Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:17:49 UTC on 2025-08-21. Successfully read inputs file ... Castro git describe: 25.08-12-gf8a308cc1 AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.08-5-g5e63b7a9 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014723337 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.337450135 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.338479398 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316498359 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.313221818 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.356409732 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.309253324 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298378354 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.304970227 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.301641511 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300883518 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007472049 seconds Ending run at 05:17:52 UTC on 2025-08-21. Run time = 3.362537571 Run time without initialization = 3.190046726 Average number of zones advanced per microsecond: 0.822 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3612 ... 3.3623 ... 3.3631 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2181 2.2513 2.2954 68.25% Gravity::make_radial_gravity() 21 0.2883 0.294 0.3075 9.14% check_for_negative_density() 10 0.03437 0.08195 0.1143 3.40% Castro::initData() 1 0.03752 0.07189 0.1079 3.21% Castro::estTimeStep() 21 0.02946 0.06506 0.1033 3.07% amrex::Copy() 193 0.06428 0.07907 0.08738 2.60% FabArray::ParallelCopy_finish() 41 0.03707 0.04655 0.08235 2.45% FabArray::setVal() 143 0.05562 0.06616 0.07169 2.13% Castro::normalize_species() 62 0.04472 0.0459 0.04792 1.42% Castro::reset_internal_energy(Fab) 1008 0.04505 0.04647 0.04776 1.42% FabArray::ParallelCopy_nowait() 41 0.0359 0.04129 0.0433 1.29% FillPatchIterator::Initialize 41 0.02745 0.03234 0.03464 1.03% StateData::FillBoundary(geom) 41 0.02816 0.03101 0.03317 0.99% Gravity::interpolate_monopole_grav() 21 0.02636 0.02659 0.02676 0.80% Castro::construct_new_gravity_source() 10 0.02307 0.02449 0.02671 0.79% Castro::computeTemp() 63 0.01801 0.01839 0.01904 0.57% Castro::initialize_do_advance() 10 0.01185 0.01662 0.01805 0.54% Castro::initialize_advance() 10 0.005405 0.01072 0.01404 0.42% FabArray::Saxpy() 20 0.01055 0.01262 0.01373 0.41% Amr::writePlotFile() 2 0.007546 0.01032 0.01298 0.39% FabArray::setDomainBndry() 41 0.007062 0.01038 0.01286 0.38% MultiFab::contains_nan() 20 0.01072 0.01145 0.01271 0.38% VisMF::Write(FabArray) 2 0.008244 0.009634 0.0121 0.36% Castro::construct_old_gravity_source() 10 0.006955 0.009619 0.01016 0.30% Castro::initMFs() 1 0.006673 0.007151 0.008396 0.25% Castro::construct_new_source() 50 0.005801 0.006059 0.006447 0.19% main() 1 0.003838 0.004361 0.004799 0.14% Gravity::get_new_grav_vector() 11 0.00269 0.003452 0.003823 0.11% Amr::coarseTimeStep() 10 0.001271 0.002508 0.003325 0.10% Gravity::get_old_grav_vector() 10 0.001683 0.002041 0.002481 0.07% Castro::finalize_do_advance() 10 0.000539 0.001304 0.001848 0.05% AmrLevel::FillPatch() 41 0.0007433 0.0009391 0.001177 0.04% Amr::timeStep() 10 0.0001432 0.0001881 0.0004164 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000272 0.0002934 0.0003264 0.01% Castro::do_advance_ctu() 10 0.0001442 0.0001662 0.0001927 0.01% Castro::clean_state() 62 0.0001519 0.000164 0.0001721 0.01% StateDataPhysBCFunct::() 41 9.896e-05 0.0001197 0.000153 0.00% FillPatchIterator::FillFromLevel0() 41 9.61e-05 0.0001045 0.0001118 0.00% Castro::do_old_sources() 10 8.466e-05 9.376e-05 0.0001107 0.00% FabArray::ParallelCopy() 41 8.685e-05 9.189e-05 0.0001054 0.00% Castro::Castro() 1 4.339e-05 7.305e-05 8.93e-05 0.00% Castro::construct_old_source() 50 5.351e-05 6.713e-05 8.049e-05 0.00% FillPatchSingleLevel 41 6.339e-05 6.856e-05 7.708e-05 0.00% Castro::do_new_sources() 10 5.456e-05 6.136e-05 7.216e-05 0.00% Amr::FinalizeInit() 1 3.661e-06 1.26e-05 6.683e-05 0.00% Castro::apply_source_to_state() 20 3.949e-05 5.261e-05 6.15e-05 0.00% Amr::defBaseLevel() 1 3.878e-05 4.55e-05 5.513e-05 0.00% Castro::advance() 10 4.056e-05 4.68e-05 5.398e-05 0.00% Castro::subcycle_advance_ctu() 10 3.974e-05 4.869e-05 5.224e-05 0.00% Castro::construct_old_gravity() 10 3.561e-05 3.885e-05 4.518e-05 0.00% Castro::construct_new_gravity() 10 2.948e-05 3.487e-05 4.087e-05 0.00% Castro::check_for_nan() 20 2.148e-05 2.534e-05 2.752e-05 0.00% Castro::expand_state() 10 1.93e-05 2.372e-05 2.547e-05 0.00% Castro::post_timestep() 10 1.458e-05 1.644e-05 1.907e-05 0.00% Castro::post_init() 1 1.374e-05 1.493e-05 1.749e-05 0.00% Castro::computeNewDt() 9 8.285e-06 1.025e-05 1.279e-05 0.00% Amr::InitializeInit() 1 2.705e-06 3.617e-06 5.256e-06 0.00% Castro::computeInitialDt() 2 2.681e-06 3.337e-06 4.013e-06 0.00% Amr::init() 1 2.08e-06 2.46e-06 3.383e-06 0.00% Amr::initialInit() 1 1.412e-06 2.047e-06 2.563e-06 0.00% Other 261 0.01611 0.01879 0.02085 0.62% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.361 3.362 3.363 100.00% Amr::coarseTimeStep() 10 3.178 3.178 3.178 94.49% Amr::timeStep() 10 3.165 3.166 3.167 94.16% Castro::advance() 10 3.149 3.149 3.15 93.66% Castro::subcycle_advance_ctu() 10 3.073 3.078 3.092 91.93% Castro::do_advance_ctu() 10 3.073 3.078 3.091 91.92% Castro::construct_ctu_hydro_source() 10 2.352 2.355 2.359 70.16% Gravity::make_radial_gravity() 21 0.3047 0.3104 0.3205 9.53% Gravity::get_new_grav_vector() 11 0.2042 0.2067 0.208 6.19% AmrLevel::FillPatch() 41 0.181 0.1945 0.2078 6.18% Castro::construct_old_gravity() 10 0.1775 0.1836 0.1931 5.74% Gravity::get_old_grav_vector() 10 0.1768 0.183 0.1925 5.72% Castro::construct_new_gravity() 10 0.1826 0.1842 0.1848 5.50% FillPatchIterator::Initialize 41 0.1511 0.1621 0.1823 5.42% Amr::init() 1 0.1715 0.1723 0.1727 5.13% Castro::initialize_do_advance() 10 0.1556 0.1639 0.1681 5.00% Amr::initialInit() 1 0.1561 0.1573 0.1578 4.69% FillPatchIterator::FillFromLevel0() 41 0.1104 0.1193 0.1478 4.40% FillPatchSingleLevel 41 0.1103 0.1192 0.1477 4.39% Amr::InitializeInit() 1 0.05927 0.09355 0.1301 3.87% Amr::defBaseLevel() 1 0.05927 0.09354 0.1301 3.87% Castro::clean_state() 62 0.1133 0.1165 0.1202 3.58% Castro::expand_state() 10 0.1006 0.1099 0.12 3.57% FabArray::ParallelCopy() 41 0.0792 0.08804 0.1185 3.52% check_for_negative_density() 10 0.03437 0.08195 0.1143 3.40% Castro::initData() 1 0.04151 0.07575 0.1117 3.32% Castro::estTimeStep() 21 0.02946 0.06506 0.1033 3.07% Amr::FinalizeInit() 1 0.02601 0.06372 0.09844 2.93% Castro::do_old_sources() 10 0.08982 0.09322 0.09589 2.85% amrex::Copy() 193 0.06428 0.07907 0.08738 2.60% FabArray::ParallelCopy_finish() 41 0.03707 0.04655 0.08235 2.45% Castro::computeInitialDt() 2 0.002067 0.03931 0.07396 2.20% Castro::initialize_advance() 10 0.05391 0.06828 0.07303 2.17% FabArray::setVal() 143 0.05562 0.06616 0.07169 2.13% Castro::do_new_sources() 10 0.0605 0.06396 0.06868 2.04% Castro::computeTemp() 63 0.06334 0.06515 0.06706 1.99% Castro::reset_internal_energy(MultiFab) 63 0.04532 0.04676 0.04804 1.43% Castro::normalize_species() 62 0.04472 0.0459 0.04792 1.42% Castro::reset_internal_energy(Fab) 1008 0.04505 0.04647 0.04776 1.42% FabArray::ParallelCopy_nowait() 41 0.03604 0.0414 0.04339 1.29% StateDataPhysBCFunct::() 41 0.02828 0.03113 0.03327 0.99% StateData::FillBoundary(geom) 41 0.02816 0.03101 0.03317 0.99% Castro::construct_new_source() 50 0.02896 0.03055 0.03277 0.97% Gravity::interpolate_monopole_grav() 21 0.02636 0.02659 0.02676 0.80% Castro::construct_new_gravity_source() 10 0.02307 0.02449 0.02671 0.79% Castro::post_init() 1 0.0236 0.0239 0.02404 0.71% Amr::writePlotFile() 2 0.02242 0.02256 0.02303 0.68% Castro::finalize_do_advance() 10 0.01345 0.01836 0.02216 0.66% Castro::post_timestep() 10 0.01531 0.01594 0.0169 0.50% Castro::apply_source_to_state() 20 0.01059 0.01267 0.01378 0.41% FabArray::Saxpy() 20 0.01055 0.01262 0.01373 0.41% FabArray::setDomainBndry() 41 0.007062 0.01038 0.01286 0.38% Castro::check_for_nan() 20 0.01075 0.01148 0.01274 0.38% MultiFab::contains_nan() 20 0.01072 0.01145 0.01271 0.38% VisMF::Write(FabArray) 2 0.008244 0.009634 0.0121 0.36% Castro::Castro() 1 0.01052 0.01118 0.01202 0.36% Castro::construct_old_source() 50 0.007008 0.009687 0.01023 0.30% Castro::construct_old_gravity_source() 10 0.006955 0.009619 0.01016 0.30% Castro::computeNewDt() 9 0.008683 0.008702 0.008714 0.26% Castro::initMFs() 1 0.006673 0.007151 0.008396 0.25% Other 261 0.02616 0.03014 0.03335 0.99% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 36 B 44 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8658 KiB 8668 KiB 8671 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6761 KiB 6769 KiB 6774 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7130 KiB 7139 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4564 KiB 4572 KiB 4595 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 201 KiB 219 KiB 237 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2806 KiB 2809 KiB 2810 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 230 KiB 235 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 36 KiB 40 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2026 KiB 2029 KiB 2029 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 78 KiB 78 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 67 KiB 69 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized