Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:17:42 UTC on 2025-08-27. Successfully read inputs file ... Castro git describe: 25.08-15-gbe8cc1969 AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.08-5-g5e63b7a9 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014245851 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.343758881 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.328046522 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.313240718 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.314778338 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.352021527 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.303386069 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.297758715 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.298486645 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.297417442 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.33607503 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007562165 seconds Ending run at 05:17:46 UTC on 2025-08-27. Run time = 3.366520063 Run time without initialization = 3.197468397 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3654 ... 3.3660 ... 3.3665 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1947 2.2361 2.2892 68.00% Gravity::make_radial_gravity() 21 0.2918 0.2984 0.3159 9.38% check_for_negative_density() 10 0.0554 0.1058 0.1458 4.33% Castro::initData() 1 0.03767 0.07224 0.1054 3.13% Castro::estTimeStep() 21 0.02241 0.06058 0.09798 2.91% FabArray::ParallelCopy_finish() 41 0.03771 0.04712 0.0865 2.57% amrex::Copy() 193 0.06307 0.07784 0.08554 2.54% FabArray::setVal() 143 0.05184 0.06552 0.0701 2.08% Castro::normalize_species() 62 0.04583 0.04659 0.04759 1.41% Castro::reset_internal_energy(Fab) 1008 0.04122 0.04488 0.04675 1.39% FabArray::ParallelCopy_nowait() 41 0.0364 0.04119 0.04312 1.28% FillPatchIterator::Initialize 41 0.02766 0.03201 0.03448 1.02% StateData::FillBoundary(geom) 41 0.02804 0.03086 0.03297 0.98% Gravity::interpolate_monopole_grav() 21 0.02652 0.02683 0.02704 0.80% Castro::construct_new_gravity_source() 10 0.02317 0.02462 0.02624 0.78% Castro::computeTemp() 63 0.01683 0.01795 0.01852 0.55% Castro::initialize_do_advance() 10 0.01157 0.01614 0.01745 0.52% Castro::initialize_advance() 10 0.005352 0.01069 0.01376 0.41% FabArray::Saxpy() 20 0.01068 0.01261 0.01347 0.40% VisMF::Write(FabArray) 2 0.009179 0.009737 0.01283 0.38% FabArray::setDomainBndry() 41 0.00676 0.01024 0.01276 0.38% MultiFab::contains_nan() 20 0.01022 0.01121 0.01228 0.36% Castro::construct_old_gravity_source() 10 0.007059 0.009658 0.01025 0.30% Amr::writePlotFile() 2 0.007369 0.009356 0.009833 0.29% Castro::initMFs() 1 0.006581 0.007056 0.008353 0.25% Castro::construct_new_source() 50 0.00594 0.006171 0.006444 0.19% Castro::enforce_min_density() 62 0.005963 0.006165 0.006394 0.19% main() 1 0.003873 0.004075 0.004278 0.13% Gravity::get_new_grav_vector() 11 0.002745 0.003243 0.003604 0.11% Amr::coarseTimeStep() 10 0.001343 0.002193 0.003176 0.09% Gravity::get_old_grav_vector() 10 0.001503 0.002007 0.002442 0.07% Castro::finalize_do_advance() 10 0.0005476 0.001134 0.001267 0.04% AmrLevel::FillPatch() 41 0.0007964 0.0009038 0.001092 0.03% Amr::timeStep() 10 0.0001317 0.0001923 0.0004223 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002778 0.0002912 0.0003297 0.01% Castro::do_advance_ctu() 10 0.0001487 0.0001686 0.0001885 0.01% Castro::clean_state() 62 0.0001444 0.0001613 0.0001769 0.01% StateDataPhysBCFunct::() 41 9.911e-05 0.0001106 0.0001318 0.00% FillPatchIterator::FillFromLevel0() 41 9.837e-05 0.0001114 0.000126 0.00% Castro::do_old_sources() 10 7.938e-05 9.437e-05 0.00011 0.00% FabArray::ParallelCopy() 41 8.35e-05 9.196e-05 9.98e-05 0.00% Castro::Castro() 1 4.578e-05 6.811e-05 9.324e-05 0.00% Amr::FinalizeInit() 1 3.18e-06 1.372e-05 8.332e-05 0.00% Castro::construct_old_source() 50 5.553e-05 6.982e-05 7.753e-05 0.00% FillPatchSingleLevel 41 6.355e-05 6.905e-05 7.473e-05 0.00% Castro::do_new_sources() 10 5.486e-05 6.452e-05 6.794e-05 0.00% Castro::apply_source_to_state() 20 4.29e-05 5.487e-05 6.258e-05 0.00% Castro::subcycle_advance_ctu() 10 4.636e-05 5.174e-05 6.071e-05 0.00% Amr::defBaseLevel() 1 4.22e-05 5.209e-05 5.756e-05 0.00% Castro::advance() 10 3.937e-05 4.621e-05 5.443e-05 0.00% Castro::construct_old_gravity() 10 3.091e-05 4.165e-05 5.069e-05 0.00% Castro::construct_new_gravity() 10 3.296e-05 3.792e-05 4.804e-05 0.00% Castro::expand_state() 10 1.988e-05 2.392e-05 2.817e-05 0.00% Castro::check_for_nan() 20 2.39e-05 2.57e-05 2.797e-05 0.00% Castro::post_init() 1 1.367e-05 1.664e-05 2.023e-05 0.00% Castro::post_timestep() 10 1.426e-05 1.602e-05 1.824e-05 0.00% Castro::computeNewDt() 9 8.821e-06 1.002e-05 1.255e-05 0.00% Amr::InitializeInit() 1 2.601e-06 3.541e-06 7e-06 0.00% Amr::init() 1 1.841e-06 2.877e-06 5.896e-06 0.00% Castro::computeInitialDt() 2 2.727e-06 3.381e-06 4.361e-06 0.00% Amr::initialInit() 1 1.671e-06 2.24e-06 3.029e-06 0.00% Other 199 0.009343 0.01299 0.01483 0.44% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.365 3.366 3.367 100.00% Amr::coarseTimeStep() 10 3.186 3.186 3.186 94.63% Amr::timeStep() 10 3.173 3.174 3.175 94.30% Castro::advance() 10 3.157 3.158 3.158 93.81% Castro::subcycle_advance_ctu() 10 3.082 3.086 3.103 92.18% Castro::do_advance_ctu() 10 3.082 3.086 3.103 92.18% Castro::construct_ctu_hydro_source() 10 2.36 2.363 2.366 70.29% Gravity::make_radial_gravity() 21 0.3074 0.314 0.329 9.77% Gravity::get_new_grav_vector() 11 0.2093 0.2107 0.2124 6.31% AmrLevel::FillPatch() 41 0.1779 0.1939 0.2102 6.24% Castro::construct_old_gravity() 10 0.178 0.1838 0.1973 5.86% Gravity::get_old_grav_vector() 10 0.1773 0.1831 0.1967 5.84% Castro::construct_new_gravity() 10 0.1873 0.1882 0.1892 5.62% FillPatchIterator::Initialize 41 0.1483 0.1619 0.1859 5.52% Amr::init() 1 0.1673 0.1683 0.1687 5.01% Castro::initialize_do_advance() 10 0.1544 0.1616 0.1661 4.93% Amr::initialInit() 1 0.1529 0.1542 0.1548 4.60% FillPatchIterator::FillFromLevel0() 41 0.111 0.1197 0.1515 4.50% FillPatchSingleLevel 41 0.1109 0.1195 0.1514 4.50% check_for_negative_density() 10 0.0554 0.1058 0.1458 4.33% Amr::InitializeInit() 1 0.05964 0.09399 0.1274 3.79% Amr::defBaseLevel() 1 0.05963 0.09399 0.1274 3.79% FabArray::ParallelCopy() 41 0.0796 0.08851 0.1231 3.66% Castro::clean_state() 62 0.1099 0.1152 0.1184 3.52% Castro::expand_state() 10 0.1011 0.109 0.1178 3.50% Castro::initData() 1 0.04159 0.07607 0.1086 3.23% Castro::estTimeStep() 21 0.02241 0.06058 0.09798 2.91% Castro::do_old_sources() 10 0.08893 0.09301 0.09562 2.84% Amr::FinalizeInit() 1 0.02637 0.06025 0.09513 2.83% FabArray::ParallelCopy_finish() 41 0.03771 0.04712 0.0865 2.57% amrex::Copy() 193 0.06307 0.07784 0.08554 2.54% Castro::initialize_advance() 10 0.05075 0.06813 0.07303 2.17% Castro::computeInitialDt() 2 0.002064 0.03593 0.0707 2.10% FabArray::setVal() 143 0.05184 0.06552 0.0701 2.08% Castro::do_new_sources() 10 0.06035 0.06385 0.0687 2.04% Castro::computeTemp() 63 0.05832 0.06312 0.06557 1.95% Castro::normalize_species() 62 0.04583 0.04659 0.04759 1.41% Castro::reset_internal_energy(MultiFab) 63 0.0415 0.04517 0.04704 1.40% Castro::reset_internal_energy(Fab) 1008 0.04122 0.04488 0.04675 1.39% FabArray::ParallelCopy_nowait() 41 0.03655 0.04129 0.04322 1.28% StateDataPhysBCFunct::() 41 0.02814 0.03097 0.03308 0.98% StateData::FillBoundary(geom) 41 0.02804 0.03086 0.03297 0.98% Castro::construct_new_source() 50 0.02911 0.03079 0.03265 0.97% Gravity::interpolate_monopole_grav() 21 0.02652 0.02683 0.02704 0.80% Castro::construct_new_gravity_source() 10 0.02317 0.02462 0.02624 0.78% Castro::post_init() 1 0.02333 0.02379 0.02401 0.71% Amr::writePlotFile() 2 0.02159 0.02171 0.02206 0.66% Castro::finalize_do_advance() 10 0.01243 0.01716 0.02074 0.62% Castro::post_timestep() 10 0.01486 0.01576 0.01641 0.49% Castro::apply_source_to_state() 20 0.01072 0.01267 0.01352 0.40% FabArray::Saxpy() 20 0.01068 0.01261 0.01347 0.40% VisMF::Write(FabArray) 2 0.009179 0.009737 0.01283 0.38% FabArray::setDomainBndry() 41 0.00676 0.01024 0.01276 0.38% Castro::check_for_nan() 20 0.01025 0.01123 0.01231 0.37% MultiFab::contains_nan() 20 0.01022 0.01121 0.01228 0.36% Castro::Castro() 1 0.01066 0.01105 0.01191 0.35% Castro::construct_old_source() 50 0.007115 0.009728 0.01032 0.31% Castro::construct_old_gravity_source() 10 0.007059 0.009658 0.01025 0.30% Castro::computeNewDt() 9 0.008622 0.008637 0.008658 0.26% Castro::initMFs() 1 0.006581 0.007056 0.008353 0.25% Castro::enforce_min_density() 62 0.005963 0.006165 0.006394 0.19% Other 199 0.01943 0.02464 0.02772 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 33 B 37 B 41 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8659 KiB 8669 KiB 8673 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6776 KiB 6779 KiB 6780 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7139 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4574 KiB 4580 KiB 4602 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 200 KiB 217 KiB 236 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2810 KiB 2813 KiB 2815 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 232 KiB 237 KiB 249 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 36 KiB 40 KiB 57 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 79 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 67 KiB 69 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized