Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:17:40 UTC on 2025-08-29. Successfully read inputs file ... Castro git describe: 25.08-15-gbe8cc1969 AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.08-5-g5e63b7a9 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014122578 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.34392212 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.32508397 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.323727157 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.348893414 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.367717304 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.305947402 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298181882 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.297521641 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.2973721 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.296704041 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00757755 seconds Ending run at 05:17:44 UTC on 2025-08-29. Run time = 3.395518337 Run time without initialization = 3.217771418 Average number of zones advanced per microsecond: 0.815 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3941 ... 3.3947 ... 3.3956 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1998 2.2397 2.2847 67.29% Gravity::make_radial_gravity() 21 0.2931 0.3009 0.3148 9.27% check_for_negative_density() 10 0.0499 0.09691 0.1403 4.13% Castro::initData() 1 0.03719 0.07634 0.1138 3.35% Castro::estTimeStep() 21 0.03077 0.067 0.1075 3.16% FabArray::ParallelCopy_finish() 41 0.03753 0.05911 0.09621 2.83% amrex::Copy() 193 0.06669 0.08127 0.09322 2.75% FabArray::setVal() 143 0.05461 0.06568 0.07199 2.12% Castro::normalize_species() 62 0.04551 0.04859 0.05211 1.53% Castro::reset_internal_energy(Fab) 1008 0.04505 0.04672 0.04888 1.44% FabArray::ParallelCopy_nowait() 41 0.0353 0.0406 0.0428 1.26% FillPatchIterator::Initialize 41 0.0285 0.03249 0.03555 1.05% StateData::FillBoundary(geom) 41 0.02843 0.03129 0.03536 1.04% Gravity::interpolate_monopole_grav() 21 0.02679 0.02729 0.02915 0.86% Castro::construct_new_gravity_source() 10 0.02224 0.02356 0.02565 0.76% Castro::computeTemp() 63 0.01778 0.01853 0.01927 0.57% Castro::initialize_do_advance() 10 0.01161 0.01665 0.0181 0.53% Castro::initialize_advance() 10 0.005354 0.01084 0.01357 0.40% FabArray::Saxpy() 20 0.01034 0.01199 0.01295 0.38% MultiFab::contains_nan() 20 0.01045 0.01135 0.01287 0.38% FabArray::setDomainBndry() 41 0.007176 0.01017 0.01262 0.37% Amr::writePlotFile() 2 0.007532 0.01005 0.01207 0.36% VisMF::Write(FabArray) 2 0.008626 0.009388 0.01171 0.34% Castro::construct_old_gravity_source() 10 0.006327 0.008621 0.009215 0.27% Castro::initMFs() 1 0.00646 0.007177 0.007648 0.23% Castro::enforce_min_density() 62 0.005903 0.006222 0.006564 0.19% Castro::construct_new_source() 50 0.00563 0.006147 0.006302 0.19% main() 1 0.003621 0.003961 0.004614 0.14% Amr::coarseTimeStep() 10 0.00148 0.003611 0.004585 0.14% Gravity::get_new_grav_vector() 11 0.003066 0.003352 0.003615 0.11% Gravity::get_old_grav_vector() 10 0.001625 0.002036 0.002434 0.07% Castro::finalize_do_advance() 10 0.0006218 0.001246 0.001826 0.05% AmrLevel::FillPatch() 41 0.0008276 0.0009515 0.001255 0.04% Amr::timeStep() 10 0.0001367 0.0001983 0.0004191 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002727 0.0002928 0.0003161 0.01% Castro::do_advance_ctu() 10 0.0001387 0.0001688 0.0001947 0.01% Castro::clean_state() 62 0.0001413 0.000159 0.0001735 0.01% StateDataPhysBCFunct::() 41 0.0001028 0.00012 0.0001366 0.00% FillPatchIterator::FillFromLevel0() 41 9.875e-05 0.0001058 0.0001155 0.00% FabArray::ParallelCopy() 41 8.607e-05 9.671e-05 0.0001101 0.00% Castro::do_old_sources() 10 7.684e-05 8.784e-05 0.0001019 0.00% Castro::construct_old_source() 50 5.779e-05 6.315e-05 7.594e-05 0.00% FillPatchSingleLevel 41 6.591e-05 6.987e-05 7.569e-05 0.00% Amr::FinalizeInit() 1 3.615e-06 1.286e-05 7.369e-05 0.00% Castro::Castro() 1 5.7e-05 6.326e-05 6.901e-05 0.00% Castro::do_new_sources() 10 5.523e-05 6.077e-05 6.566e-05 0.00% Castro::construct_old_gravity() 10 3.467e-05 4.212e-05 6.408e-05 0.00% Amr::defBaseLevel() 1 4.715e-05 5.087e-05 5.942e-05 0.00% Castro::apply_source_to_state() 20 4.281e-05 5.133e-05 5.83e-05 0.00% Castro::advance() 10 4.373e-05 4.904e-05 5.732e-05 0.00% Castro::subcycle_advance_ctu() 10 4.331e-05 5.072e-05 5.701e-05 0.00% Castro::construct_new_gravity() 10 2.971e-05 3.714e-05 5.165e-05 0.00% Castro::expand_state() 10 2.149e-05 2.479e-05 2.936e-05 0.00% Castro::check_for_nan() 20 2.387e-05 2.547e-05 2.829e-05 0.00% Castro::post_init() 1 1.551e-05 1.755e-05 2.1e-05 0.00% Castro::post_timestep() 10 1.381e-05 1.671e-05 1.862e-05 0.00% Castro::computeNewDt() 9 9.279e-06 1.022e-05 1.155e-05 0.00% Amr::InitializeInit() 1 2.758e-06 3.698e-06 7.688e-06 0.00% Castro::computeInitialDt() 2 3.117e-06 3.589e-06 4.001e-06 0.00% Amr::init() 1 1.952e-06 2.458e-06 3.532e-06 0.00% Amr::initialInit() 1 1.69e-06 2.07e-06 2.803e-06 0.00% Other 199 0.01048 0.01302 0.0149 0.44% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.394 3.395 3.396 100.00% Amr::coarseTimeStep() 10 3.206 3.206 3.206 94.41% Amr::timeStep() 10 3.191 3.192 3.194 94.07% Castro::advance() 10 3.175 3.175 3.176 93.53% Castro::subcycle_advance_ctu() 10 3.099 3.103 3.119 91.85% Castro::do_advance_ctu() 10 3.099 3.103 3.119 91.85% Castro::construct_ctu_hydro_source() 10 2.353 2.358 2.362 69.56% Gravity::make_radial_gravity() 21 0.3094 0.3176 0.3283 9.67% AmrLevel::FillPatch() 41 0.1846 0.2058 0.2206 6.50% Gravity::get_new_grav_vector() 11 0.2043 0.206 0.2082 6.13% Castro::construct_old_gravity() 10 0.1908 0.1972 0.2062 6.07% Gravity::get_old_grav_vector() 10 0.1902 0.1966 0.2055 6.05% FillPatchIterator::Initialize 41 0.1558 0.1742 0.1962 5.78% Castro::construct_new_gravity() 10 0.1824 0.1835 0.186 5.48% Amr::init() 1 0.1765 0.1771 0.1778 5.24% Castro::initialize_do_advance() 10 0.1566 0.1634 0.1702 5.01% Amr::initialInit() 1 0.1622 0.1627 0.1634 4.81% FillPatchIterator::FillFromLevel0() 41 0.1155 0.1315 0.1605 4.73% FillPatchSingleLevel 41 0.1154 0.1314 0.1604 4.73% check_for_negative_density() 10 0.0499 0.09691 0.1403 4.13% Amr::InitializeInit() 1 0.05952 0.09815 0.1361 4.01% Amr::defBaseLevel() 1 0.05952 0.09815 0.1361 4.01% FabArray::ParallelCopy() 41 0.07989 0.09991 0.1317 3.88% Castro::clean_state() 62 0.116 0.1196 0.1263 3.72% Castro::expand_state() 10 0.1026 0.1097 0.1228 3.62% Castro::initData() 1 0.04106 0.08037 0.1176 3.46% Castro::do_old_sources() 10 0.09196 0.1001 0.11 3.24% Castro::estTimeStep() 21 0.03077 0.067 0.1075 3.16% Amr::FinalizeInit() 1 0.02642 0.06451 0.103 3.03% FabArray::ParallelCopy_finish() 41 0.03753 0.05911 0.09621 2.83% amrex::Copy() 193 0.06669 0.08127 0.09322 2.75% Castro::computeInitialDt() 2 0.002164 0.04027 0.07882 2.32% Castro::initialize_advance() 10 0.05242 0.06861 0.07317 2.15% FabArray::setVal() 143 0.05461 0.06568 0.07199 2.12% Castro::do_new_sources() 10 0.05752 0.06314 0.0691 2.04% Castro::computeTemp() 63 0.06373 0.06554 0.06845 2.02% Castro::normalize_species() 62 0.04551 0.04859 0.05211 1.53% Castro::reset_internal_energy(MultiFab) 63 0.04533 0.04701 0.04918 1.45% Castro::reset_internal_energy(Fab) 1008 0.04505 0.04672 0.04888 1.44% FabArray::ParallelCopy_nowait() 41 0.03543 0.04071 0.04289 1.26% StateDataPhysBCFunct::() 41 0.02855 0.03141 0.03548 1.04% StateData::FillBoundary(geom) 41 0.02843 0.03129 0.03536 1.04% Castro::construct_new_source() 50 0.02787 0.02971 0.03192 0.94% Gravity::interpolate_monopole_grav() 21 0.02679 0.02729 0.02915 0.86% Castro::construct_new_gravity_source() 10 0.02224 0.02356 0.02565 0.76% Castro::finalize_do_advance() 10 0.01319 0.01902 0.02451 0.72% Castro::post_init() 1 0.02342 0.02366 0.02384 0.70% Amr::writePlotFile() 2 0.02198 0.0221 0.02252 0.66% Castro::post_timestep() 10 0.01582 0.01664 0.01807 0.53% Castro::apply_source_to_state() 20 0.0104 0.01204 0.01301 0.38% FabArray::Saxpy() 20 0.01034 0.01199 0.01295 0.38% Castro::check_for_nan() 20 0.01048 0.01138 0.0129 0.38% MultiFab::contains_nan() 20 0.01045 0.01135 0.01287 0.38% FabArray::setDomainBndry() 41 0.007176 0.01017 0.01262 0.37% Castro::Castro() 1 0.009549 0.01091 0.01174 0.35% VisMF::Write(FabArray) 2 0.008626 0.009388 0.01171 0.34% Castro::construct_old_source() 50 0.006385 0.008685 0.009291 0.27% Castro::construct_old_gravity_source() 10 0.006327 0.008621 0.009215 0.27% Castro::computeNewDt() 9 0.008915 0.008975 0.009006 0.27% Castro::initMFs() 1 0.00646 0.007177 0.007648 0.23% Castro::enforce_min_density() 62 0.005903 0.006222 0.006564 0.19% Other 199 0.02068 0.02479 0.02809 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 32 B 37 B 48 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8658 KiB 8668 KiB 8671 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6757 KiB 6762 KiB 6765 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7139 KiB 7141 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4560 KiB 4566 KiB 4589 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 203 KiB 224 KiB 245 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2802 KiB 2805 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 232 KiB 238 KiB 246 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 35 KiB 43 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2029 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 77 KiB 77 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 71 KiB 74 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized