MPI initialized with 4 MPI processes
MPI initialized with thread support level 3
AMReX (23.08-22-g346a4d1c915f) initialized
Starting run at 07:08:41 UTC on 2023-08-08.
Successfully read inputs file ...
Castro git describe: 23.08
AMReX git describe: 23.08-22-g346a4d1c9
Microphysics git describe: 23.08-3-g3d2714f8
reading extern runtime parameters ...
2 Species:
A B
Successfully read inputs file ...
Initializing the data at level 0
Done initializing the level 0 data
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
TIME= 0 MASS = 1
TIME= 0 XMOM = 1
TIME= 0 YMOM = 1
TIME= 0 ZMOM = 1
TIME= 0 ANG MOM X = 0
TIME= 0 ANG MOM Y = 0
TIME= 0 ANG MOM Z = 0
TIME= 0 RHO*e = 2.5
TIME= 0 RHO*K = 1.5
TIME= 0 RHO*E = 4
TIME= 0 CENTER OF MASS X-LOC = 0.5
TIME= 0 CENTER OF MASS X-VEL = 1
TIME= 0 CENTER OF MASS Y-LOC = 0.5
TIME= 0 CENTER OF MASS Y-VEL = 1
TIME= 0 CENTER OF MASS Z-LOC = 0.5
TIME= 0 CENTER OF MASS Z-VEL = 1
TIME= 0 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0 MAXIMUM DENSITY = 1
INITIAL GRIDS
Level 0 4 grids 262144 cells 100 % of domain
smallest grid: 64 x 32 x 32 biggest grid: 64 x 32 x 32
PLOTFILE: file = species-mhd_plt00000
Write plotfile time = 0.015684969 seconds
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[Level 0 step 1] ADVANCE at time 0 with dt = 0.0006441185975
[1m[32m Beginning subcycle 1 starting at time 0 with dt = 0.0006441185975[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.030436844 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.041875777 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1308840653
[Level 0 step 1] Advanced 262144 cells
TIME= 0.0006441185975 MASS = 1
TIME= 0.0006441185975 XMOM = 1
TIME= 0.0006441185975 YMOM = 1
TIME= 0.0006441185975 ZMOM = 1
TIME= 0.0006441185975 ANG MOM X = 0
TIME= 0.0006441185975 ANG MOM Y = 0
TIME= 0.0006441185975 ANG MOM Z = 0
TIME= 0.0006441185975 RHO*e = 2.5
TIME= 0.0006441185975 RHO*K = 1.5
TIME= 0.0006441185975 RHO*E = 4
TIME= 0.0006441185975 CENTER OF MASS X-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS X-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Y-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Y-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Z-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Z-VEL = 1
TIME= 0.0006441185975 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.0006441185975 MAXIMUM DENSITY = 1
[STEP 1] Coarse TimeStep time: 2.015014046
[STEP 1] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 1 TIME = 0.0006441185975 DT = 0.0006441185975
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0006763245274 = 1.05 * 0.0006441185975
[Level 0 step 2] ADVANCE at time 0.0006441185975 with dt = 0.0006763245274
[1m[32m Beginning subcycle 1 starting at time 0.0006441185975 with dt = 0.0006763245274[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.022657473 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.025275203 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1345905052
[Level 0 step 2] Advanced 262144 cells
TIME= 0.001320443125 MASS = 1
TIME= 0.001320443125 XMOM = 1
TIME= 0.001320443125 YMOM = 1
TIME= 0.001320443125 ZMOM = 1
TIME= 0.001320443125 ANG MOM X = 0
TIME= 0.001320443125 ANG MOM Y = 0
TIME= 0.001320443125 ANG MOM Z = 0
TIME= 0.001320443125 RHO*e = 2.5
TIME= 0.001320443125 RHO*K = 1.5
TIME= 0.001320443125 RHO*E = 4
TIME= 0.001320443125 CENTER OF MASS X-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS X-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Y-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Y-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Z-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Z-VEL = 1
TIME= 0.001320443125 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.001320443125 MAXIMUM DENSITY = 1
[STEP 2] Coarse TimeStep time: 1.9619244
[STEP 2] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 2 TIME = 0.001320443125 DT = 0.0006763245274
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007101407537 = 1.05 * 0.0006763245274
[Level 0 step 3] ADVANCE at time 0.001320443125 with dt = 0.0007101407537
[1m[32m Beginning subcycle 1 starting at time 0.001320443125 with dt = 0.0007101407537[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.018738111 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.014824184 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1372611352
[Level 0 step 3] Advanced 262144 cells
TIME= 0.002030583879 MASS = 1
TIME= 0.002030583879 XMOM = 1
TIME= 0.002030583879 YMOM = 1
TIME= 0.002030583879 ZMOM = 1
TIME= 0.002030583879 ANG MOM X = 0
TIME= 0.002030583879 ANG MOM Y = 0
TIME= 0.002030583879 ANG MOM Z = 0
TIME= 0.002030583879 RHO*e = 2.5
TIME= 0.002030583879 RHO*K = 1.5
TIME= 0.002030583879 RHO*E = 4
TIME= 0.002030583879 CENTER OF MASS X-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS X-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Y-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Y-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Z-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Z-VEL = 1
TIME= 0.002030583879 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.002030583879 MAXIMUM DENSITY = 1
[STEP 3] Coarse TimeStep time: 1.923402731
[STEP 3] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 3 TIME = 0.002030583879 DT = 0.0007101407537
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007456477914 = 1.05 * 0.0007101407537
[Level 0 step 4] ADVANCE at time 0.002030583879 with dt = 0.0007456477914
[1m[32m Beginning subcycle 1 starting at time 0.002030583879 with dt = 0.0007456477914[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.018623291 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.016261836 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1357625801
[Level 0 step 4] Advanced 262144 cells
TIME= 0.00277623167 MASS = 1
TIME= 0.00277623167 XMOM = 1
TIME= 0.00277623167 YMOM = 1
TIME= 0.00277623167 ZMOM = 1
TIME= 0.00277623167 ANG MOM X = 0
TIME= 0.00277623167 ANG MOM Y = 0
TIME= 0.00277623167 ANG MOM Z = 0
TIME= 0.00277623167 RHO*e = 2.5
TIME= 0.00277623167 RHO*K = 1.5
TIME= 0.00277623167 RHO*E = 4
TIME= 0.00277623167 CENTER OF MASS X-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS X-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Y-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Y-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Z-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Z-VEL = 1
TIME= 0.00277623167 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.00277623167 MAXIMUM DENSITY = 1
[STEP 4] Coarse TimeStep time: 1.944440102
[STEP 4] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 4 TIME = 0.00277623167 DT = 0.0007456477914
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.000782930181 = 1.05 * 0.0007456477914
[Level 0 step 5] ADVANCE at time 0.00277623167 with dt = 0.000782930181
[1m[32m Beginning subcycle 1 starting at time 0.00277623167 with dt = 0.000782930181[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.017926669 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.024536379 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1416702438
[Level 0 step 5] Advanced 262144 cells
TIME= 0.003559161851 MASS = 1
TIME= 0.003559161851 XMOM = 1
TIME= 0.003559161851 YMOM = 1
TIME= 0.003559161851 ZMOM = 1
TIME= 0.003559161851 ANG MOM X = 0
TIME= 0.003559161851 ANG MOM Y = 0
TIME= 0.003559161851 ANG MOM Z = 0
TIME= 0.003559161851 RHO*e = 2.5
TIME= 0.003559161851 RHO*K = 1.5
TIME= 0.003559161851 RHO*E = 4
TIME= 0.003559161851 CENTER OF MASS X-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS X-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Y-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Y-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Z-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Z-VEL = 1
TIME= 0.003559161851 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.003559161851 MAXIMUM DENSITY = 1
[STEP 5] Coarse TimeStep time: 1.867999638
[STEP 5] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 5 TIME = 0.003559161851 DT = 0.000782930181
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.00082207669 = 1.05 * 0.000782930181
[Level 0 step 6] ADVANCE at time 0.003559161851 with dt = 0.00082207669
[1m[32m Beginning subcycle 1 starting at time 0.003559161851 with dt = 0.00082207669[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.020897635 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.014749018 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.145013601
[Level 0 step 6] Advanced 262144 cells
TIME= 0.004381238541 MASS = 1
TIME= 0.004381238541 XMOM = 1
TIME= 0.004381238541 YMOM = 1
TIME= 0.004381238541 ZMOM = 1
TIME= 0.004381238541 ANG MOM X = 0
TIME= 0.004381238541 ANG MOM Y = 0
TIME= 0.004381238541 ANG MOM Z = 0
TIME= 0.004381238541 RHO*e = 2.5
TIME= 0.004381238541 RHO*K = 1.5
TIME= 0.004381238541 RHO*E = 4
TIME= 0.004381238541 CENTER OF MASS X-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS X-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Y-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Y-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Z-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Z-VEL = 1
TIME= 0.004381238541 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.004381238541 MAXIMUM DENSITY = 1
[STEP 6] Coarse TimeStep time: 1.819331259
[STEP 6] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 6 TIME = 0.004381238541 DT = 0.00082207669
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0008631805245 = 1.05 * 0.00082207669
[Level 0 step 7] ADVANCE at time 0.004381238541 with dt = 0.0008631805245
[1m[32m Beginning subcycle 1 starting at time 0.004381238541 with dt = 0.0008631805245[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.015391343 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.01246518 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1462423014
[Level 0 step 7] Advanced 262144 cells
TIME= 0.005244419066 MASS = 1
TIME= 0.005244419066 XMOM = 1
TIME= 0.005244419066 YMOM = 1
TIME= 0.005244419066 ZMOM = 1
TIME= 0.005244419066 ANG MOM X = 0
TIME= 0.005244419066 ANG MOM Y = 0
TIME= 0.005244419066 ANG MOM Z = 0
TIME= 0.005244419066 RHO*e = 2.5
TIME= 0.005244419066 RHO*K = 1.5
TIME= 0.005244419066 RHO*E = 4
TIME= 0.005244419066 CENTER OF MASS X-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS X-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Y-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Y-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Z-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Z-VEL = 1
TIME= 0.005244419066 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.005244419066 MAXIMUM DENSITY = 1
[STEP 7] Coarse TimeStep time: 1.826652303
[STEP 7] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 7 TIME = 0.005244419066 DT = 0.0008631805245
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009063395508 = 1.05 * 0.0008631805245
[Level 0 step 8] ADVANCE at time 0.005244419066 with dt = 0.0009063395508
[1m[32m Beginning subcycle 1 starting at time 0.005244419066 with dt = 0.0009063395508[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.016073983 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.01235585 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1460048836
[Level 0 step 8] Advanced 262144 cells
TIME= 0.006150758616 MASS = 1
TIME= 0.006150758616 XMOM = 1
TIME= 0.006150758616 YMOM = 1
TIME= 0.006150758616 ZMOM = 1
TIME= 0.006150758616 ANG MOM X = 0
TIME= 0.006150758616 ANG MOM Y = 0
TIME= 0.006150758616 ANG MOM Z = 0
TIME= 0.006150758616 RHO*e = 2.5
TIME= 0.006150758616 RHO*K = 1.5
TIME= 0.006150758616 RHO*E = 4
TIME= 0.006150758616 CENTER OF MASS X-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS X-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Y-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Y-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Z-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Z-VEL = 1
TIME= 0.006150758616 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.006150758616 MAXIMUM DENSITY = 1
[STEP 8] Coarse TimeStep time: 1.807117995
[STEP 8] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 8 TIME = 0.006150758616 DT = 0.0009063395508
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009516565283 = 1.05 * 0.0009063395508
[Level 0 step 9] ADVANCE at time 0.006150758616 with dt = 0.0009516565283
[1m[32m Beginning subcycle 1 starting at time 0.006150758616 with dt = 0.0009516565283[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.015163217 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.012560498 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1465747746
[Level 0 step 9] Advanced 262144 cells
TIME= 0.007102415145 MASS = 1
TIME= 0.007102415145 XMOM = 1
TIME= 0.007102415145 YMOM = 1
TIME= 0.007102415145 ZMOM = 1
TIME= 0.007102415145 ANG MOM X = 0
TIME= 0.007102415145 ANG MOM Y = 0
TIME= 0.007102415145 ANG MOM Z = 0
TIME= 0.007102415145 RHO*e = 2.5
TIME= 0.007102415145 RHO*K = 1.5
TIME= 0.007102415145 RHO*E = 4
TIME= 0.007102415145 CENTER OF MASS X-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS X-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Y-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Y-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Z-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Z-VEL = 1
TIME= 0.007102415145 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.007102415145 MAXIMUM DENSITY = 1
[STEP 9] Coarse TimeStep time: 1.800124544
[STEP 9] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 9 TIME = 0.007102415145 DT = 0.0009516565283
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009992393547 = 1.05 * 0.0009516565283
[Level 0 step 10] ADVANCE at time 0.007102415145 with dt = 0.0009992393547
[1m[32m Beginning subcycle 1 starting at time 0.007102415145 with dt = 0.0009992393547[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.015523273 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.012416012 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1461370003
[Level 0 step 10] Advanced 262144 cells
TIME= 0.008101654499 MASS = 1
TIME= 0.008101654499 XMOM = 1
TIME= 0.008101654499 YMOM = 1
TIME= 0.008101654499 ZMOM = 1
TIME= 0.008101654499 ANG MOM X = 0
TIME= 0.008101654499 ANG MOM Y = 0
TIME= 0.008101654499 ANG MOM Z = 0
TIME= 0.008101654499 RHO*e = 2.5
TIME= 0.008101654499 RHO*K = 1.5
TIME= 0.008101654499 RHO*E = 4
TIME= 0.008101654499 CENTER OF MASS X-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS X-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Y-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Y-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Z-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Z-VEL = 1
TIME= 0.008101654499 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.008101654499 MAXIMUM DENSITY = 1
[STEP 10] Coarse TimeStep time: 1.84259872
[STEP 10] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 10 TIME = 0.008101654499 DT = 0.0009992393547
PLOTFILE: file = species-mhd_plt00010
Write plotfile time = 0.011442487 seconds
Ending run at 07:09:00 UTC on 2023-08-08.
Run time = 18.91083077
Run time without initialization = 18.82988879
Average number of zones advanced per microsecond: 0.139
Average number of zones advanced per microsecond per rank: 0.035
TinyProfiler total time across processes [min...avg...max]: 18.91 ... 18.91 ... 18.91
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
Castro::do_advance_ctu() 10 16.9715 17.2876 17.4670 92.36%
check_for_negative_density() 10 0.1006 0.2805 0.5903 3.12%
FabArray::ParallelCopy_finish() 148 0.2189 0.2346 0.2508 1.33%
FabArray::ParallelCopy_nowait() 148 0.1091 0.1167 0.1208 0.64%
FillPatchIterator::Initialize 148 0.1161 0.1167 0.1175 0.62%
Castro::reset_internal_energy(Fab) 1008 0.114 0.1152 0.1165 0.62%
FabArray::setVal() 137 0.07612 0.08847 0.1086 0.57%
Castro::estTimeStep() 21 0.07475 0.08063 0.0848 0.45%
amrex::Copy() 196 0.07228 0.07593 0.08006 0.42%
Castro::sum_integrated_quantities() 11 0.01046 0.03188 0.07919 0.42%
Castro::initialize_do_advance() 10 0.06825 0.07087 0.07729 0.41%
Amr::coarseTimeStep() 10 0.000676 0.04567 0.06068 0.32%
Castro::normalize_species() 62 0.05157 0.05204 0.0526 0.28%
FabArray::Saxpy() 50 0.03553 0.03945 0.04138 0.22%
Castro::finalize_do_advance() 10 0.03657 0.03828 0.03922 0.21%
Castro::construct_new_source() 40 0.0303 0.03165 0.0355 0.19%
Castro::computeTemp() 63 0.02664 0.02705 0.02733 0.14%
Castro::initialize_advance() 10 0.01323 0.01664 0.0228 0.12%
Castro::construct_old_source() 40 0.01719 0.01817 0.01858 0.10%
VisMF::Write(FabArray) 2 0.01382 0.01509 0.01839 0.10%
AmrLevel::derive() 44 0.01338 0.01488 0.01768 0.09%
Castro::volWgtSum() 132 0.01348 0.01401 0.01486 0.08%
Castro::initMFs() 1 0.01255 0.01313 0.01469 0.08%
MultiFab::contains_nan() 20 0.01294 0.01359 0.01404 0.07%
StateData::define() 5 0.0115 0.01199 0.0133 0.07%
Amr::writePlotFile() 2 0.007047 0.01042 0.01177 0.06%
Castro::swap_state_time_levels() 10 0.008721 0.009046 0.009991 0.05%
Castro::enforce_min_density() 62 0.009437 0.009752 0.009958 0.05%
main() 1 0.008426 0.008835 0.009262 0.05%
Castro::do_old_sources() 10 0.0003442 0.003176 0.009109 0.05%
Castro::do_new_sources() 10 0.0003305 0.001513 0.004577 0.02%
Castro::buildMetrics() 1 0.003735 0.003908 0.00439 0.02%
Castro::initData() 1 0.002933 0.003106 0.003578 0.02%
Castro::locWgtSum() 33 0.003117 0.003234 0.0033 0.02%
AmrLevel::FillPatch() 138 0.001661 0.001869 0.002044 0.01%
Castro::finalize_advance() 10 0.001329 0.00143 0.001551 0.01%
Castro::subcycle_advance_ctu() 10 6.867e-05 0.0002508 0.0007832 0.00%
Castro::reset_internal_energy(MultiFab) 63 0.0004692 0.0004868 0.0004936 0.00%
Castro::enforce_consistent_e() 1 0.0003547 0.0003982 0.0004354 0.00%
Amr::InitAmr() 1 0.0002762 0.000326 0.0003873 0.00%
Castro::computeNewDt() 9 1.709e-05 7.805e-05 0.0002581 0.00%
FabArrayBase::getCPC() 148 0.0001479 0.0001802 0.0002056 0.00%
FillPatchIterator::FillFromLevel0() 148 0.0001686 0.0001729 0.0001789 0.00%
FabArray::ParallelCopy() 148 0.0001603 0.0001659 0.0001752 0.00%
Castro::clean_state() 62 0.0001468 0.0001622 0.0001721 0.00%
FabArrayBase::CPC::define() 6 0.0001268 0.0001371 0.0001493 0.00%
StateDataPhysBCFunct::() 148 0.0001432 0.000146 0.0001485 0.00%
FabArray::setDomainBndry() 148 0.0001206 0.0001291 0.0001334 0.00%
FillPatchSingleLevel 148 0.000125 0.0001265 0.0001291 0.00%
DistributionMapping::LeastUsedCPUs() 1 6.696e-06 6.099e-05 0.0001071 0.00%
Amr::timeStep() 10 7.344e-05 8.308e-05 0.000105 0.00%
Amr::FinalizeInit() 1 5.417e-06 1.709e-05 4.953e-05 0.00%
Amr::writeSmallPlotFile() 1 2.738e-05 3.895e-05 4.896e-05 0.00%
Castro::derive() 44 3.691e-05 4.25e-05 4.729e-05 0.00%
Castro::advance() 10 4.028e-05 4.241e-05 4.5e-05 0.00%
Castro::enforce_speed_limit() 62 3.283e-05 3.483e-05 3.777e-05 0.00%
Castro::apply_source_to_state() 20 2.962e-05 3.218e-05 3.512e-05 0.00%
Castro::check_for_nan() 20 2.438e-05 2.533e-05 2.627e-05 0.00%
Castro::post_timestep() 10 2.136e-05 2.229e-05 2.373e-05 0.00%
Amr::defBaseLevel() 1 1.293e-05 1.726e-05 2.309e-05 0.00%
Castro::expand_state() 10 1.884e-05 2.157e-05 2.281e-05 0.00%
Castro::Castro() 1 2.035e-05 2.113e-05 2.257e-05 0.00%
AmrLevel::AmrLevel(dm) 1 1.89e-05 2.007e-05 2.237e-05 0.00%
Amr::init() 1 2.556e-06 1.237e-05 1.849e-05 0.00%
Castro::create_source_corrector() 10 8.746e-06 1.128e-05 1.681e-05 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 3.362e-06 6.485e-06 1.193e-05 0.00%
Amr::initSubcycle() 1 8.675e-06 9.382e-06 1.077e-05 0.00%
Castro::FluxRegCrseInit 10 7.916e-06 9.341e-06 1.025e-05 0.00%
Castro::retry_advance_ctu() 10 8.367e-06 9.009e-06 9.687e-06 0.00%
Castro::computeInitialDt() 2 4.106e-06 4.857e-06 5.413e-06 0.00%
Amr::InitializeInit() 1 1.859e-06 2.844e-06 4.996e-06 0.00%
Castro::post_regrid() 1 2.65e-06 3.333e-06 3.939e-06 0.00%
Castro::FluxRegFineAdd() 10 2.799e-06 3.283e-06 3.653e-06 0.00%
Castro::post_init() 1 1.642e-06 2.049e-06 2.401e-06 0.00%
Amr::initialInit() 1 1.735e-06 1.984e-06 2.107e-06 0.00%
DistributionMapping::Distribute() 1 7.7e-07 8.707e-07 9.78e-07 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 18.91 18.91 18.91 100.00%
Amr::coarseTimeStep() 10 18.82 18.82 18.82 99.52%
Amr::timeStep() 10 18.71 18.73 18.77 99.27%
Castro::advance() 10 18.62 18.62 18.62 98.46%
Castro::subcycle_advance_ctu() 10 18.51 18.52 18.52 97.96%
Castro::do_advance_ctu() 10 18.51 18.52 18.52 97.96%
check_for_negative_density() 10 0.1006 0.2805 0.5903 3.12%
FillPatchIterator::Initialize 148 0.4451 0.4691 0.4868 2.57%
Castro::initialize_do_advance() 10 0.4546 0.4612 0.4693 2.48%
AmrLevel::FillPatch() 138 0.4452 0.4567 0.4675 2.47%
FillPatchIterator::FillFromLevel0() 148 0.3289 0.3523 0.3699 1.96%
FillPatchSingleLevel 148 0.3287 0.3521 0.3697 1.95%
FabArray::ParallelCopy() 148 0.3285 0.3518 0.3694 1.95%
Castro::expand_state() 10 0.2616 0.2641 0.2687 1.42%
FabArray::ParallelCopy_finish() 148 0.2189 0.2346 0.2508 1.33%
Castro::clean_state() 62 0.2008 0.2026 0.2042 1.08%
Castro::do_new_sources() 10 0.1815 0.1835 0.187 0.99%
Castro::do_old_sources() 10 0.1798 0.1814 0.1834 0.97%
Castro::post_timestep() 10 0.09526 0.11 0.1533 0.81%
Castro::computeTemp() 63 0.1411 0.1427 0.1443 0.76%
Castro::sum_integrated_quantities() 11 0.07714 0.09252 0.1361 0.72%
Castro::construct_new_source() 40 0.1083 0.1246 0.1346 0.71%
FabArray::ParallelCopy_nowait() 148 0.1094 0.117 0.1211 0.64%
Castro::reset_internal_energy(MultiFab) 63 0.1145 0.1157 0.117 0.62%
Castro::reset_internal_energy(Fab) 1008 0.114 0.1152 0.1165 0.62%
FabArray::setVal() 137 0.07612 0.08847 0.1086 0.57%
Castro::initialize_advance() 10 0.08789 0.0929 0.09813 0.52%
Castro::estTimeStep() 21 0.07475 0.08063 0.0848 0.45%
Amr::init() 1 0.08042 0.08047 0.08052 0.43%
amrex::Copy() 196 0.07228 0.07593 0.08006 0.42%
Castro::finalize_do_advance() 10 0.07074 0.07586 0.07979 0.42%
Amr::initialInit() 1 0.06455 0.06458 0.06461 0.34%
Castro::normalize_species() 62 0.05157 0.05204 0.0526 0.28%
Castro::derive() 44 0.03976 0.04339 0.04852 0.26%
AmrLevel::derive() 44 0.03972 0.04335 0.04849 0.26%
Amr::InitializeInit() 1 0.04161 0.0432 0.04692 0.25%
Amr::defBaseLevel() 1 0.04161 0.0432 0.04692 0.25%
FabArray::Saxpy() 50 0.03553 0.03945 0.04138 0.22%
Castro::computeNewDt() 9 0.03137 0.03146 0.0317 0.17%
Castro::construct_old_source() 40 0.02789 0.03006 0.03107 0.16%
Amr::writePlotFile() 2 0.02734 0.02741 0.02744 0.15%
Amr::FinalizeInit() 1 0.01765 0.02138 0.023 0.12%
Castro::Castro() 1 0.0193 0.02001 0.02162 0.11%
VisMF::Write(FabArray) 2 0.01382 0.01509 0.01839 0.10%
Castro::apply_source_to_state() 20 0.01474 0.01599 0.01664 0.09%
Castro::volWgtSum() 132 0.01348 0.01401 0.01486 0.08%
Castro::initMFs() 1 0.01255 0.01313 0.01469 0.08%
Castro::check_for_nan() 20 0.01296 0.01362 0.01407 0.07%
MultiFab::contains_nan() 20 0.01294 0.01359 0.01404 0.07%
AmrLevel::AmrLevel(dm) 1 0.01153 0.01201 0.01332 0.07%
Castro::computeInitialDt() 2 0.007965 0.01168 0.01331 0.07%
StateData::define() 5 0.0115 0.01199 0.0133 0.07%
Castro::initData() 1 0.01064 0.01109 0.01187 0.06%
Castro::post_init() 1 0.009937 0.01032 0.01047 0.06%
Castro::swap_state_time_levels() 10 0.008721 0.009046 0.009991 0.05%
Castro::enforce_min_density() 62 0.009437 0.009752 0.009958 0.05%
Castro::finalize_advance() 10 0.004646 0.005789 0.008976 0.05%
Castro::buildMetrics() 1 0.004032 0.004234 0.004759 0.03%
Castro::post_regrid() 1 0.002879 0.003044 0.003413 0.02%
Castro::locWgtSum() 33 0.003117 0.003234 0.0033 0.02%
Castro::enforce_consistent_e() 1 0.0003547 0.0003982 0.0004354 0.00%
Amr::InitAmr() 1 0.0002854 0.0003354 0.0003962 0.00%
FabArrayBase::getCPC() 148 0.0002867 0.0003172 0.000339 0.00%
FabArrayBase::CPC::define() 6 0.0001268 0.0001371 0.0001493 0.00%
StateDataPhysBCFunct::() 148 0.0001432 0.000146 0.0001485 0.00%
FabArray::setDomainBndry() 148 0.0001206 0.0001291 0.0001334 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 1.083e-05 6.835e-05 0.0001145 0.00%
DistributionMapping::LeastUsedCPUs() 1 6.696e-06 6.099e-05 0.0001071 0.00%
Amr::writeSmallPlotFile() 1 2.738e-05 3.895e-05 4.896e-05 0.00%
Castro::enforce_speed_limit() 62 3.283e-05 3.483e-05 3.777e-05 0.00%
Castro::create_source_corrector() 10 8.746e-06 1.128e-05 1.681e-05 0.00%
Amr::initSubcycle() 1 8.675e-06 9.382e-06 1.077e-05 0.00%
Castro::FluxRegCrseInit 10 7.916e-06 9.341e-06 1.025e-05 0.00%
Castro::retry_advance_ctu() 10 8.367e-06 9.009e-06 9.687e-06 0.00%
Castro::FluxRegFineAdd() 10 2.799e-06 3.283e-06 3.653e-06 0.00%
DistributionMapping::Distribute() 1 7.7e-07 8.707e-07 9.78e-07 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2]
Pinned Memory Usage:
---------------------------------------------------------------------------------------------------------------------
Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max
---------------------------------------------------------------------------------------------------------------------
The_Pinned_Arena::Initialize() 4 4 6 B 6 B 6 B 8192 KiB 8192 KiB 8192 KiB
---------------------------------------------------------------------------------------------------------------------
AMReX (23.08-22-g346a4d1c915f) finalized