 5] ADVANCE at time 4.310125e-15 with dt = 1.21550625e-15
Radiation flux initialization at level 0...
done
Radiation implicit update, level 0...
Radiation Update: Iteration 1, Relative = 11.529747077603856198
Absolute = 285.00830918719248075
Radiation Update: Iteration 2, Relative = 0.46308164711237287392
Absolute = 33.600098034219627152
Radiation Update: Iteration 3, Relative = 0.029571895693538637062
Absolute = 0.54105343411765716155
Radiation Update: Iteration 4, Relative = 0.0016787271577487065423
Absolute = 0.00013973119848742499016
Radiation Update: Iteration 5, Relative = 7.2698991551690783461e-15
Absolute = 9.0949470177292823792e-12
done
[Level 0 step 5] Advanced 2097152 cells
[Level 1 step 9] ADVANCE at time 4.310125e-15 with dt = 6.07753125e-16
Radiation flux initialization at level 1...
done
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.14182061814645949283
Absolute = 3.2742810833836912821
Radiation Update: Iteration 2, Relative = 0.0056134926065625149333
Absolute = 0.015706872603402644017
Radiation Update: Iteration 3, Relative = 0.00025141566372381630914
Absolute = 7.3175931227353885333e-05
Radiation Update: Iteration 4, Relative = 1.7771949245834723433e-14
Absolute = 1.3642420526593923569e-12
done
[Level 1 step 9] Advanced 32768 cells
[Level 1 step 10] ADVANCE at time 4.917878125e-15 with dt = 6.07753125e-16
Radiation implicit update, level 1...
Radiation Update: Iteration 1, Relative = 0.12412021608235490611
Absolute = 3.2576373964191915888
Radiation Update: Iteration 2, Relative = 0.0042605287980643702025
Absolute = 0.01457624683325065007
Radiation Update: Iteration 3, Relative = 0.00019911742442456318723
Absolute = 6.3535372522238731108e-05
Radiation Update: Iteration 4, Relative = 1.4906246727192562549e-14
Absolute = 9.0949470177292823792e-13
done
[Level 1 step 10] Advanced 32768 cells
Radiation deferred sync setup for coarse level 0...
done
Integrated Fluid Mass is 0.015394863670274819972
Integrated Fluid Energy is 713272.29498282179702
Integrated Radiant Energy is 29284402.645329594612
Flux Register Energy is -7.3713322724497348774e-13
Integrated Total Energy is 29997674.940312415361
[STEP 5] Coarse TimeStep time: 3.526024351
[STEP 5] FAB kilobyte spread across MPI nodes: [384692 ... 384692]
STEP = 5 TIME = 5.52563125e-15 DT = 1.21550625e-15
PLOTFILE: file = rad-thermalwave-3d_plt00005
Write plotfile time = 0.738017921 seconds
Ending run at 06:35:26 UTC on 2023-08-07.
Deleting radiation in variableCleanUp...
done
Run time = 31.73853537
Run time without initialization = 30.23148003
Average number of zones advanced per microsecond: 0.354
Average number of zones advanced per microsecond per rank: 0.044
TinyProfiler total time across processes [min...avg...max]: 31.74 ... 31.74 ... 31.74
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
HypreMultiABec::setupSolver 98 10.9814 11.0026 11.0429 34.79%
HypreMultiABec::solve 98 8.556 8.596 8.617 27.15%
Radiation::compute_eta 98 1.202 1.215 1.235 3.89%
HypreMultiABec::clearSolver 98 0.8028 0.821 0.8431 2.66%
Radiation::get_planck_and_temp 98 0.7685 0.7725 0.7757 2.44%
AmrLevel::derive() 144 0.7019 0.7099 0.7252 2.29%
update_rosseland_from_temp 83 0.7089 0.7125 0.7223 2.28%
HypreMultiABec::finalizeMatrix 98 0.6544 0.6754 0.6935 2.19%
amrex::Copy() 1205 0.639 0.6596 0.6849 2.16%
FabArray::setVal() 959 0.4074 0.5028 0.5951 1.87%
HypreMultiABec::loadMatrix 98 0.5592 0.571 0.5851 1.84%
RadSolve::levelBCoeffs 98 0.4039 0.407 0.4118 1.30%
FabArray::ParallelCopy_finish() 919 0.1876 0.3028 0.3995 1.26%
RadSolve::levelRhs 98 0.3692 0.3728 0.3789 1.19%
FillPatchIterator::Initialize 240 0.3517 0.359 0.3643 1.15%
VisMF::Write(FabArray) 4 0.2797 0.3005 0.3495 1.10%
HypreMultiABec::loadLevelVectors 98 0.3223 0.3243 0.329 1.04%
Radiation::compute_exchange 98 0.2642 0.2654 0.2701 0.85%
FabArray::ParallelCopy_nowait() 919 0.2293 0.2323 0.2354 0.74%
Amr::writePlotFile() 2 0.1332 0.2004 0.2163 0.68%
RadSolve::levelFlux 98 0.168 0.1697 0.1709 0.54%
RadSolve::levelFluxReg 98 0.1563 0.1581 0.162 0.51%
Radiation::get_rosseland 15 0.1511 0.1518 0.1529 0.48%
Castro::reset_internal_energy(Fab) 7294 0.1428 0.1438 0.1452 0.46%
FillPatchSingleLevel 277 0.1194 0.1314 0.144 0.45%
FluxRegister::Reflux() 156 0.1137 0.1161 0.1181 0.37%
Radiation::internal_energy_update 98 0.09654 0.1024 0.106 0.33%
Castro::initialize_do_advance() 15 0.1001 0.1017 0.1033 0.33%
HypreMultiABec::vectorSetBoxValues 5362 0.09588 0.0992 0.1025 0.32%
Radiation::get_c_v 10625 0.09465 0.09484 0.09521 0.30%
Radiation::single_group_update 15 0.08085 0.08444 0.09228 0.29%
Castro::initialize_advance() 15 0.08066 0.08349 0.08966 0.28%
FillBoundary_finish() 181 0.04526 0.06874 0.08629 0.27%
Radiation::scaledGradient 98 0.07533 0.07686 0.07914 0.25%
Castro::Castro() 5 0.06562 0.07408 0.07809 0.25%
HypreMultiABec::finalizeVectors 98 0.06796 0.07273 0.07685 0.24%
Castro::computeTemp() 76 0.06313 0.06514 0.07418 0.23%
RadSolve::levelACoeffs 98 0.06854 0.06977 0.07399 0.23%
HypreMultiABec::hmbc 8043 0.06712 0.06826 0.07081 0.22%
Castro::initMFs() 5 0.05338 0.0556 0.06348 0.20%
StateData::FillBoundary(geom) 962 0.0573 0.05897 0.06268 0.20%
Radiation:fluxLimiter 98 0.05756 0.05856 0.05985 0.19%
Castro::normalize_species() 58 0.05492 0.05549 0.0557 0.18%
HypreMultiABec::hmmat3 1968 0.04869 0.05211 0.05552 0.17%
StateData::define() 15 0.04655 0.04916 0.05277 0.17%
FillBoundary_nowait() 181 0.04445 0.04684 0.04866 0.15%
Castro::swap_state_time_levels() 15 0.04437 0.04478 0.0453 0.14%
Castro::initData() 3 0.03132 0.03464 0.04013 0.13%
AmrLevel::FillPatch() 225 0.03226 0.03584 0.03824 0.12%
Castro::volWgtSum() 36 0.029 0.03085 0.0366 0.12%
HypreMultiABec::hmac 2681 0.03052 0.03067 0.03096 0.10%
Castro::buildMetrics() 5 0.0234 0.02462 0.02673 0.08%
FabArray::setDomainBndry() 277 0.02043 0.02236 0.02393 0.08%
Castro::enforce_min_density() 58 0.0216 0.02207 0.02315 0.07%
MultiFab::contains_nan() 15 0.0169 0.01938 0.02168 0.07%
Amr::FinalizeInit() 1 5.195e-06 0.002692 0.02148 0.07%
main() 1 0.0187 0.02039 0.02132 0.07%
HypreMultiABec::getAbsoluteResidual 98 0.0199 0.02017 0.02034 0.06%
HypreMultiABec::getSolution 98 0.0188 0.01888 0.01901 0.06%
HypreMultiABec::boundaryFlux 98 0.0182 0.01863 0.0189 0.06%
HypreMultiABec::vectorGetBoxValues 2681 0.01715 0.01732 0.01752 0.06%
AmrMesh::MakeNewGrids() 4 0.009955 0.01044 0.01105 0.03%
Castro::apply_tagging_restrictions() 4 0.008397 0.008657 0.009557 0.03%
AMRErrorTag::operator() 4 0.007945 0.008497 0.009239 0.03%
FillPatchInterp(MF) 37 0.0006044 0.00594 0.008836 0.03%
FabArrayBase::CPC::define() 165 0.003012 0.00333 0.003459 0.01%
DistributionMapping::LeastUsedCPUs() 11 0.0004943 0.001751 0.002737 0.01%
Castro::enforce_consistent_e() 3 0.002067 0.002267 0.002348 0.01%
Radiation::Regrid 5 0.001826 0.001999 0.002294 0.01%
FabArrayBase::getCPC() 742 0.001723 0.00181 0.00189 0.01%
FillPatchTwoLevels 126 0.000655 0.001274 0.001599 0.01%
Castro::reset_internal_energy(MultiFab) 76 0.001496 0.001528 0.001557 0.00%
Castro::build_fine_mask() 18 0.0009581 0.001242 0.00137 0.00%
Radiation::getBndryData 15 0.001014 0.001072 0.001344 0.00%
Amr::regrid() 3 0.0003917 0.0005532 0.00123 0.00%
TagBoxArray::collate() 4 0.0002549 0.0008987 0.001165 0.00%
FabArray::ParallelCopy() 919 0.0009695 0.001047 0.001091 0.00%
OwnerMask() 4 0.0008236 0.0008732 0.0009508 0.00%
Castro::finalize_advance() 15 0.0005431 0.0006759 0.0009058 0.00%
RadSolve::levelSolve 98 0.0007536 0.0007974 0.000881 0.00%
Castro::post_timestep() 15 0.0004943 0.0005452 0.0008283 0.00%
amrex::average_down 19 0.0007192 0.0007384 0.0007599 0.00%
FabArrayBase::FB::FB() 27 0.0006646 0.0006937 0.0007517 0.00%
StateDataPhysBCFunct::() 277 0.0005802 0.0006456 0.0007285 0.00%
Amr::coarseTimeStep() 5 0.000343 0.0006173 0.0006615 0.00%
Amr::InitAmr() 1 0.000545 0.0005564 0.0005683 0.00%
FillPatchIterator::FillFromLevel0() 114 0.0002858 0.0003571 0.0003896 0.00%
Amr::timeStep() 15 0.0002605 0.0003276 0.0003891 0.00%
HypreMultiABec::bCoefficients 294 0.0002912 0.0003305 0.0003756 0.00%
FabArray::FillBoundary() 181 0.0003142 0.0003233 0.0003432 0.00%
Amr::grid_places() 4 0.0001914 0.0002129 0.0002885 0.00%
Castro::finalize_do_advance() 15 0.0002381 0.0002504 0.0002639 0.00%
Castro::derive() 144 0.0001971 0.0002141 0.0002468 0.00%
TagBoxArray::mapPRD 4 0.0001912 0.0002041 0.0002134 0.00%
Radiation::deferred_sync_setup 5 9.781e-05 0.0001117 0.0001702 0.00%
HypreMultiABec::aCoefficients 98 0.0001345 0.0001482 0.000164 0.00%
Radiation::init_flux 10 3.525e-05 5.578e-05 0.0001549 0.00%
FabArrayBase::getFB() 181 0.0001271 0.0001401 0.0001501 0.00%
Castro::clean_state() 58 0.0001337 0.0001381 0.000147 0.00%
Castro::advance() 15 0.0001072 0.0001168 0.0001393 0.00%
Castro::post_init() 2 5.61e-05 8.982e-05 0.0001354 0.00%
FillPatchIterator::FillFromTwoLevels() 126 0.0001141 0.000121 0.0001285 0.00%
Castro::do_advance_ctu() 15 9.64e-05 0.000106 0.0001233 0.00%
FabSetT<MF>::linComb() 30 0.0001007 0.0001038 0.0001089 0.00%
FPinfo::FPinfo() 8 7.671e-05 9.191e-05 0.0001068 0.00%
Castro::errorEst() 4 7.291e-05 8.415e-05 9.607e-05 0.00%
Castro::subcycle_advance_ctu() 15 5.732e-05 7.175e-05 8.877e-05 0.00%
DistributionMapping::SFCProcessorMapDoIt() 3 6.155e-05 6.811e-05 7.641e-05 0.00%
FabArrayBase::TheFPinfo() 37 6.421e-05 6.908e-05 7.492e-05 0.00%
Castro::do_old_sources() 15 4.38e-05 5.057e-05 6.518e-05 0.00%
AmrLevel::AmrLevel(dm) 5 4.545e-05 5.282e-05 6.181e-05 0.00%
Radiation::pre_timestep 15 3.792e-05 4.136e-05 5.55e-05 0.00%
Castro::enforce_speed_limit() 58 3.189e-05 3.612e-05 4.471e-05 0.00%
RadSolve::levelBndry 15 1.644e-05 2.631e-05 4.465e-05 0.00%
Castro::avgDown(state_indx) 19 1.928e-05 3.267e-05 4.284e-05 0.00%
Castro::do_new_sources() 15 3.459e-05 3.888e-05 4.192e-05 0.00%
Amr::defBaseLevel() 1 3.036e-05 3.435e-05 4.008e-05 0.00%
Amr::writeSmallPlotFile() 1 3.678e-05 3.758e-05 3.939e-05 0.00%
Castro::expand_state() 15 3.034e-05 3.404e-05 3.804e-05 0.00%
Castro::estTimeStep() 32 2.779e-05 3.04e-05 3.441e-05 0.00%
Castro::create_source_corrector() 15 1.4e-05 1.659e-05 2.711e-05 0.00%
Castro::check_for_nan() 15 1.843e-05 2.049e-05 2.413e-05 0.00%
ClusterList::intersect() 0 0 2.98e-06 2.384e-05 0.00%
amrex::average_down_w_geom 19 7.358e-06 1.035e-05 2.264e-05 0.00%
Castro::post_regrid() 8 1.449e-05 1.945e-05 2.148e-05 0.00%
Castro::retry_advance_ctu() 15 1.308e-05 1.563e-05 1.824e-05 0.00%
Radiation::filBndry 10 1.443e-05 1.528e-05 1.571e-05 0.00%
Castro::computeNewDt() 6 7.672e-06 1.136e-05 1.518e-05 0.00%
Amr::bldFineLevels() 1 1.29e-05 1.4e-05 1.511e-05 0.00%
Castro::apply_problem_tags() 4 1.029e-05 1.324e-05 1.486e-05 0.00%
Amr::initSubcycle() 1 9.883e-06 1.11e-05 1.198e-05 0.00%
Amr::initialInit() 1 1.319e-06 3.254e-06 1.187e-05 0.00%
DistributionMapping::Distribute() 3 7.592e-06 8.344e-06 1.059e-05 0.00%
AmrMesh-cluster 0 0 1.302e-06 1.042e-05 0.00%
BoxList::parallelComplementIn() 8 3.263e-06 4.587e-06 1.029e-05 0.00%
Castro::avgDown() 6 5.643e-06 6.876e-06 7.657e-06 0.00%
Castro::init(old) 2 6.248e-06 6.793e-06 7.328e-06 0.00%
Amr::InitializeInit() 1 2.089e-06 2.906e-06 6.226e-06 0.00%
Castro::computeInitialDt() 2 2.703e-06 3.93e-06 4.62e-06 0.00%
BoxList::complementIn 8 2.526e-06 3.395e-06 4.093e-06 0.00%
Amr::init() 1 1.949e-06 2.15e-06 2.527e-06 0.00%
ClusterList::chop() 0 0 3.155e-07 2.524e-06 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 31.74 31.74 31.74 100.00%
Amr::coarseTimeStep() 5 29.47 29.47 29.47 92.86%
Amr::timeStep() 15 29.47 29.47 29.47 92.86%
Castro::advance() 15 29.32 29.32 29.32 92.38%
Radiation::single_group_update 15 27.84 27.88 27.93 87.99%
RadSolve::levelSolve 98 22.34 22.37 22.4 70.57%
HypreMultiABec::setupSolver 98 10.98 11 11.04 34.79%
HypreMultiABec::solve 98 8.556 8.596 8.617 27.15%
Amr::writePlotFile() 2 1.847 1.866 1.869 5.89%
Amr::init() 1 1.506 1.506 1.506 4.75%
Castro::derive() 144 1.372 1.379 1.393 4.39%
AmrLevel::derive() 144 1.372 1.378 1.392 4.39%
AmrLevel::FillPatch() 225 1.222 1.291 1.351 4.26%
Radiation::compute_eta 98 1.297 1.309 1.329 4.19%
FillPatchIterator::Initialize 240 1.132 1.23 1.319 4.16%
Castro::subcycle_advance_ctu() 15 1.004 1.036 1.063 3.35%
Castro::do_advance_ctu() 15 1.003 1.035 1.063 3.35%
Castro::initialize_do_advance() 15 0.801 0.8616 0.9205 2.90%
FillPatchSingleLevel 277 0.73 0.8274 0.914 2.88%
HypreMultiABec::clearSolver 98 0.8028 0.821 0.8431 2.66%
FabArray::ParallelCopy() 919 0.5988 0.7027 0.7971 2.51%
update_rosseland_from_temp 83 0.7725 0.7803 0.7862 2.48%
Radiation::get_planck_and_temp 98 0.7685 0.7725 0.7757 2.44%
FillPatchIterator::FillFromLevel0() 114 0.5777 0.6788 0.7661 2.41%
HypreMultiABec::loadMatrix 98 0.7114 0.7221 0.7341 2.31%
HypreMultiABec::finalizeMatrix 98 0.6544 0.6754 0.6935 2.19%
amrex::Copy() 1205 0.639 0.6596 0.6849 2.16%
Castro::expand_state() 15 0.555 0.6176 0.6792 2.14%
FabArray::setVal() 959 0.4074 0.5028 0.5951 1.87%
RadSolve::levelBCoeffs 98 0.4597 0.4672 0.4775 1.50%
Radiation::get_rosseland 15 0.3464 0.3926 0.4365 1.38%
Castro::initialize_advance() 15 0.3085 0.3711 0.4298 1.35%
HypreMultiABec::loadLevelVectors 98 0.4209 0.4235 0.4256 1.34%
FabArray::ParallelCopy_nowait() 919 0.3901 0.3989 0.4113 1.30%
FabArray::ParallelCopy_finish() 919 0.1876 0.3028 0.3995 1.26%
Amr::initialInit() 1 0.3755 0.3782 0.3971 1.25%
RadSolve::levelRhs 98 0.3761 0.3801 0.3859 1.22%
VisMF::Write(FabArray) 4 0.2797 0.3005 0.3495 1.10%
Amr::InitializeInit() 1 0.2922 0.2972 0.3009 0.95%
Amr::defBaseLevel() 1 0.2922 0.2972 0.3009 0.95%
RadSolve::levelFlux 98 0.2676 0.2825 0.299 0.94%
Radiation::compute_exchange 98 0.2642 0.2654 0.2701 0.85%
Castro::clean_state() 58 0.2509 0.2536 0.2558 0.81%
Castro::computeTemp() 76 0.2075 0.2105 0.2194 0.69%
RadSolve::levelFluxReg 98 0.1927 0.2017 0.2071 0.65%
Castro::Castro() 5 0.1799 0.1835 0.1861 0.59%
FillPatchIterator::FillFromTwoLevels() 126 0.1683 0.1704 0.1718 0.54%
FillPatchTwoLevels 126 0.1682 0.1703 0.1717 0.54%
FluxRegister::Reflux() 156 0.1503 0.1586 0.1669 0.53%
Castro::reset_internal_energy(MultiFab) 76 0.1443 0.1453 0.1467 0.46%
Castro::reset_internal_energy(Fab) 7294 0.1428 0.1438 0.1452 0.46%
FabArray::FillBoundary() 181 0.09506 0.1167 0.1345 0.42%
Castro::do_new_sources() 15 0.05406 0.08109 0.1068 0.34%
Radiation::internal_energy_update 98 0.09654 0.1024 0.106 0.33%
HypreMultiABec::vectorSetBoxValues 5362 0.09588 0.0992 0.1025 0.32%
RadSolve::levelACoeffs 98 0.09032 0.09371 0.1003 0.32%
Amr::FinalizeInit() 1 0.07464 0.081 0.09967 0.31%
Radiation::get_c_v 10625 0.09465 0.09484 0.09521 0.30%
Castro::post_timestep() 15 0.09039 0.09049 0.09056 0.29%
Amr::regrid() 3 0.08737 0.08832 0.08923 0.28%
FillBoundary_finish() 181 0.04526 0.06874 0.08629 0.27%
Castro::initData() 3 0.07026 0.07601 0.08038 0.25%
Radiation::scaledGradient 98 0.07533 0.07686 0.07914 0.25%
HypreMultiABec::finalizeVectors 98 0.06796 0.07273 0.07685 0.24%
HypreMultiABec::hmbc 8043 0.06712 0.06826 0.07081 0.22%
HypreMultiABec::bCoefficients 294 0.05199 0.06014 0.06866 0.22%
Amr::grid_places() 4 0.0562 0.06054 0.06602 0.21%
AmrMesh::MakeNewGrids() 4 0.05599 0.06033 0.06582 0.21%
Castro::initMFs() 5 0.05338 0.0556 0.06348 0.20%
StateDataPhysBCFunct::() 277 0.05794 0.05961 0.06329 0.20%
StateData::FillBoundary(geom) 962 0.0573 0.05897 0.06268 0.20%
Amr::bldFineLevels() 1 0.05173 0.0554 0.05991 0.19%
Radiation:fluxLimiter 98 0.05756 0.05856 0.05985 0.19%
Castro::do_old_sources() 15 0.04501 0.05172 0.05744 0.18%
Castro::normalize_species() 58 0.05492 0.05549 0.0557 0.18%
HypreMultiABec::hmmat3 1968 0.04869 0.05211 0.05552 0.17%
AmrLevel::AmrLevel(dm) 5 0.04661 0.04922 0.05283 0.17%
StateData::define() 15 0.04655 0.04916 0.05277 0.17%
FillBoundary_nowait() 181 0.04529 0.04768 0.04948 0.16%
Castro::post_regrid() 8 0.04486 0.04588 0.04626 0.15%
Castro::swap_state_time_levels() 15 0.04437 0.04478 0.0453 0.14%
Castro::errorEst() 4 0.04062 0.04177 0.04361 0.14%
Castro::volWgtSum() 36 0.03016 0.03209 0.03756 0.12%
HypreMultiABec::getSolution 98 0.03603 0.0362 0.03643 0.11%
Castro::buildMetrics() 5 0.02906 0.03133 0.03379 0.11%
HypreMultiABec::hmac 2681 0.03052 0.03067 0.03096 0.10%
HypreMultiABec::aCoefficients 98 0.02112 0.02394 0.02665 0.08%
FabArray::setDomainBndry() 277 0.02043 0.02236 0.02393 0.08%
Castro::enforce_min_density() 58 0.0216 0.02207 0.02315 0.07%
Castro::check_for_nan() 15 0.01692 0.0194 0.0217 0.07%
MultiFab::contains_nan() 15 0.0169 0.01938 0.02168 0.07%
HypreMultiABec::getAbsoluteResidual 98 0.0199 0.02017 0.02034 0.06%
Radiation::getBndryData 15 0.008637 0.01131 0.02034 0.06%
HypreMultiABec::boundaryFlux 98 0.0182 0.01863 0.0189 0.06%
HypreMultiABec::vectorGetBoxValues 2681 0.01715 0.01732 0.01752 0.06%
Castro::post_init() 2 0.01435 0.01468 0.0162 0.05%
TagBoxArray::mapPRD 4 0.003356 0.00661 0.01057 0.03%
Castro::apply_tagging_restrictions() 4 0.008397 0.008657 0.009557 0.03%
AMRErrorTag::operator() 4 0.007945 0.008497 0.009239 0.03%
FillPatchInterp(MF) 37 0.0006044 0.00594 0.008836 0.03%
Castro::init(old) 2 0.005407 0.005439 0.005509 0.02%
FabArrayBase::getCPC() 742 0.0048 0.00514 0.005345 0.02%
Castro::finalize_do_advance() 15 0.004292 0.004505 0.004961 0.02%
FabArrayBase::CPC::define() 165 0.003012 0.00333 0.003459 0.01%
Radiation::pre_timestep 15 0.002446 0.002641 0.002989 0.01%
Radiation::init_flux 10 0.002406 0.0026 0.002947 0.01%
FabArrayBase::TheFPinfo() 37 0.0005533 0.001844 0.00283 0.01%
FPinfo::FPinfo() 8 0.0004891 0.001775 0.002759 0.01%
DistributionMapping::LeastUsedCPUs() 11 0.0004943 0.001751 0.002737 0.01%
Castro::enforce_consistent_e() 3 0.002067 0.002267 0.002348 0.01%
Radiation::Regrid 5 0.001826 0.001999 0.002294 0.01%
Radiation::filBndry 10 0.001273 0.001363 0.001419 0.00%
Castro::build_fine_mask() 18 0.0009581 0.001242 0.00137 0.00%
TagBoxArray::collate() 4 0.0002549 0.0008987 0.001165 0.00%
Castro::avgDown() 6 0.0009533 0.0009875 0.001012 0.00%
FabSetT<MF>::linComb() 30 0.0009029 0.0009508 0.001011 0.00%
Castro::avgDown(state_indx) 19 0.0009513 0.0009844 0.001008 0.00%
amrex::average_down_w_geom 19 0.00092 0.0009517 0.0009731 0.00%
amrex::average_down 19 0.0009114 0.0009414 0.0009649 0.00%
OwnerMask() 4 0.0008236 0.0008732 0.0009508 0.00%
Castro::finalize_advance() 15 0.0005431 0.0006759 0.0009058 0.00%
FabArrayBase::getFB() 181 0.0008087 0.0008337 0.0008926 0.00%
FabArrayBase::FB::FB() 27 0.0006646 0.0006937 0.0007517 0.00%
Amr::InitAmr() 1 0.000556 0.0005675 0.0005782 0.00%
Radiation::deferred_sync_setup 5 9.781e-05 0.0001117 0.0001702 0.00%
DistributionMapping::SFCProcessorMapDoIt() 3 8.838e-05 0.0001443 0.0001606 0.00%
Castro::enforce_speed_limit() 58 3.189e-05 3.612e-05 4.471e-05 0.00%
RadSolve::levelBndry 15 1.644e-05 2.631e-05 4.465e-05 0.00%
Amr::writeSmallPlotFile() 1 3.678e-05 3.758e-05 3.939e-05 0.00%
AmrMesh-cluster 0 0 4.598e-06 3.678e-05 0.00%
Castro::estTimeStep() 32 2.779e-05 3.04e-05 3.441e-05 0.00%
Castro::create_source_corrector() 15 1.4e-05 1.659e-05 2.711e-05 0.00%
ClusterList::intersect() 0 0 2.98e-06 2.384e-05 0.00%
Castro::computeNewDt() 6 1.6e-05 1.989e-05 2.364e-05 0.00%
Castro::retry_advance_ctu() 15 1.308e-05 1.563e-05 1.824e-05 0.00%
Castro::apply_problem_tags() 4 1.029e-05 1.324e-05 1.486e-05 0.00%
BoxList::parallelComplementIn() 8 6.259e-06 7.982e-06 1.281e-05 0.00%
Amr::initSubcycle() 1 9.883e-06 1.11e-05 1.198e-05 0.00%
DistributionMapping::Distribute() 3 7.592e-06 8.344e-06 1.059e-05 0.00%
Castro::computeInitialDt() 2 2.703e-06 3.93e-06 4.62e-06 0.00%
BoxList::complementIn 8 2.526e-06 3.395e-06 4.093e-06 0.00%
ClusterList::chop() 0 0 3.155e-07 2.524e-06 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::castro.gravity(nvals = 1) :: [0]
[TOP]::habec.verbose(nvals = 1) :: [1]
Pinned Memory Usage:
---------------------------------------------------------------------------------------------------------------------
Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max
---------------------------------------------------------------------------------------------------------------------
The_Pinned_Arena::Initialize() 8 8 3 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB
---------------------------------------------------------------------------------------------------------------------
AMReX (23.08-19-ge7d3d5a4fad6) finalized