Initializing AMReX (24.04-28-gddf15b965da6)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (24.04-28-gddf15b965da6) initialized Starting run at 05:28:08 UTC on 2024-04-30. Successfully read inputs file ... Castro git describe: 24.04-25-g45f956011 AMReX git describe: 24.04-28-gddf15b965 Microphysics git describe: 24.04-10-g8e7e3750 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014040219 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.34815116 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.33516614 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.344334982 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.360535864 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.338713516 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.308458601 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.309609016 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.309039443 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.308705409 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.305882835 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00756094 seconds Ending run at 05:28:11 UTC on 2024-04-30. Run time = 3.477950542 Run time without initialization = 3.280635165 Average number of zones advanced per microsecond: 0.799 Average number of zones advanced per microsecond per rank: 0.100 TinyProfiler total time across processes [min...avg...max]: 3.478 ... 3.478 ... 3.478 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2809 2.3318 2.3790 68.40% Gravity::make_radial_gravity() 21 0.2918 0.2999 0.3182 9.15% Castro::initData() 1 0.05712 0.09369 0.1324 3.81% check_for_negative_density() 10 0.01824 0.06966 0.1239 3.56% Castro::estTimeStep() 21 0.02467 0.07194 0.1094 3.14% amrex::Copy() 193 0.06436 0.07731 0.08328 2.39% FabArray::ParallelCopy_finish() 41 0.03923 0.05582 0.0788 2.27% FabArray::setVal() 143 0.06301 0.06956 0.07872 2.26% Castro::reset_internal_energy(Fab) 1008 0.04367 0.04658 0.05345 1.54% Castro::normalize_species() 62 0.04121 0.04298 0.04451 1.28% FabArray::ParallelCopy_nowait() 41 0.03335 0.03905 0.04118 1.18% FillPatchIterator::Initialize 41 0.02861 0.03297 0.03547 1.02% StateData::FillBoundary(geom) 41 0.02766 0.03049 0.03371 0.97% Gravity::interpolate_monopole_grav() 21 0.02734 0.02948 0.03129 0.90% Castro::construct_new_gravity_source() 10 0.02053 0.0248 0.02807 0.81% Castro::initialize_do_advance() 10 0.01368 0.0174 0.02048 0.59% Castro::computeTemp() 63 0.01772 0.01912 0.02037 0.59% FabArray::setDomainBndry() 41 0.008536 0.01208 0.01397 0.40% MultiFab::contains_nan() 20 0.009539 0.01069 0.01388 0.40% FabArray::Saxpy() 20 0.009396 0.01207 0.01321 0.38% Castro::initialize_advance() 10 0.00551 0.009658 0.0122 0.35% Amr::writePlotFile() 2 0.007782 0.01009 0.01172 0.34% VisMF::Write(FabArray) 2 0.008195 0.008976 0.01134 0.33% Castro::enforce_min_density() 62 0.007083 0.007825 0.01092 0.31% Castro::construct_old_gravity_source() 10 0.006249 0.008801 0.009552 0.27% Amr::coarseTimeStep() 10 0.002633 0.007064 0.008866 0.25% Castro::construct_new_source() 50 0.005047 0.005854 0.006235 0.18% Gravity::get_new_grav_vector() 11 0.002562 0.003434 0.00386 0.11% main() 1 0.003231 0.00348 0.003697 0.11% Gravity::get_old_grav_vector() 10 0.001497 0.002044 0.002422 0.07% Castro::finalize_do_advance() 10 0.0004222 0.0008882 0.0009934 0.03% AmrLevel::FillPatch() 41 0.000724 0.0008211 0.0009496 0.03% Amr::timeStep() 10 0.0001547 0.0002174 0.0004536 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000274 0.0002947 0.0003673 0.01% Castro::do_advance_ctu() 10 0.0001584 0.0001805 0.0002079 0.01% Castro::clean_state() 62 0.0001383 0.0001603 0.0001965 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001093 0.0001228 0.0001373 0.00% StateDataPhysBCFunct::() 41 9.797e-05 0.0001062 0.0001171 0.00% Castro::Castro() 1 7.802e-05 9.562e-05 0.0001065 0.00% Castro::do_old_sources() 10 7.247e-05 9.107e-05 0.0001029 0.00% Castro::construct_old_source() 50 5.322e-05 7.943e-05 0.0001023 0.00% FabArray::ParallelCopy() 41 7.738e-05 8.84e-05 9.497e-05 0.00% Amr::FinalizeInit() 1 3.583e-06 1.566e-05 9.408e-05 0.00% FillPatchSingleLevel 41 6.899e-05 7.615e-05 8.639e-05 0.00% Castro::do_new_sources() 10 4.948e-05 6.163e-05 7.739e-05 0.00% Amr::defBaseLevel() 1 4.491e-05 5.395e-05 6.446e-05 0.00% Castro::check_for_nan() 20 2.022e-05 2.861e-05 5.976e-05 0.00% Castro::subcycle_advance_ctu() 10 3.904e-05 5.042e-05 5.839e-05 0.00% Castro::advance() 10 4.012e-05 4.846e-05 5.665e-05 0.00% Castro::apply_source_to_state() 20 3.652e-05 4.198e-05 5.151e-05 0.00% Castro::construct_new_gravity() 10 2.797e-05 3.586e-05 5.072e-05 0.00% Castro::construct_old_gravity() 10 3.352e-05 3.673e-05 4.168e-05 0.00% Castro::post_timestep() 10 1.425e-05 1.987e-05 3.186e-05 0.00% Castro::expand_state() 10 2.207e-05 2.627e-05 3.136e-05 0.00% Castro::post_init() 1 8.879e-06 1.014e-05 1.198e-05 0.00% Castro::computeNewDt() 9 8.299e-06 9.493e-06 1.145e-05 0.00% Amr::InitializeInit() 1 2.88e-06 4.594e-06 9.668e-06 0.00% Amr::initialInit() 1 1.497e-06 3.622e-06 8.611e-06 0.00% Castro::computeInitialDt() 2 3.269e-06 3.848e-06 4.034e-06 0.00% Amr::init() 1 1.833e-06 2.299e-06 3.616e-06 0.00% Other 200 0.0168 0.01951 0.02096 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.478 3.478 3.478 100.00% Amr::coarseTimeStep() 10 3.269 3.269 3.269 94.00% Amr::timeStep() 10 3.25 3.252 3.256 93.63% Castro::advance() 10 3.234 3.235 3.236 93.04% Castro::subcycle_advance_ctu() 10 3.154 3.162 3.167 91.06% Castro::do_advance_ctu() 10 3.154 3.162 3.167 91.05% Castro::construct_ctu_hydro_source() 10 2.418 2.423 2.431 69.89% Gravity::make_radial_gravity() 21 0.3084 0.316 0.3318 9.54% Gravity::get_new_grav_vector() 11 0.2106 0.2187 0.2217 6.37% AmrLevel::FillPatch() 41 0.1903 0.2021 0.2113 6.07% Castro::construct_old_gravity() 10 0.1784 0.1851 0.1969 5.66% Amr::init() 1 0.1966 0.1967 0.1968 5.66% Castro::construct_new_gravity() 10 0.1869 0.194 0.1963 5.64% Gravity::get_old_grav_vector() 10 0.1773 0.1843 0.1959 5.63% Amr::initialInit() 1 0.1823 0.1826 0.1829 5.26% FillPatchIterator::Initialize 41 0.1577 0.1709 0.1788 5.14% Castro::initialize_do_advance() 10 0.1555 0.1656 0.1739 5.00% Amr::InitializeInit() 1 0.07957 0.1149 0.1541 4.43% Amr::defBaseLevel() 1 0.07956 0.1149 0.1541 4.43% FillPatchIterator::FillFromLevel0() 41 0.1086 0.1258 0.1413 4.06% FillPatchSingleLevel 41 0.1085 0.1257 0.1412 4.06% Castro::initData() 1 0.06148 0.09762 0.1362 3.91% Castro::clean_state() 62 0.1099 0.1161 0.1241 3.57% check_for_negative_density() 10 0.01824 0.06966 0.1239 3.56% Castro::expand_state() 10 0.1017 0.1125 0.1211 3.48% FabArray::ParallelCopy() 41 0.07836 0.09505 0.1123 3.23% Castro::estTimeStep() 21 0.02467 0.07194 0.1094 3.14% Amr::FinalizeInit() 1 0.02865 0.06777 0.1031 2.96% Castro::do_old_sources() 10 0.08924 0.09146 0.09311 2.68% amrex::Copy() 193 0.06436 0.07731 0.08328 2.39% FabArray::ParallelCopy_finish() 41 0.03923 0.05582 0.0788 2.27% FabArray::setVal() 143 0.06301 0.06956 0.07872 2.26% Castro::initialize_advance() 10 0.06439 0.07008 0.07751 2.23% Castro::computeInitialDt() 2 0.002322 0.04154 0.07686 2.21% Castro::computeTemp() 63 0.06193 0.066 0.07418 2.13% Castro::do_new_sources() 10 0.05301 0.06497 0.07413 2.13% Castro::reset_internal_energy(MultiFab) 63 0.04395 0.04688 0.05381 1.55% Castro::reset_internal_energy(Fab) 1008 0.04367 0.04658 0.05345 1.54% Castro::normalize_species() 62 0.04121 0.04298 0.04451 1.28% FabArray::ParallelCopy_nowait() 41 0.03346 0.03914 0.04126 1.19% Castro::construct_new_source() 50 0.02558 0.03066 0.03392 0.98% StateDataPhysBCFunct::() 41 0.02777 0.03059 0.03382 0.97% StateData::FillBoundary(geom) 41 0.02766 0.03049 0.03371 0.97% Castro::finalize_do_advance() 10 0.01234 0.02208 0.03361 0.97% Gravity::interpolate_monopole_grav() 21 0.02734 0.02948 0.03129 0.90% Castro::construct_new_gravity_source() 10 0.02053 0.0248 0.02807 0.81% Castro::post_init() 1 0.02524 0.02571 0.02603 0.75% Castro::post_timestep() 10 0.01499 0.0165 0.02201 0.63% Amr::writePlotFile() 2 0.0216 0.02175 0.02201 0.63% FabArray::setDomainBndry() 41 0.008536 0.01208 0.01397 0.40% Castro::check_for_nan() 20 0.009565 0.01071 0.01393 0.40% MultiFab::contains_nan() 20 0.009539 0.01069 0.01388 0.40% Castro::apply_source_to_state() 20 0.009433 0.01211 0.01325 0.38% FabArray::Saxpy() 20 0.009396 0.01207 0.01321 0.38% Castro::Castro() 1 0.009504 0.01114 0.01175 0.34% VisMF::Write(FabArray) 2 0.008195 0.008976 0.01134 0.33% Castro::enforce_min_density() 62 0.007083 0.007825 0.01092 0.31% Castro::construct_old_source() 50 0.006302 0.00888 0.009629 0.28% Castro::construct_old_gravity_source() 10 0.006249 0.008801 0.009552 0.27% Castro::computeNewDt() 9 0.009195 0.009213 0.009226 0.27% Other 200 0.02659 0.03074 0.0335 0.96% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 38 B 40 B 50 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (24.04-28-gddf15b965da6) finalized