Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:17:41 UTC on 2025-09-10. Successfully read inputs file ... Castro git describe: 25.09.1-5-gbb1a3961a AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.09-1-gf9ae8719 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014498588 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.334467186 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.345761899 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.319407636 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.31581785 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.358761011 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.308796053 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.296136755 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.302130852 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.301888828 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.299863415 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00768872 seconds Ending run at 05:17:44 UTC on 2025-09-10. Run time = 3.360315994 Run time without initialization = 3.196164803 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3589 ... 3.3599 ... 3.3609 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1888 2.2367 2.2935 68.24% Gravity::make_radial_gravity() 21 0.2859 0.2951 0.3107 9.25% check_for_negative_density() 10 0.0413 0.1028 0.1546 4.60% Castro::initData() 1 0.03843 0.07144 0.1015 3.02% Castro::estTimeStep() 21 0.02202 0.05759 0.09152 2.72% amrex::Copy() 193 0.06346 0.07723 0.08653 2.57% FabArray::ParallelCopy_finish() 41 0.0354 0.04648 0.0798 2.37% FabArray::setVal() 143 0.05594 0.06681 0.07315 2.18% Castro::normalize_species() 62 0.04491 0.04655 0.0555 1.65% Castro::reset_internal_energy(Fab) 1008 0.04273 0.04593 0.04741 1.41% FabArray::ParallelCopy_nowait() 41 0.03501 0.04085 0.04354 1.30% StateData::FillBoundary(geom) 41 0.02778 0.03132 0.03543 1.05% FillPatchIterator::Initialize 41 0.02629 0.0321 0.03493 1.04% Gravity::interpolate_monopole_grav() 21 0.02636 0.02673 0.02724 0.81% Castro::construct_new_gravity_source() 10 0.02334 0.02496 0.02661 0.79% Castro::computeTemp() 63 0.01712 0.01826 0.01881 0.56% Castro::initialize_do_advance() 10 0.01169 0.01624 0.01744 0.52% Castro::initialize_advance() 10 0.005321 0.01069 0.01381 0.41% FabArray::Saxpy() 20 0.01051 0.01242 0.01373 0.41% VisMF::Write(FabArray) 2 0.009233 0.009838 0.0132 0.39% FabArray::setDomainBndry() 41 0.006923 0.01023 0.01246 0.37% MultiFab::contains_nan() 20 0.01073 0.01159 0.01245 0.37% Amr::writePlotFile() 2 0.007398 0.009647 0.0102 0.30% Castro::construct_old_gravity_source() 10 0.006995 0.009454 0.01011 0.30% Castro::initMFs() 1 0.006619 0.007122 0.008246 0.25% Castro::construct_new_source() 50 0.005697 0.005969 0.006219 0.19% main() 1 0.003945 0.004274 0.004738 0.14% Gravity::get_new_grav_vector() 11 0.002838 0.003402 0.003728 0.11% Amr::coarseTimeStep() 10 0.001365 0.002988 0.003633 0.11% Gravity::get_old_grav_vector() 10 0.001606 0.00198 0.002615 0.08% Castro::finalize_do_advance() 10 0.0004835 0.001111 0.001332 0.04% AmrLevel::FillPatch() 41 0.0007097 0.001096 0.001244 0.04% Amr::timeStep() 10 0.0001451 0.0001872 0.0003956 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002737 0.0002909 0.000322 0.01% Castro::do_advance_ctu() 10 0.000136 0.0001722 0.0001958 0.01% Castro::clean_state() 62 0.0001407 0.0001583 0.0001746 0.01% StateDataPhysBCFunct::() 41 9.99e-05 0.0001164 0.0001342 0.00% FillPatchIterator::FillFromLevel0() 41 9.419e-05 0.0001065 0.0001187 0.00% Castro::do_old_sources() 10 7.084e-05 9.181e-05 0.000104 0.00% FabArray::ParallelCopy() 41 7.876e-05 9.334e-05 0.000103 0.00% Castro::Castro() 1 5.694e-05 8.186e-05 0.0001006 0.00% FillPatchSingleLevel 41 6.391e-05 6.903e-05 7.933e-05 0.00% Amr::FinalizeInit() 1 3.706e-06 1.364e-05 7.933e-05 0.00% Castro::construct_old_source() 50 4.999e-05 6.498e-05 7.45e-05 0.00% Castro::do_new_sources() 10 5.43e-05 6.234e-05 7.111e-05 0.00% Castro::apply_source_to_state() 20 4.324e-05 5.315e-05 6.446e-05 0.00% Amr::defBaseLevel() 1 3.85e-05 4.361e-05 5.264e-05 0.00% Castro::subcycle_advance_ctu() 10 4.286e-05 4.791e-05 5.207e-05 0.00% Castro::advance() 10 3.329e-05 4.499e-05 5.098e-05 0.00% Castro::construct_old_gravity() 10 3.467e-05 4.129e-05 4.598e-05 0.00% Castro::construct_new_gravity() 10 3.295e-05 3.774e-05 4.274e-05 0.00% Castro::check_for_nan() 20 2.17e-05 2.667e-05 3.201e-05 0.00% Castro::expand_state() 10 1.925e-05 2.263e-05 2.588e-05 0.00% Castro::post_timestep() 10 1.395e-05 1.723e-05 2.049e-05 0.00% Castro::post_init() 1 1.378e-05 1.579e-05 1.927e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.062e-05 1.219e-05 1.363e-05 0.00% Amr::init() 1 2.101e-06 3.623e-06 1.14e-05 0.00% Castro::computeNewDt() 9 9.142e-06 9.592e-06 1.046e-05 0.00% Amr::InitializeInit() 1 2.742e-06 3.564e-06 7.489e-06 0.00% Castro::computeInitialDt() 2 3.162e-06 3.581e-06 3.983e-06 0.00% Amr::initialInit() 1 1.729e-06 2.155e-06 2.626e-06 0.00% Other 260 0.01514 0.01916 0.02145 0.64% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.359 3.36 3.361 100.00% Amr::coarseTimeStep() 10 3.184 3.184 3.184 94.73% Amr::timeStep() 10 3.171 3.171 3.173 94.41% Castro::advance() 10 3.154 3.155 3.155 93.89% Castro::subcycle_advance_ctu() 10 3.079 3.083 3.096 92.11% Castro::do_advance_ctu() 10 3.079 3.083 3.096 92.11% Castro::construct_ctu_hydro_source() 10 2.356 2.361 2.367 70.42% Gravity::make_radial_gravity() 21 0.301 0.3109 0.3237 9.63% Gravity::get_new_grav_vector() 11 0.2024 0.2049 0.2061 6.13% AmrLevel::FillPatch() 41 0.1837 0.1932 0.2038 6.06% Castro::construct_old_gravity() 10 0.1779 0.1856 0.1981 5.89% Gravity::get_old_grav_vector() 10 0.1772 0.1849 0.1975 5.88% Castro::construct_new_gravity() 10 0.1804 0.1825 0.184 5.47% FillPatchIterator::Initialize 41 0.1521 0.1615 0.1763 5.24% Castro::initialize_do_advance() 10 0.1552 0.1619 0.1686 5.02% Amr::init() 1 0.163 0.1638 0.1645 4.90% check_for_negative_density() 10 0.0413 0.1028 0.1546 4.60% Amr::initialInit() 1 0.1484 0.1495 0.1503 4.47% FillPatchIterator::FillFromLevel0() 41 0.1119 0.1191 0.1431 4.26% FillPatchSingleLevel 41 0.1118 0.119 0.143 4.25% Castro::clean_state() 62 0.1109 0.1164 0.1253 3.73% Amr::InitializeInit() 1 0.05992 0.09358 0.1238 3.68% Amr::defBaseLevel() 1 0.05991 0.09357 0.1238 3.68% FabArray::ParallelCopy() 41 0.07751 0.08753 0.115 3.42% Castro::expand_state() 10 0.1004 0.1089 0.1149 3.42% Castro::initData() 1 0.04217 0.07539 0.1054 3.14% Castro::do_old_sources() 10 0.09034 0.09274 0.0964 2.87% Castro::estTimeStep() 21 0.02202 0.05759 0.09152 2.72% Amr::FinalizeInit() 1 0.02641 0.05592 0.0888 2.64% amrex::Copy() 193 0.06346 0.07723 0.08653 2.57% FabArray::ParallelCopy_finish() 41 0.0354 0.04648 0.0798 2.37% Castro::initialize_advance() 10 0.05524 0.06881 0.07316 2.18% FabArray::setVal() 143 0.05594 0.06681 0.07315 2.18% Castro::do_new_sources() 10 0.0609 0.06478 0.07025 2.09% Castro::computeTemp() 63 0.06014 0.06448 0.0661 1.97% Castro::computeInitialDt() 2 0.002111 0.03173 0.06462 1.92% Castro::normalize_species() 62 0.04491 0.04655 0.0555 1.65% Castro::reset_internal_energy(MultiFab) 63 0.04302 0.04622 0.04769 1.42% Castro::reset_internal_energy(Fab) 1008 0.04273 0.04593 0.04741 1.41% FabArray::ParallelCopy_nowait() 41 0.03513 0.04095 0.04363 1.30% StateDataPhysBCFunct::() 41 0.02789 0.03144 0.03554 1.06% StateData::FillBoundary(geom) 41 0.02778 0.03132 0.03543 1.05% Castro::construct_new_source() 50 0.02921 0.03092 0.03267 0.97% Gravity::interpolate_monopole_grav() 21 0.02636 0.02673 0.02724 0.81% Castro::construct_new_gravity_source() 10 0.02334 0.02496 0.02661 0.79% Castro::post_init() 1 0.02328 0.02364 0.02377 0.71% Castro::finalize_do_advance() 10 0.01253 0.01855 0.02326 0.69% Amr::writePlotFile() 2 0.02195 0.02207 0.02242 0.67% Castro::post_timestep() 10 0.01509 0.01607 0.01805 0.54% Castro::apply_source_to_state() 20 0.01055 0.01247 0.01378 0.41% FabArray::Saxpy() 20 0.01051 0.01242 0.01373 0.41% VisMF::Write(FabArray) 2 0.009233 0.009838 0.0132 0.39% Castro::check_for_nan() 20 0.01076 0.01162 0.01248 0.37% FabArray::setDomainBndry() 41 0.006923 0.01023 0.01246 0.37% MultiFab::contains_nan() 20 0.01073 0.01159 0.01245 0.37% Castro::Castro() 1 0.01005 0.01132 0.01233 0.37% Castro::construct_old_source() 50 0.007045 0.009519 0.01018 0.30% Castro::construct_old_gravity_source() 10 0.006995 0.009454 0.01011 0.30% Castro::computeNewDt() 9 0.00842 0.008429 0.008439 0.25% Castro::initMFs() 1 0.006619 0.007122 0.008246 0.25% AmrLevel::AmrLevel(dm) 1 0.005533 0.006023 0.006419 0.19% Other 260 0.01982 0.02483 0.02816 0.84% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 34 B 37 B 44 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8657 KiB 8667 KiB 8671 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6784 KiB 6787 KiB 6790 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7132 KiB 7139 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4576 KiB 4583 KiB 4599 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 203 KiB 217 KiB 230 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2813 KiB 2816 KiB 2817 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 228 KiB 235 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 35 KiB 40 KiB 54 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 77 KiB 78 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 67 KiB 70 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized