Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:24:30 UTC on 2025-08-11. Successfully read inputs file ... Castro git describe: 25.08-11-g2dd6a13c0 AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.08-3-gd0f79a2d reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015071822 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.337048082 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.342857207 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.314939958 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.314709457 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.362425362 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.308689131 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298225135 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.297919586 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.298124595 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.298175676 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007688538 seconds Ending run at 05:24:33 UTC on 2025-08-11. Run time = 3.362388895 Run time without initialization = 3.186061633 Average number of zones advanced per microsecond: 0.823 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3611 ... 3.3616 ... 3.3624 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1974 2.2432 2.3079 68.64% Gravity::make_radial_gravity() 21 0.2901 0.2958 0.3111 9.25% check_for_negative_density() 10 0.01947 0.08626 0.1348 4.01% Castro::initData() 1 0.03733 0.07286 0.1122 3.34% Castro::estTimeStep() 21 0.0221 0.06815 0.1094 3.25% FabArray::ParallelCopy_finish() 41 0.03994 0.0487 0.08609 2.56% amrex::Copy() 193 0.06304 0.07755 0.08515 2.53% FabArray::setVal() 143 0.05383 0.06558 0.07049 2.10% Castro::reset_internal_energy(Fab) 1008 0.04062 0.04537 0.04858 1.44% Castro::normalize_species() 62 0.04476 0.04553 0.04669 1.39% FabArray::ParallelCopy_nowait() 41 0.03584 0.04084 0.04253 1.26% FillPatchIterator::Initialize 41 0.02798 0.03204 0.0341 1.01% StateData::FillBoundary(geom) 41 0.02827 0.0311 0.03263 0.97% Gravity::interpolate_monopole_grav() 21 0.02669 0.02704 0.02748 0.82% Castro::construct_new_gravity_source() 10 0.02313 0.02479 0.02679 0.80% Castro::computeTemp() 63 0.01673 0.01813 0.01919 0.57% Castro::initialize_do_advance() 10 0.01172 0.01616 0.01783 0.53% Castro::initialize_advance() 10 0.005514 0.01087 0.01414 0.42% FabArray::Saxpy() 20 0.01086 0.01265 0.01369 0.41% MultiFab::contains_nan() 20 0.01071 0.01166 0.01345 0.40% VisMF::Write(FabArray) 2 0.008961 0.009725 0.01292 0.38% FabArray::setDomainBndry() 41 0.006976 0.01023 0.01269 0.38% Amr::writePlotFile() 2 0.008066 0.01001 0.01105 0.33% Castro::construct_old_gravity_source() 10 0.007004 0.009714 0.01035 0.31% Castro::initMFs() 1 0.006499 0.007056 0.008133 0.24% Castro::enforce_min_density() 62 0.005892 0.006145 0.006532 0.19% Castro::construct_new_source() 50 0.005659 0.006014 0.006357 0.19% main() 1 0.003798 0.004075 0.004681 0.14% Gravity::get_new_grav_vector() 11 0.002816 0.003283 0.003621 0.11% Amr::coarseTimeStep() 10 0.0009229 0.00213 0.003295 0.10% Gravity::get_old_grav_vector() 10 0.001587 0.002049 0.002503 0.07% Castro::finalize_do_advance() 10 0.000597 0.00108 0.001427 0.04% AmrLevel::FillPatch() 41 0.0008266 0.001009 0.001158 0.03% Amr::timeStep() 10 0.0001403 0.0001806 0.0003702 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002768 0.0002975 0.0003453 0.01% Castro::do_advance_ctu() 10 0.0001378 0.0001653 0.0001917 0.01% Castro::clean_state() 62 0.0001409 0.0001574 0.0001824 0.01% StateDataPhysBCFunct::() 41 9.307e-05 0.0001196 0.000149 0.00% FillPatchIterator::FillFromLevel0() 41 9.312e-05 0.0001057 0.0001164 0.00% Castro::do_old_sources() 10 6.851e-05 8.989e-05 0.0001037 0.00% FabArray::ParallelCopy() 41 7.838e-05 9.266e-05 0.0001019 0.00% Castro::Castro() 1 5.071e-05 6.593e-05 8.069e-05 0.00% Castro::construct_old_source() 50 4.65e-05 6.641e-05 7.803e-05 0.00% Castro::apply_source_to_state() 20 4.032e-05 5.761e-05 7.436e-05 0.00% FillPatchSingleLevel 41 6.131e-05 6.761e-05 7.306e-05 0.00% Castro::do_new_sources() 10 5.286e-05 6.122e-05 7.021e-05 0.00% Castro::subcycle_advance_ctu() 10 4.462e-05 5.061e-05 6.472e-05 0.00% Amr::FinalizeInit() 1 3.017e-06 1.13e-05 6.362e-05 0.00% Castro::advance() 10 3.435e-05 4.892e-05 6.321e-05 0.00% Amr::defBaseLevel() 1 4.636e-05 5.423e-05 5.892e-05 0.00% Castro::construct_old_gravity() 10 3.542e-05 4.077e-05 5.051e-05 0.00% Castro::construct_new_gravity() 10 3.136e-05 3.564e-05 4.323e-05 0.00% Castro::check_for_nan() 20 2.378e-05 2.585e-05 2.809e-05 0.00% Castro::expand_state() 10 2.123e-05 2.422e-05 2.594e-05 0.00% Castro::post_init() 1 1.459e-05 1.719e-05 2.424e-05 0.00% Castro::post_timestep() 10 1.433e-05 1.629e-05 1.911e-05 0.00% Castro::computeNewDt() 9 8.529e-06 9.694e-06 1.044e-05 0.00% Amr::InitializeInit() 1 2.724e-06 3.77e-06 6.416e-06 0.00% Amr::init() 1 2.065e-06 2.699e-06 5.377e-06 0.00% Castro::computeInitialDt() 2 2.842e-06 3.385e-06 4.004e-06 0.00% Amr::initialInit() 1 1.709e-06 2.129e-06 2.62e-06 0.00% Other 199 0.009305 0.01288 0.0151 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.361 3.362 3.362 100.00% Amr::coarseTimeStep() 10 3.174 3.174 3.174 94.39% Amr::timeStep() 10 3.161 3.162 3.163 94.07% Castro::advance() 10 3.146 3.146 3.147 93.58% Castro::subcycle_advance_ctu() 10 3.07 3.075 3.09 91.89% Castro::do_advance_ctu() 10 3.069 3.075 3.09 91.89% Castro::construct_ctu_hydro_source() 10 2.344 2.351 2.355 70.03% Gravity::make_radial_gravity() 21 0.306 0.3115 0.3237 9.63% Gravity::get_new_grav_vector() 11 0.2069 0.2092 0.2107 6.27% AmrLevel::FillPatch() 41 0.1787 0.1953 0.2102 6.25% Castro::construct_old_gravity() 10 0.1787 0.183 0.1936 5.76% Gravity::get_old_grav_vector() 10 0.178 0.1824 0.193 5.74% Castro::construct_new_gravity() 10 0.1851 0.1866 0.1876 5.58% FillPatchIterator::Initialize 41 0.1478 0.1634 0.1856 5.52% Amr::init() 1 0.1751 0.1757 0.1763 5.24% Castro::initialize_do_advance() 10 0.1566 0.1625 0.1671 4.97% Amr::initialInit() 1 0.1599 0.1611 0.1621 4.82% FillPatchIterator::FillFromLevel0() 41 0.1104 0.1211 0.1507 4.48% FillPatchSingleLevel 41 0.1103 0.121 0.1506 4.48% check_for_negative_density() 10 0.01947 0.08626 0.1348 4.01% Amr::InitializeInit() 1 0.05807 0.09417 0.1342 3.99% Amr::defBaseLevel() 1 0.05807 0.09416 0.1342 3.99% FabArray::ParallelCopy() 41 0.08126 0.08973 