Initializing AMReX (v2024-42-g7437aa17d36f)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 3
AMReX (v2024-42-g7437aa17d36f) initialized
Starting run at 18:47:55 UTC on 2024-03-28.
Successfully read inputs file ...
Castro git describe: 24.03-37-g6b90dd1c0
AMReX git describe: v2024-42-g7437aa17d
Microphysics git describe: 24.03-23-g3112c13a
reading extern runtime parameters ...
2 Species:
A B
Successfully read inputs file ...
Initializing the data at level 0
Done initializing the level 0 data
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
TIME= 0 MASS = 1
TIME= 0 XMOM = 1
TIME= 0 YMOM = 1
TIME= 0 ZMOM = 1
TIME= 0 ANG MOM X = 0
TIME= 0 ANG MOM Y = 0
TIME= 0 ANG MOM Z = 0
TIME= 0 RHO*e = 2.5
TIME= 0 RHO*K = 1.5
TIME= 0 RHO*E = 4
TIME= 0 CENTER OF MASS X-LOC = 0.5
TIME= 0 CENTER OF MASS X-VEL = 1
TIME= 0 CENTER OF MASS Y-LOC = 0.5
TIME= 0 CENTER OF MASS Y-VEL = 1
TIME= 0 CENTER OF MASS Z-LOC = 0.5
TIME= 0 CENTER OF MASS Z-VEL = 1
TIME= 0 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0 MAXIMUM DENSITY = 1
INITIAL GRIDS
Level 0 4 grids 262144 cells 100 % of domain
smallest grid: 64 x 32 x 32 biggest grid: 64 x 32 x 32
PLOTFILE: file = species-mhd_plt00000
Write plotfile time = 0.015194367 seconds
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[Level 0 step 1] ADVANCE at time 0 with dt = 0.0006441185975
[1m[32m Beginning subcycle 1 starting at time 0 with dt = 0.0006441185975[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.028012502 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.028812137 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1346335333
[Level 0 step 1] Advanced 262144 cells
TIME= 0.0006441185975 MASS = 1
TIME= 0.0006441185975 XMOM = 1
TIME= 0.0006441185975 YMOM = 1
TIME= 0.0006441185975 ZMOM = 1
TIME= 0.0006441185975 ANG MOM X = 0
TIME= 0.0006441185975 ANG MOM Y = 0
TIME= 0.0006441185975 ANG MOM Z = 0
TIME= 0.0006441185975 RHO*e = 2.5
TIME= 0.0006441185975 RHO*K = 1.5
TIME= 0.0006441185975 RHO*E = 4
TIME= 0.0006441185975 CENTER OF MASS X-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS X-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Y-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Y-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Z-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Z-VEL = 1
TIME= 0.0006441185975 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.0006441185975 MAXIMUM DENSITY = 1
[STEP 1] Coarse TimeStep time: 1.984935872
[STEP 1] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 1 TIME = 0.0006441185975 DT = 0.0006441185975
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0006763245274 = 1.05 * 0.0006441185975
[Level 0 step 2] ADVANCE at time 0.0006441185975 with dt = 0.0006763245274
[1m[32m Beginning subcycle 1 starting at time 0.0006441185975 with dt = 0.0006763245274[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.018771053 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.019584373 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1384587317
[Level 0 step 2] Advanced 262144 cells
TIME= 0.001320443125 MASS = 1
TIME= 0.001320443125 XMOM = 1
TIME= 0.001320443125 YMOM = 1
TIME= 0.001320443125 ZMOM = 1
TIME= 0.001320443125 ANG MOM X = 0
TIME= 0.001320443125 ANG MOM Y = 0
TIME= 0.001320443125 ANG MOM Z = 0
TIME= 0.001320443125 RHO*e = 2.5
TIME= 0.001320443125 RHO*K = 1.5
TIME= 0.001320443125 RHO*E = 4
TIME= 0.001320443125 CENTER OF MASS X-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS X-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Y-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Y-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Z-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Z-VEL = 1
TIME= 0.001320443125 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.001320443125 MAXIMUM DENSITY = 1
[STEP 2] Coarse TimeStep time: 1.906495516
[STEP 2] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 2 TIME = 0.001320443125 DT = 0.0006763245274
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007101407537 = 1.05 * 0.0006763245274
[Level 0 step 3] ADVANCE at time 0.001320443125 with dt = 0.0007101407537
[1m[32m Beginning subcycle 1 starting at time 0.001320443125 with dt = 0.0007101407537[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.019397651 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.016706013 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1389458851
[Level 0 step 3] Advanced 262144 cells
TIME= 0.002030583879 MASS = 1
TIME= 0.002030583879 XMOM = 1
TIME= 0.002030583879 YMOM = 1
TIME= 0.002030583879 ZMOM = 1
TIME= 0.002030583879 ANG MOM X = 0
TIME= 0.002030583879 ANG MOM Y = 0
TIME= 0.002030583879 ANG MOM Z = 0
TIME= 0.002030583879 RHO*e = 2.5
TIME= 0.002030583879 RHO*K = 1.5
TIME= 0.002030583879 RHO*E = 4
TIME= 0.002030583879 CENTER OF MASS X-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS X-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Y-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Y-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Z-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Z-VEL = 1
TIME= 0.002030583879 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.002030583879 MAXIMUM DENSITY = 1
[STEP 3] Coarse TimeStep time: 1.899530599
[STEP 3] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 3 TIME = 0.002030583879 DT = 0.0007101407537
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007456477914 = 1.05 * 0.0007101407537
[Level 0 step 4] ADVANCE at time 0.002030583879 with dt = 0.0007456477914
[1m[32m Beginning subcycle 1 starting at time 0.002030583879 with dt = 0.0007456477914[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.019379455 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.017830113 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1386985571
[Level 0 step 4] Advanced 262144 cells
TIME= 0.00277623167 MASS = 1
TIME= 0.00277623167 XMOM = 1
TIME= 0.00277623167 YMOM = 1
TIME= 0.00277623167 ZMOM = 1
TIME= 0.00277623167 ANG MOM X = 0
TIME= 0.00277623167 ANG MOM Y = 0
TIME= 0.00277623167 ANG MOM Z = 0
TIME= 0.00277623167 RHO*e = 2.5
TIME= 0.00277623167 RHO*K = 1.5
TIME= 0.00277623167 RHO*E = 4
TIME= 0.00277623167 CENTER OF MASS X-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS X-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Y-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Y-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Z-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Z-VEL = 1
TIME= 0.00277623167 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.00277623167 MAXIMUM DENSITY = 1
[STEP 4] Coarse TimeStep time: 1.903136378
[STEP 4] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 4 TIME = 0.00277623167 DT = 0.0007456477914
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.000782930181 = 1.05 * 0.0007456477914
[Level 0 step 5] ADVANCE at time 0.00277623167 with dt = 0.000782930181
[1m[32m Beginning subcycle 1 starting at time 0.00277623167 with dt = 0.000782930181[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.020287028 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.015538636 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.139399212
[Level 0 step 5] Advanced 262144 cells
TIME= 0.003559161851 MASS = 1
TIME= 0.003559161851 XMOM = 1
TIME= 0.003559161851 YMOM = 1
TIME= 0.003559161851 ZMOM = 1
TIME= 0.003559161851 ANG MOM X = 0
TIME= 0.003559161851 ANG MOM Y = 0
TIME= 0.003559161851 ANG MOM Z = 0
TIME= 0.003559161851 RHO*e = 2.5
TIME= 0.003559161851 RHO*K = 1.5
TIME= 0.003559161851 RHO*E = 4
TIME= 0.003559161851 CENTER OF MASS X-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS X-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Y-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Y-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Z-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Z-VEL = 1
TIME= 0.003559161851 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.003559161851 MAXIMUM DENSITY = 1
[STEP 5] Coarse TimeStep time: 1.893471415
[STEP 5] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 5 TIME = 0.003559161851 DT = 0.000782930181
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.00082207669 = 1.05 * 0.000782930181
[Level 0 step 6] ADVANCE at time 0.003559161851 with dt = 0.00082207669
[1m[32m Beginning subcycle 1 starting at time 0.003559161851 with dt = 0.00082207669[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.019167189 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.01823255 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1394401598
[Level 0 step 6] Advanced 262144 cells
TIME= 0.004381238541 MASS = 1
TIME= 0.004381238541 XMOM = 1
TIME= 0.004381238541 YMOM = 1
TIME= 0.004381238541 ZMOM = 1
TIME= 0.004381238541 ANG MOM X = 0
TIME= 0.004381238541 ANG MOM Y = 0
TIME= 0.004381238541 ANG MOM Z = 0
TIME= 0.004381238541 RHO*e = 2.5
TIME= 0.004381238541 RHO*K = 1.5
TIME= 0.004381238541 RHO*E = 4
TIME= 0.004381238541 CENTER OF MASS X-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS X-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Y-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Y-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Z-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Z-VEL = 1
TIME= 0.004381238541 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.004381238541 MAXIMUM DENSITY = 1
[STEP 6] Coarse TimeStep time: 1.893227684
[STEP 6] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 6 TIME = 0.004381238541 DT = 0.00082207669
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0008631805245 = 1.05 * 0.00082207669
[Level 0 step 7] ADVANCE at time 0.004381238541 with dt = 0.0008631805245
[1m[32m Beginning subcycle 1 starting at time 0.004381238541 with dt = 0.0008631805245[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.020423407 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.01754064 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1392908273
[Level 0 step 7] Advanced 262144 cells
TIME= 0.005244419066 MASS = 1
TIME= 0.005244419066 XMOM = 1
TIME= 0.005244419066 YMOM = 1
TIME= 0.005244419066 ZMOM = 1
TIME= 0.005244419066 ANG MOM X = 0
TIME= 0.005244419066 ANG MOM Y = 0
TIME= 0.005244419066 ANG MOM Z = 0
TIME= 0.005244419066 RHO*e = 2.5
TIME= 0.005244419066 RHO*K = 1.5
TIME= 0.005244419066 RHO*E = 4
TIME= 0.005244419066 CENTER OF MASS X-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS X-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Y-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Y-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Z-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Z-VEL = 1
TIME= 0.005244419066 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.005244419066 MAXIMUM DENSITY = 1
[STEP 7] Coarse TimeStep time: 1.894919051
[STEP 7] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 7 TIME = 0.005244419066 DT = 0.0008631805245
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009063395508 = 1.05 * 0.0008631805245
[Level 0 step 8] ADVANCE at time 0.005244419066 with dt = 0.0009063395508
[1m[32m Beginning subcycle 1 starting at time 0.005244419066 with dt = 0.0009063395508[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.018752325 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.0154509 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1398997586
[Level 0 step 8] Advanced 262144 cells
TIME= 0.006150758616 MASS = 1
TIME= 0.006150758616 XMOM = 1
TIME= 0.006150758616 YMOM = 1
TIME= 0.006150758616 ZMOM = 1
TIME= 0.006150758616 ANG MOM X = 0
TIME= 0.006150758616 ANG MOM Y = 0
TIME= 0.006150758616 ANG MOM Z = 0
TIME= 0.006150758616 RHO*e = 2.5
TIME= 0.006150758616 RHO*K = 1.5
TIME= 0.006150758616 RHO*E = 4
TIME= 0.006150758616 CENTER OF MASS X-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS X-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Y-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Y-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Z-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Z-VEL = 1
TIME= 0.006150758616 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.006150758616 MAXIMUM DENSITY = 1
[STEP 8] Coarse TimeStep time: 1.886902397
[STEP 8] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 8 TIME = 0.006150758616 DT = 0.0009063395508
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009516565283 = 1.05 * 0.0009063395508
[Level 0 step 9] ADVANCE at time 0.006150758616 with dt = 0.0009516565283
[1m[32m Beginning subcycle 1 starting at time 0.006150758616 with dt = 0.0009516565283[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.020427198 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.015155189 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.140658461
[Level 0 step 9] Advanced 262144 cells
TIME= 0.007102415145 MASS = 1
TIME= 0.007102415145 XMOM = 1
TIME= 0.007102415145 YMOM = 1
TIME= 0.007102415145 ZMOM = 1
TIME= 0.007102415145 ANG MOM X = 0
TIME= 0.007102415145 ANG MOM Y = 0
TIME= 0.007102415145 ANG MOM Z = 0
TIME= 0.007102415145 RHO*e = 2.5
TIME= 0.007102415145 RHO*K = 1.5
TIME= 0.007102415145 RHO*E = 4
TIME= 0.007102415145 CENTER OF MASS X-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS X-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Y-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Y-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Z-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Z-VEL = 1
TIME= 0.007102415145 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.007102415145 MAXIMUM DENSITY = 1
[STEP 9] Coarse TimeStep time: 1.905976129
[STEP 9] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 9 TIME = 0.007102415145 DT = 0.0009516565283
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009992393547 = 1.05 * 0.0009516565283
[Level 0 step 10] ADVANCE at time 0.007102415145 with dt = 0.0009992393547
[1m[32m Beginning subcycle 1 starting at time 0.007102415145 with dt = 0.0009992393547[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.01966645 on level 0
... mhd ...!!!
Castro::do_new_sources() time = 0.015397826 on level 0
...estimated hydro-limited timestep at level 0: 0.006441185975
...hydro-limited CFL timestep constrained at (i,j,k) = (0,0,0)
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1408248631
[Level 0 step 10] Advanced 262144 cells
TIME= 0.008101654499 MASS = 1
TIME= 0.008101654499 XMOM = 1
TIME= 0.008101654499 YMOM = 1
TIME= 0.008101654499 ZMOM = 1
TIME= 0.008101654499 ANG MOM X = 0
TIME= 0.008101654499 ANG MOM Y = 0
TIME= 0.008101654499 ANG MOM Z = 0
TIME= 0.008101654499 RHO*e = 2.5
TIME= 0.008101654499 RHO*K = 1.5
TIME= 0.008101654499 RHO*E = 4
TIME= 0.008101654499 CENTER OF MASS X-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS X-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Y-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Y-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Z-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Z-VEL = 1
TIME= 0.008101654499 MAXIMUM TEMPERATURE = 1.202723724e-08
TIME= 0.008101654499 MAXIMUM DENSITY = 1
[STEP 10] Coarse TimeStep time: 1.874839211
[STEP 10] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 10 TIME = 0.008101654499 DT = 0.0009992393547
PLOTFILE: file = species-mhd_plt00010
Write plotfile time = 0.007617842 seconds
Ending run at 18:48:14 UTC on 2024-03-28.
Run time = 19.14073723
Run time without initialization = 19.05541525
Average number of zones advanced per microsecond: 0.138
Average number of zones advanced per microsecond per rank: 0.034
TinyProfiler total time across processes [min...avg...max]: 19.14 ... 19.14 ... 19.14
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
Castro::do_advance_ctu() 10 16.6028 17.4791 17.7915 92.95%
check_for_negative_density() 10 0.02766 0.342 1.22 6.37%
FabArray::ParallelCopy_finish() 148 0.1583 0.183 0.2335 1.22%
Castro::reset_internal_energy(Fab) 1008 0.1159 0.1246 0.1311 0.68%
FabArray::ParallelCopy_nowait() 148 0.09823 0.1207 0.1294 0.68%
FabArray::setVal() 137 0.1097 0.1108 0.1119 0.58%
FillPatchIterator::Initialize 148 0.09877 0.1043 0.1085 0.57%
amrex::Copy() 196 0.07155 0.08277 0.08706 0.45%
Castro::estTimeStep() 21 0.07639 0.07821 0.0831 0.43%
Castro::normalize_species() 62 0.05628 0.06661 0.07733 0.40%
Castro::initialize_do_advance() 10 0.07333 0.07433 0.07548 0.39%
Castro::sum_integrated_quantities() 11 0.03 0.04332 0.06137 0.32%
FabArray::Saxpy() 50 0.03172 0.04347 0.04814 0.25%
Castro::construct_new_source() 40 0.03192 0.03227 0.03243 0.17%
Amr::coarseTimeStep() 10 0.0006035 0.02283 0.03024 0.16%
Castro::computeTemp() 63 0.0279 0.02866 0.02903 0.15%
Castro::finalize_do_advance() 10 0.01923 0.02066 0.02135 0.11%
Castro::construct_old_source() 40 0.01787 0.01965 0.02039 0.11%
Castro::initialize_advance() 10 0.01378 0.01798 0.01954 0.10%
Castro::do_new_sources() 10 0.0003367 0.005875 0.01864 0.10%
MultiFab::contains_nan() 20 0.01458 0.01564 0.01669 0.09%
AmrLevel::derive() 44 0.0132 0.01505 0.01607 0.08%
Castro::volWgtSum() 132 0.01373 0.01453 0.01486 0.08%
Castro::initMFs() 1 0.01332 0.01337 0.01348 0.07%
Castro::do_old_sources() 10 0.0003422 0.00647 0.0134 0.07%
VisMF::Write(FabArray) 2 0.009813 0.01073 0.01321 0.07%
StateData::define() 5 0.01195 0.01199 0.01202 0.06%
Castro::swap_state_time_levels() 10 0.01018 0.01055 0.01155 0.06%
Amr::writePlotFile() 2 0.007486 0.01008 0.0113 0.06%
Castro::enforce_min_density() 62 0.0099 0.01055 0.01107 0.06%
Castro::buildMetrics() 1 0.003849 0.003926 0.004021 0.02%
main() 1 0.003546 0.003762 0.00387 0.02%
Castro::initData() 1 0.003559 0.003718 0.003869 0.02%
Castro::locWgtSum() 33 0.003307 0.00351 0.003612 0.02%
AmrLevel::FillPatch() 138 0.001107 0.001222 0.001305 0.01%
Castro::finalize_advance() 10 0.0007083 0.000822 0.0009012 0.00%
Castro::subcycle_advance_ctu() 10 5.876e-05 0.0002115 0.0006493 0.00%
Castro::enforce_consistent_e() 1 0.0004867 0.00051 0.0005351 0.00%
Amr::InitAmr() 1 0.0003611 0.0004059 0.0005346 0.00%
Castro::reset_internal_energy(MultiFab) 63 0.0004795 0.0004987 0.0005148 0.00%
Castro::computeNewDt() 9 1.357e-05 6.722e-05 0.0002176 0.00%
FillPatchIterator::FillFromLevel0() 148 0.000171 0.0001886 0.000203 0.00%
DistributionMapping::LeastUsedCPUs() 1 1.948e-05 0.0001466 0.0001941 0.00%
Castro::clean_state() 62 0.0001645 0.0001687 0.0001722 0.00%
FabArray::ParallelCopy() 148 0.0001632 0.0001667 0.0001683 0.00%
FabArrayBase::getCPC() 148 0.0001335 0.0001462 0.0001643 0.00%
FabArrayBase::CPC::define() 6 0.0001299 0.0001484 0.0001615 0.00%
StateDataPhysBCFunct::() 148 0.0001511 0.0001549 0.0001585 0.00%
FabArray::setDomainBndry() 148 0.0001127 0.0001281 0.0001423 0.00%
FillPatchSingleLevel 148 0.0001268 0.0001341 0.0001404 0.00%
Amr::timeStep() 10 7.266e-05 8.403e-05 0.0001049 0.00%
Amr::writeSmallPlotFile() 1 2.872e-05 4.314e-05 6.139e-05 0.00%
Castro::derive() 44 3.668e-05 5.036e-05 5.859e-05 0.00%
Castro::apply_source_to_state() 20 4.023e-05 4.832e-05 5.85e-05 0.00%
Amr::FinalizeInit() 1 6.026e-06 1.904e-05 5.45e-05 0.00%
Castro::advance() 10 3.775e-05 4.035e-05 4.231e-05 0.00%
Amr::defBaseLevel() 1 3.835e-05 3.953e-05 4.106e-05 0.00%
Castro::enforce_speed_limit() 62 3.155e-05 3.583e-05 4.078e-05 0.00%
Castro::check_for_nan() 20 2.373e-05 2.82e-05 3.287e-05 0.00%
Castro::expand_state() 10 2.716e-05 2.915e-05 3.186e-05 0.00%
Castro::Castro() 1 2.545e-05 2.753e-05 2.898e-05 0.00%
Castro::post_timestep() 10 1.813e-05 2.282e-05 2.45e-05 0.00%
AmrLevel::AmrLevel(dm) 1 1.804e-05 1.922e-05 2.113e-05 0.00%
Castro::create_source_corrector() 10 1.01e-05 1.252e-05 1.385e-05 0.00%
Castro::retry_advance_ctu() 10 6.733e-06 1.049e-05 1.262e-05 0.00%
Amr::initSubcycle() 1 1.109e-05 1.169e-05 1.246e-05 0.00%
Castro::post_init() 1 1.89e-06 4.469e-06 1.138e-05 0.00%
Castro::FluxRegCrseInit 10 9.201e-06 9.641e-06 1.028e-05 0.00%
Amr::InitializeInit() 1 2.845e-06 4.395e-06 6.767e-06 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 3.953e-06 5.507e-06 6.133e-06 0.00%
Castro::computeInitialDt() 2 4.095e-06 4.687e-06 5.488e-06 0.00%
Castro::post_regrid() 1 3.62e-06 3.849e-06 4.217e-06 0.00%
Castro::FluxRegFineAdd() 10 3.075e-06 3.443e-06 3.799e-06 0.00%
Amr::initialInit() 1 1.646e-06 2.185e-06 2.945e-06 0.00%
Amr::init() 1 2.064e-06 2.463e-06 2.784e-06 0.00%
DistributionMapping::Distribute() 1 9.5e-07 9.82e-07 1.014e-06 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 19.14 19.14 19.14 100.00%
Amr::coarseTimeStep() 10 19.05 19.05 19.05 99.53%
Amr::timeStep() 10 18.98 18.98 19.01 99.30%
Castro::advance() 10 18.86 18.86 18.86 98.53%
Castro::subcycle_advance_ctu() 10 18.74 18.74 18.75 97.96%
Castro::do_advance_ctu() 10 18.74 18.74 18.75 97.96%
check_for_negative_density() 10 0.02766 0.342 1.22 6.37%
Castro::initialize_do_advance() 10 0.4148 0.4253 0.4421 2.31%
AmrLevel::FillPatch() 138 0.4131 0.4235 0.4337 2.27%
FillPatchIterator::Initialize 148 0.3913 0.409 0.4315 2.25%
FillPatchIterator::FillFromLevel0() 148 0.2877 0.3046 0.3326 1.74%
FillPatchSingleLevel 148 0.2875 0.3044 0.3325 1.74%
FabArray::ParallelCopy() 148 0.2872 0.3042 0.3322 1.74%
Castro::expand_state() 10 0.2205 0.2367 0.2517 1.32%
Castro::clean_state() 62 0.2082 0.2285 0.2456 1.28%
FabArray::ParallelCopy_finish() 148 0.1583 0.183 0.2335 1.22%
Castro::do_old_sources() 10 0.1827 0.1983 0.2127 1.11%
Castro::do_new_sources() 10 0.1801 0.1819 0.1857 0.97%
Castro::computeTemp() 63 0.1443 0.1538 0.1602 0.84%
Castro::post_timestep() 10 0.1186 0.1264 0.148 0.77%
Castro::reset_internal_energy(MultiFab) 63 0.1164 0.1251 0.1315 0.69%
Castro::reset_internal_energy(Fab) 1008 0.1159 0.1246 0.1311 0.68%
FabArray::ParallelCopy_nowait() 148 0.09852 0.121 0.1297 0.68%
Castro::sum_integrated_quantities() 11 0.09543 0.1069 0.127 0.66%
Castro::initialize_advance() 10 0.0998 0.1109 0.1164 0.61%
FabArray::setVal() 137 0.1097 0.1108 0.1119 0.58%
Castro::construct_new_source() 40 0.09729 0.1057 0.1116 0.58%
amrex::Copy() 196 0.07155 0.08277 0.08706 0.45%
Amr::init() 1 0.08461 0.08474 0.08479 0.44%
Castro::estTimeStep() 21 0.07639 0.07821 0.0831 0.43%
Castro::normalize_species() 62 0.05628 0.06661 0.07733 0.40%
Amr::initialInit() 1 0.06923 0.06929 0.06932 0.36%
Castro::finalize_do_advance() 10 0.05484 0.05735 0.06119 0.32%
Castro::derive() 44 0.03934 0.04558 0.04863 0.25%
AmrLevel::derive() 44 0.0393 0.04553 0.04858 0.25%
Amr::InitializeInit() 1 0.04633 0.0478 0.04857 0.25%
Amr::defBaseLevel() 1 0.04633 0.0478 0.04856 0.25%
FabArray::Saxpy() 50 0.03172 0.04347 0.04814 0.25%
Castro::construct_old_source() 40 0.02824 0.03255 0.0343 0.18%
Castro::computeNewDt() 9 0.03192 0.032 0.03221 0.17%
Amr::writePlotFile() 2 0.02307 0.02314 0.02317 0.12%
Amr::FinalizeInit() 1 0.02075 0.02149 0.02298 0.12%
Castro::Castro() 1 0.02101 0.02123 0.0216 0.11%
Castro::apply_source_to_state() 20 0.01343 0.0175 0.01959 0.10%
Castro::check_for_nan() 20 0.01461 0.01567 0.01672 0.09%
MultiFab::contains_nan() 20 0.01458 0.01564 0.01669 0.09%
Castro::initData() 1 0.01283 0.01436 0.01498 0.08%
Castro::volWgtSum() 132 0.01373 0.01453 0.01486 0.08%
Castro::initMFs() 1 0.01332 0.01337 0.01348 0.07%
VisMF::Write(FabArray) 2 0.009813 0.01073 0.01321 0.07%
Castro::post_init() 1 0.01136 0.01189 0.01267 0.07%
AmrLevel::AmrLevel(dm) 1 0.01197 0.01201 0.01204 0.06%
StateData::define() 5 0.01195 0.01199 0.01202 0.06%
Castro::swap_state_time_levels() 10 0.01018 0.01055 0.01155 0.06%
Castro::computeInitialDt() 2 0.008869 0.009588 0.0111 0.06%
Castro::enforce_min_density() 62 0.0099 0.01055 0.01107 0.06%
Castro::finalize_advance() 10 0.006321 0.006654 0.006965 0.04%
Castro::post_regrid() 1 0.003629 0.004417 0.004932 0.03%
Castro::buildMetrics() 1 0.004221 0.004312 0.004424 0.02%
Castro::locWgtSum() 33 0.003307 0.00351 0.003612 0.02%
Amr::InitAmr() 1 0.0003728 0.0004176 0.0005461 0.00%
Castro::enforce_consistent_e() 1 0.0004867 0.00051 0.0005351 0.00%
FabArrayBase::getCPC() 148 0.0002656 0.0002947 0.0003134 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 2.439e-05 0.0001531 0.0002013 0.00%
DistributionMapping::LeastUsedCPUs() 1 1.948e-05 0.0001466 0.0001941 0.00%
FabArrayBase::CPC::define() 6 0.0001299 0.0001484 0.0001615 0.00%
StateDataPhysBCFunct::() 148 0.0001511 0.0001549 0.0001585 0.00%
FabArray::setDomainBndry() 148 0.0001127 0.0001281 0.0001423 0.00%
Amr::writeSmallPlotFile() 1 2.872e-05 4.314e-05 6.139e-05 0.00%
Castro::enforce_speed_limit() 62 3.155e-05 3.583e-05 4.078e-05 0.00%
Castro::create_source_corrector() 10 1.01e-05 1.252e-05 1.385e-05 0.00%
Castro::retry_advance_ctu() 10 6.733e-06 1.049e-05 1.262e-05 0.00%
Amr::initSubcycle() 1 1.109e-05 1.169e-05 1.246e-05 0.00%
Castro::FluxRegCrseInit 10 9.201e-06 9.641e-06 1.028e-05 0.00%
Castro::FluxRegFineAdd() 10 3.075e-06 3.443e-06 3.799e-06 0.00%
DistributionMapping::Distribute() 1 9.5e-07 9.82e-07 1.014e-06 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2]
Pinned Memory Usage:
---------------------------------------------------------------------------------------------------------------------
Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max
---------------------------------------------------------------------------------------------------------------------
The_Pinned_Arena::Initialize() 4 4 6 B 6 B 7 B 8192 KiB 8192 KiB 8192 KiB
---------------------------------------------------------------------------------------------------------------------
AMReX (v2024-42-g7437aa17d36f) finalized