Initializing AMReX (24.07-3-g7dc2081a91e1)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (24.07-3-g7dc2081a91e1) initialized Starting run at 05:38:04 UTC on 2024-07-03. Successfully read inputs file ... Castro git describe: 24.06-34-g1e83137cd AMReX git describe: 24.07-3-g7dc2081a9 Microphysics git describe: 24.07-1-g0a96241b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014743314 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.353780898 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.357917086 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.332653392 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.333401239 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.3758256 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.31752508 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.314208063 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.314699235 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.331350632 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.337727081 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00756593 seconds Ending run at 05:38:08 UTC on 2024-07-03. Run time = 3.585022031 Run time without initialization = 3.382202986 Average number of zones advanced per microsecond: 0.775 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.584 ... 3.585 ... 3.585 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2991 2.3896 2.4394 68.04% Gravity::make_radial_gravity() 21 0.2944 0.3071 0.3209 8.95% check_for_negative_density() 10 0.04938 0.09727 0.1902 5.31% Castro::initData() 1 0.04917 0.08887 0.1362 3.80% Castro::estTimeStep() 21 0.0296 0.07983 0.12 3.35% FabArray::ParallelCopy_finish() 41 0.04803 0.06222 0.09661 2.69% amrex::Copy() 193 0.06562 0.08057 0.09306 2.60% FabArray::setVal() 143 0.0602 0.06932 0.08596 2.40% FabArray::ParallelCopy_nowait() 41 0.03691 0.04302 0.05198 1.45% Castro::reset_internal_energy(Fab) 1008 0.04581 0.04655 0.04749 1.32% Castro::normalize_species() 62 0.04138 0.04225 0.04313 1.20% FillPatchIterator::Initialize 41 0.02828 0.03389 0.04058 1.13% StateData::FillBoundary(geom) 41 0.02947 0.03355 0.0353 0.98% Gravity::interpolate_monopole_grav() 21 0.02797 0.02933 0.03069 0.86% Castro::construct_new_gravity_source() 10 0.02186 0.02359 0.02662 0.74% Castro::initialize_do_advance() 10 0.01219 0.01736 0.02376 0.66% Castro::computeTemp() 63 0.01873 0.0194 0.02025 0.56% Castro::initialize_advance() 10 0.005315 0.01057 0.01343 0.37% FabArray::Saxpy() 20 0.009935 0.01198 0.01272 0.35% MultiFab::contains_nan() 20 0.009431 0.01056 0.01265 0.35% VisMF::Write(FabArray) 2 0.009164 0.009798 0.01216 0.34% FabArray::setDomainBndry() 41 0.007947 0.009834 0.01144 0.32% Amr::writePlotFile() 2 0.007633 0.01022 0.01087 0.30% Castro::construct_old_gravity_source() 10 0.006515 0.008829 0.009454 0.26% Castro::initMFs() 1 0.006498 0.007057 0.008287 0.23% Castro::construct_new_source() 50 0.005898 0.006285 0.006499 0.18% main() 1 0.003726 0.004183 0.00468 0.13% Gravity::get_new_grav_vector() 11 0.002908 0.003549 0.004046 0.11% Amr::coarseTimeStep() 10 0.001501 0.002545 0.002973 0.08% Gravity::get_old_grav_vector() 10 0.001634 0.002008 0.00241 0.07% Castro::finalize_do_advance() 10 0.0004317 0.0009651 0.001064 0.03% AmrLevel::FillPatch() 41 0.0007509 0.0008865 0.001058 0.03% Amr::timeStep() 10 0.0001724 0.0002255 0.0004358 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002814 0.0002931 0.0003083 0.01% StateDataPhysBCFunct::() 41 9.998e-05 0.0001258 0.0001876 0.01% Castro::clean_state() 62 0.0001501 0.0001584 0.0001695 0.00% Castro::do_advance_ctu() 10 0.0001314 0.0001477 0.0001598 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001059 0.0001205 0.0001371 0.00% Castro::Castro() 1 7.116e-05 9.063e-05 0.0001127 0.00% FabArray::ParallelCopy() 41 7.858e-05 9.227e-05 0.0001106 0.00% Castro::do_old_sources() 10 7.822e-05 9.111e-05 0.0001027 0.00% Amr::FinalizeInit() 1 3.293e-06 1.483e-05 8.847e-05 0.00% FillPatchSingleLevel 41 7.481e-05 7.886e-05 8.547e-05 0.00% Castro::construct_old_source() 50 5.024e-05 6.832e-05 8.38e-05 0.00% Castro::subcycle_advance_ctu() 10 3.935e-05 4.898e-05 6.803e-05 0.00% Castro::do_new_sources() 10 5.61e-05 6.085e-05 6.765e-05 0.00% Castro::advance() 10 4.402e-05 4.974e-05 5.685e-05 0.00% Castro::apply_source_to_state() 20 4.245e-05 4.74e-05 5.24e-05 0.00% Amr::defBaseLevel() 1 2.979e-05 3.825e-05 4.821e-05 0.00% Castro::construct_old_gravity() 10 3.275e-05 3.794e-05 4.282e-05 0.00% Castro::expand_state() 10 2.012e-05 2.674e-05 4.043e-05 0.00% Castro::construct_new_gravity() 10 2.928e-05 3.427e-05 3.947e-05 0.00% Castro::check_for_nan() 20 2.095e-05 2.479e-05 3.481e-05 0.00% Castro::post_timestep() 10 1.336e-05 1.81e-05 2.41e-05 0.00% Castro::post_init() 1 8.951e-06 1.292e-05 1.775e-05 0.00% Amr::initialInit() 1 1.373e-06 2.985e-06 1.287e-05 0.00% Castro::computeNewDt() 9 7.819e-06 8.752e-06 1.215e-05 0.00% Amr::InitializeInit() 1 2.786e-06 3.715e-06 5.42e-06 0.00% Castro::computeInitialDt() 2 2.951e-06 3.637e-06 4.417e-06 0.00% Amr::init() 1 1.809e-06 2.133e-06 2.54e-06 0.00% Other 261 0.01761 0.01967 0.02124 0.59% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.584 3.585 3.585 100.00% Amr::coarseTimeStep() 10 3.37 3.37 3.37 94.00% Amr::timeStep() 10 3.356 3.357 3.358 93.65% Castro::advance() 10 3.34 3.34 3.341 93.18% Castro::subcycle_advance_ctu() 10 3.252 3.267 3.279 91.46% Castro::do_advance_ctu() 10 3.252 3.267 3.279 91.46% Castro::construct_ctu_hydro_source() 10 2.505 2.507 2.51 70.01% Gravity::make_radial_gravity() 21 0.3108 0.3232 0.334 9.32% AmrLevel::FillPatch() 41 0.1854 0.2168 0.2275 6.34% Gravity::get_new_grav_vector() 11 0.2124 0.2132 0.2139 5.97% Castro::construct_old_gravity() 10 0.1837 0.1955 0.2044 5.70% Gravity::get_old_grav_vector() 10 0.1827 0.1945 0.2033 5.67% FillPatchIterator::Initialize 41 0.1574 0.183 0.2024 5.65% Amr::init() 1 0.2021 0.2023 0.2023 5.64% Castro::initialize_do_advance() 10 0.159 0.1832 0.1932 5.39% check_for_negative_density() 10 0.04938 0.09727 0.1902 5.31% Castro::construct_new_gravity() 10 0.187 0.1877 0.1887 5.26% Amr::initialInit() 1 0.187 0.1872 0.1875 5.23% FillPatchIterator::FillFromLevel0() 41 0.1195 0.1393 0.1659 4.63% FillPatchSingleLevel 41 0.1193 0.1392 0.1658 4.62% Amr::InitializeInit() 1 0.0703 0.1097 0.158 4.41% Amr::defBaseLevel() 1 0.0703 0.1097 0.158 4.41% Castro::initData() 1 0.05356 0.09268 0.1395 3.89% Castro::expand_state() 10 0.1042 0.1294 0.1387 3.87% FabArray::ParallelCopy() 41 0.08968 0.1054 0.1337 3.73% Castro::estTimeStep() 21 0.0296 0.07983 0.12 3.35% Amr::FinalizeInit() 1 0.02898 0.07746 0.1168 3.26% Castro::clean_state() 62 0.1132 0.1151 0.1166 3.25% Castro::do_old_sources() 10 0.09133 0.09466 0.09771 2.73% FabArray::ParallelCopy_finish() 41 0.04803 0.06222 0.09661 2.69% amrex::Copy() 193 0.06562 0.08057 0.09306 2.60% Castro::computeInitialDt() 2 0.002442 0.05072 0.09018 2.52% FabArray::setVal() 143 0.0602 0.06932 0.08596 2.40% Castro::initialize_advance() 10 0.05743 0.07033 0.0854 2.38% Castro::do_new_sources() 10 0.05692 0.06247 0.06851 1.91% Castro::computeTemp() 63 0.06513 0.06623 0.06751 1.88% FabArray::ParallelCopy_nowait() 41 0.03701 0.04311 0.05205 1.45% Castro::reset_internal_energy(MultiFab) 63 0.04609 0.04684 0.04779 1.33% Castro::reset_internal_energy(Fab) 1008 0.04581 0.04655 0.04749 1.32% Castro::normalize_species() 62 0.04138 0.04225 0.04313 1.20% StateDataPhysBCFunct::() 41 0.02957 0.03368 0.03544 0.99% StateData::FillBoundary(geom) 41 0.02947 0.03355 0.0353 0.98% Castro::construct_new_source() 50 0.02776 0.02987 0.03311 0.92% Gravity::interpolate_monopole_grav() 21 0.02797 0.02933 0.03069 0.86% Castro::post_init() 1 0.02622 0.02643 0.02674 0.75% Castro::construct_new_gravity_source() 10 0.02186 0.02359 0.02662 0.74% Castro::finalize_do_advance() 10 0.01366 0.02043 0.02536 0.71% Amr::writePlotFile() 2 0.02245 0.02275 0.023 0.64% Castro::post_timestep() 10 0.01571 0.01606 0.01671 0.47% Castro::apply_source_to_state() 20 0.009977 0.01202 0.01277 0.36% FabArray::Saxpy() 20 0.009935 0.01198 0.01272 0.35% Castro::check_for_nan() 20 0.009455 0.01059 0.01268 0.35% MultiFab::contains_nan() 20 0.009431 0.01056 0.01265 0.35% VisMF::Write(FabArray) 2 0.009164 0.009798 0.01216 0.34% Castro::Castro() 1 0.009835 0.01102 0.01188 0.33% FabArray::setDomainBndry() 41 0.007947 0.009834 0.01144 0.32% Castro::computeNewDt() 9 0.009648 0.009655 0.009664 0.27% Castro::construct_old_source() 50 0.006566 0.008897 0.009523 0.27% Castro::construct_old_gravity_source() 10 0.006515 0.008829 0.009454 0.26% Castro::initMFs() 1 0.006498 0.007057 0.008287 0.23% Other 261 0.02772 0.03056 0.03309 0.92% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 34 B 37 B 43 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- AMReX (24.07-3-g7dc2081a91e1) finalized