0.1221 3.63% Castro::clean_state() 62 0.1083 0.1148 0.1205 3.58% Castro::expand_state() 10 0.1017 0.1095 0.1189 3.54% Castro::initData() 1 0.04107 0.07671 0.1158 3.44% Castro::estTimeStep() 21 0.0221 0.06815 0.1094 3.25% Amr::FinalizeInit() 1 0.02639 0.06696 0.1038 3.09% Castro::do_old_sources() 10 0.0894 0.09372 0.1015 3.02% FabArray::ParallelCopy_finish() 41 0.03994 0.0487 0.08609 2.56% amrex::Copy() 193 0.06304 0.07755 0.08515 2.53% Castro::computeInitialDt() 2 0.002141 0.04246 0.07915 2.35% Castro::initialize_advance() 10 0.05259 0.06828 0.07366 2.19% FabArray::setVal() 143 0.05383 0.06558 0.07049 2.10% Castro::do_new_sources() 10 0.0599 0.06413 0.06998 2.08% Castro::computeTemp() 63 0.05764 0.0638 0.06795 2.02% Castro::reset_internal_energy(MultiFab) 63 0.04091 0.04567 0.04888 1.45% Castro::reset_internal_energy(Fab) 1008 0.04062 0.04537 0.04858 1.44% Castro::normalize_species() 62 0.04476 0.04553 0.04669 1.39% FabArray::ParallelCopy_nowait() 41 0.03596 0.04094 0.04262 1.27% Castro::construct_new_source() 50 0.02901 0.0308 0.03315 0.99% StateDataPhysBCFunct::() 41 0.02838 0.03122 0.03272 0.97% StateData::FillBoundary(geom) 41 0.02827 0.0311 0.03263 0.97% Gravity::interpolate_monopole_grav() 21 0.02669 0.02704 0.02748 0.82% Castro::construct_new_gravity_source() 10 0.02313 0.02479 0.02679 0.80% Castro::post_init() 1 0.0232 0.02392 0.02427 0.72% Amr::writePlotFile() 2 0.022 0.0224 0.02299 0.68% Castro::finalize_do_advance() 10 0.01229 0.01805 0.02249 0.67% Castro::post_timestep() 10 0.01458 0.0155 0.01638 0.49% Castro::apply_source_to_state() 20 0.0109 0.01271 0.01375 0.41% FabArray::Saxpy() 20 0.01086 0.01265 0.01369 0.41% Castro::check_for_nan() 20 0.01073 0.01168 0.01347 0.40% MultiFab::contains_nan() 20 0.01071 0.01166 0.01345 0.40% VisMF::Write(FabArray) 2 0.008961 0.009725 0.01292 0.38% FabArray::setDomainBndry() 41 0.006976 0.01023 0.01269 0.38% Castro::Castro() 1 0.0101 0.01084 0.01177 0.35% Castro::construct_old_source() 50 0.007051 0.009781 0.01042 0.31% Castro::construct_old_gravity_source() 10 0.007004 0.009714 0.01035 0.31% Castro::computeNewDt() 9 0.008707 0.008725 0.008758 0.26% Castro::initMFs() 1 0.006499 0.007056 0.008133 0.24% Castro::enforce_min_density() 62 0.005892 0.006145 0.006532 0.19% Other 199 0.01935 0.02428 0.02792 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 34 B 39 B 57 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8657 KiB 8668 KiB 8671 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6759 KiB 6761 KiB 6763 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7139 KiB 7141 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4561 KiB 4568 KiB 4587 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 201 KiB 219 KiB 237 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2803 KiB 2806 KiB 2807 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 231 KiB 236 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 37 KiB 40 KiB 57 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2029 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 79 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 68 KiB 69 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized