Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:17:45 UTC on 2025-08-15. Successfully read inputs file ... Castro git describe: 25.08-12-gf8a308cc1 AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.08-3-gd0f79a2d reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014633926 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.359595639 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.3183372 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.333207476 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.316504398 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.376986721 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.303313831 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299291892 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.297179583 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.299493144 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.298317655 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007457659 seconds Ending run at 05:17:48 UTC on 2025-08-15. Run time = 3.40703138 Run time without initialization = 3.214484966 Average number of zones advanced per microsecond: 0.816 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.4018 ... 3.4055 ... 3.4071 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1837 2.2161 2.2705 66.64% Gravity::make_radial_gravity() 21 0.2966 0.3024 0.3125 9.17% check_for_negative_density() 10 0.06169 0.1235 0.1558 4.57% Castro::initData() 1 0.03697 0.07648 0.1216 3.57% Castro::estTimeStep() 21 0.02041 0.07211 0.1153 3.38% FabArray::ParallelCopy_finish() 41 0.05014 0.06152 0.09641 2.83% amrex::Copy() 193 0.06355 0.07874 0.08862 2.60% FabArray::setVal() 143 0.05546 0.06578 0.07233 2.12% Castro::normalize_species() 62 0.04481 0.04705 0.05229 1.53% Castro::reset_internal_energy(Fab) 1008 0.04176 0.04702 0.05179 1.52% FabArray::ParallelCopy_nowait() 41 0.03411 0.03951 0.04179 1.23% StateData::FillBoundary(geom) 41 0.02859 0.03204 0.03917 1.15% FillPatchIterator::Initialize 41 0.02732 0.03168 0.0349 1.02% Gravity::interpolate_monopole_grav() 21 0.02636 0.02668 0.02704 0.79% Castro::construct_new_gravity_source() 10 0.02269 0.02378 0.0265 0.78% MultiFab::contains_nan() 20 0.01046 0.01306 0.01938 0.57% Castro::computeTemp() 63 0.01727 0.01829 0.01936 0.57% Castro::initialize_do_advance() 10 0.0114 0.0158 0.01752 0.51% FabArray::setDomainBndry() 41 0.007803 0.01057 0.01697 0.50% Castro::initialize_advance() 10 0.005236 0.01063 0.0138 0.41% FabArray::Saxpy() 20 0.01013 0.01207 0.01329 0.39% Amr::writePlotFile() 2 0.007603 0.01017 0.01264 0.37% VisMF::Write(FabArray) 2 0.008362 0.009602 0.01204 0.35% Castro::initMFs() 1 0.006524 0.007891 0.01083 0.32% Castro::construct_old_gravity_source() 10 0.006491 0.008847 0.009792 0.29% StateData::define() 4 0.005521 0.006422 0.008283 0.24% Castro::construct_new_source() 50 0.005896 0.006034 0.006271 0.18% main() 1 0.003844 0.004182 0.004308 0.13% Gravity::get_old_grav_vector() 10 0.001807 0.002368 0.003932 0.12% Gravity::get_new_grav_vector() 11 0.002864 0.003508 0.003925 0.12% Amr::coarseTimeStep() 10 0.00086 0.001586 0.001956 0.06% Castro::finalize_do_advance() 10 0.0004743 0.001122 0.001277 0.04% AmrLevel::FillPatch() 41 0.000783 0.001105 0.001259 0.04% Amr::timeStep() 10 0.0001389 0.0001945 0.000471 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002702 0.0002925 0.0003193 0.01% Castro::do_advance_ctu() 10 0.0001402 0.0001864 0.0002245 0.01% Castro::clean_state() 62 0.0001432 0.0001618 0.0001717 0.01% StateDataPhysBCFunct::() 41 9.966e-05 0.0001115 0.0001273 0.00% FillPatchIterator::FillFromLevel0() 41 9.704e-05 0.0001052 0.0001241 0.00% Castro::do_old_sources() 10 6.552e-05 9.067e-05 0.0001212 0.00% FabArray::ParallelCopy() 41 7.904e-05 9.253e-05 0.0001006 0.00% Amr::FinalizeInit() 1 3.404e-06 1.513e-05 8.784e-05 0.00% Castro::construct_old_gravity() 10 3.814e-05 4.819e-05 8.178e-05 0.00% Castro::Castro() 1 4.728e-05 5.817e-05 7.66e-05 0.00% Castro::do_new_sources() 10 5.391e-05 6.539e-05 7.654e-05 0.00% Castro::check_for_nan() 20 2.299e-05 3.092e-05 7.326e-05 0.00% FillPatchSingleLevel 41 6.205e-05 6.79e-05 7.267e-05 0.00% Castro::construct_old_source() 50 4.316e-05 6.113e-05 6.98e-05 0.00% Castro::subcycle_advance_ctu() 10 3.833e-05 4.776e-05 6.097e-05 0.00% Castro::apply_source_to_state() 20 4.058e-05 5.198e-05 5.848e-05 0.00% Castro::advance() 10 4.149e-05 4.623e-05 5.789e-05 0.00% Amr::defBaseLevel() 1 3.876e-05 4.895e-05 5.664e-05 0.00% Castro::construct_new_gravity() 10 3.188e-05 3.535e-05 4.292e-05 0.00% Castro::expand_state() 10 1.717e-05 2.178e-05 2.593e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.033e-05 1.391e-05 2.155e-05 0.00% Castro::post_timestep() 10 1.418e-05 1.648e-05 1.913e-05 0.00% Castro::post_init() 1 1.451e-05 1.573e-05 1.839e-05 0.00% Castro::computeNewDt() 9 8.528e-06 9.381e-06 1.065e-05 0.00% Amr::InitializeInit() 1 2.795e-06 3.734e-06 5.382e-06 0.00% Castro::computeInitialDt() 2 2.995e-06 3.393e-06 3.677e-06 0.00% Amr::initialInit() 1 1.646e-06 2.053e-06 2.706e-06 0.00% Amr::init() 1 1.83e-06 2.35e-06 2.69e-06 0.00% Other 256 0.01069 0.01589 0.01898 0.56% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.402 3.405 3.407 100.00% Amr::coarseTimeStep() 10 3.203 3.203 3.203 94.00% Amr::timeStep() 10 3.191 3.192 3.192 93.70% Castro::advance() 10 3.175 3.176 3.176 93.22% Castro::subcycle_advance_ctu() 10 3.101 3.105 3.119 91.54% Castro::do_advance_ctu() 10 3.101 3.105 3.119 91.54% Castro::construct_ctu_hydro_source() 10 2.354 2.361 2.365 69.40% Gravity::make_radial_gravity() 21 0.3122 0.3182 0.3272 9.60% AmrLevel::FillPatch() 41 0.1926 0.2079 0.2328 6.83% Gravity::get_new_grav_vector() 11 0.2041 0.2053 0.2065 6.06% FillPatchIterator::Initialize 41 0.1629 0.1758 0.2058 6.04% Castro::construct_old_gravity() 10 0.1895 0.1947 0.2048 6.01% Gravity::get_old_grav_vector() 10 0.1888 0.1938 0.2041 5.99% Amr::init() 1 0.1873 0.1907 0.1922 5.64% Castro::initialize_do_advance() 10 0.1602 0.1739 0.1872 5.49% Castro::construct_new_gravity() 10 0.1793 0.1803 0.1815 5.33% Amr::initialInit() 1 0.1725 0.1759 0.1776 5.21% FillPatchIterator::FillFromLevel0() 41 0.1213 0.1335 0.1702 5.00% FillPatchSingleLevel 41 0.1212 0.1334 0.1701 4.99% check_for_negative_density() 10 0.06169 0.1235 0.1558 4.57% Amr::InitializeInit() 1 0.06097 0.1016 0.1472 4.32% Amr::defBaseLevel() 1 0.06096 0.1016 0.1472 4.32% Castro::expand_state() 10 0.1064 0.1165 0.1373 4.03% FabArray::ParallelCopy() 41 0.09057 0.1012 0.1307 3.84% Castro::clean_state() 62 0.1115 0.1181 0.1287 3.78% Castro::initData() 1 0.04071 0.08013 0.1256 3.69% Amr::FinalizeInit() 1 0.02874 0.07435 0.1161 3.41% Castro::estTimeStep() 21 0.02041 0.07211 0.1153 3.38% Castro::do_old_sources() 10 0.09284 0.09911 0.1053 3.09% FabArray::ParallelCopy_finish() 41 0.05014 0.06152 0.09641 2.83% Castro::computeInitialDt() 2 0.002153 0.0478 0.08945 2.63% amrex::Copy() 193 0.06355 0.07874 0.08862 2.60% FabArray::setVal() 143 0.05546 0.06578 0.07233 2.12% Castro::initialize_advance() 10 0.053 0.06779 0.07172 2.10% Castro::computeTemp() 63 0.05933 0.0656 0.07145 2.10% Castro::do_new_sources() 10 0.05741 0.06246 0.06789 1.99% Castro::normalize_species() 62 0.04481 0.04705 0.05229 1.53% Castro::reset_internal_energy(MultiFab) 63 0.04206 0.04731 0.05208 1.53% Castro::reset_internal_energy(Fab) 1008 0.04176 0.04702 0.05179 1.52% FabArray::ParallelCopy_nowait() 41 0.03424 0.03962 0.04189 1.23% StateDataPhysBCFunct::() 41 0.02872 0.03215 0.03929 1.15% StateData::FillBoundary(geom) 41 0.02859 0.03204 0.03917 1.15% Castro::construct_new_source() 50 0.0286 0.02981 0.03275 0.96% Gravity::interpolate_monopole_grav() 21 0.02636 0.02668 0.02704 0.79% Castro::construct_new_gravity_source() 10 0.02269 0.02378 0.0265 0.78% Castro::post_init() 1 0.0258 0.02603 0.02621 0.77% Amr::writePlotFile() 2 0.02225 0.02234 0.02278 0.67% Castro::finalize_do_advance() 10 0.01101 0.01697 0.02167 0.64% Castro::check_for_nan() 20 0.01048 0.0131 0.01945 0.57% MultiFab::contains_nan() 20 0.01046 0.01306 0.01938 0.57% FabArray::setDomainBndry() 41 0.007803 0.01057 0.01697 0.50% Castro::post_timestep() 10 0.01516 0.01575 0.01635 0.48% Castro::Castro() 1 0.01002 0.01148 0.01499 0.44% Castro::apply_source_to_state() 20 0.01017 0.01212 0.01335 0.39% FabArray::Saxpy() 20 0.01013 0.01207 0.01329 0.39% VisMF::Write(FabArray) 2 0.008362 0.009602 0.01204 0.35% Castro::initMFs() 1 0.006524 0.007891 0.01083 0.32% Castro::construct_old_source() 50 0.006535 0.008908 0.009854 0.29% Castro::construct_old_gravity_source() 10 0.006491 0.008847 0.009792 0.29% Castro::computeNewDt() 9 0.008456 0.00848 0.008495 0.25% AmrLevel::AmrLevel(dm) 1 0.005535 0.006436 0.008304 0.24% StateData::define() 4 0.005521 0.006422 0.008283 0.24% Other 256 0.01518 0.02423 0.02943 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 31 B 37 B 46 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8652 KiB 8660 KiB 8664 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6727 KiB 6736 KiB 6743 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7124 KiB 7134 KiB 7141 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4545 KiB 4554 KiB 4576 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 213 KiB 231 KiB 265 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2793 KiB 2797 KiB 2800 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 233 KiB 238 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 41 KiB 45 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2025 KiB 2027 KiB 2028 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 76 KiB 77 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 71 KiB 73 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized