Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:17:46 UTC on 2025-09-19. Successfully read inputs file ... Castro git describe: 25.09.1-9-gb19db656e AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.09-5-g5b3bbfe7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014915147 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.354217484 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.372189286 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.372293688 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.363826123 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.325077039 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.300159481 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299735431 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.301343099 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.301505254 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300404841 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007595438 seconds Ending run at 05:17:50 UTC on 2025-09-19. Run time = 3.473424241 Run time without initialization = 3.303352895 Average number of zones advanced per microsecond: 0.794 Average number of zones advanced per microsecond per rank: 0.099 TinyProfiler total time across processes [min...avg...max]: 3.4692 ... 3.4721 ... 3.4735 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1947 2.2735 2.3448 67.50% Gravity::make_radial_gravity() 21 0.2978 0.3024 0.3141 9.04% check_for_negative_density() 10 0.043 0.1135 0.1952 5.62% Castro::initData() 1 0.03804 0.07456 0.1017 2.93% Castro::estTimeStep() 21 0.02752 0.05657 0.09141 2.63% amrex::Copy() 193 0.07912 0.08437 0.08846 2.55% FabArray::setVal() 143 0.06376 0.07176 0.07819 2.25% Castro::normalize_species() 62 0.05024 0.05863 0.0735 2.12% FabArray::ParallelCopy_finish() 41 0.04087 0.05187 0.05963 1.72% Castro::reset_internal_energy(Fab) 1008 0.04577 0.04798 0.04915 1.41% FabArray::ParallelCopy_nowait() 41 0.04014 0.04382 0.04526 1.30% FillPatchIterator::Initialize 41 0.03011 0.0344 0.03557 1.02% StateData::FillBoundary(geom) 41 0.02861 0.03289 0.03483 1.00% Castro::construct_new_gravity_source() 10 0.02364 0.02556 0.0281 0.81% Gravity::interpolate_monopole_grav() 21 0.02672 0.02718 0.02781 0.80% Castro::initialize_do_advance() 10 0.0184 0.01937 0.02131 0.61% Castro::computeTemp() 63 0.01861 0.01909 0.01944 0.56% FabArray::setDomainBndry() 41 0.007972 0.01189 0.01411 0.41% FabArray::Saxpy() 20 0.01251 0.01293 0.01378 0.40% Castro::initialize_advance() 10 0.01013 0.01169 0.01324 0.38% MultiFab::contains_nan() 20 0.01108 0.01168 0.01276 0.37% VisMF::Write(FabArray) 2 0.009289 0.009758 0.01223 0.35% Castro::construct_old_gravity_source() 10 0.009294 0.0101 0.011 0.32% Castro::initMFs() 1 0.006374 0.007671 0.01072 0.31% Amr::writePlotFile() 2 0.007414 0.009912 0.01041 0.30% StateData::define() 4 0.005138 0.006046 0.008153 0.23% Amr::coarseTimeStep() 10 0.002649 0.005188 0.006724 0.19% Castro::construct_new_source() 50 0.005727 0.00614 0.006369 0.18% Gravity::get_new_grav_vector() 11 0.00336 0.004314 0.005787 0.17% main() 1 0.003627 0.004277 0.004504 0.13% Gravity::get_old_grav_vector() 10 0.001605 0.002324 0.00277 0.08% AmrLevel::FillPatch() 41 0.001043 0.001258 0.001371 0.04% Castro::finalize_do_advance() 10 0.001178 0.001256 0.001304 0.04% Amr::timeStep() 10 0.0001418 0.0001982 0.0004324 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002878 0.000305 0.0003367 0.01% Castro::do_advance_ctu() 10 0.0001616 0.0001841 0.0002027 0.01% Castro::clean_state() 62 0.0001493 0.0001675 0.0001915 0.01% StateDataPhysBCFunct::() 41 0.0001058 0.0001206 0.0001346 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001002 0.000111 0.0001255 0.00% Castro::do_old_sources() 10 8.608e-05 9.897e-05 0.0001206 0.00% FabArray::ParallelCopy() 41 8.862e-05 0.0001019 0.000119 0.00% Amr::FinalizeInit() 1 3.403e-06 1.711e-05 0.0001004 0.00% Castro::construct_old_source() 50 6.41e-05 7.441e-05 9.041e-05 0.00% FillPatchSingleLevel 41 6.774e-05 7.441e-05 8.739e-05 0.00% Castro::Castro() 1 4.834e-05 6.945e-05 7.975e-05 0.00% Castro::do_new_sources() 10 5.836e-05 6.73e-05 7.462e-05 0.00% Amr::defBaseLevel() 1 4.625e-05 6.269e-05 7.261e-05 0.00% Castro::apply_source_to_state() 20 4.983e-05 5.559e-05 6.279e-05 0.00% Castro::advance() 10 4.183e-05 5.043e-05 6.207e-05 0.00% Castro::construct_old_gravity() 10 3.741e-05 4.379e-05 5.74e-05 0.00% Castro::subcycle_advance_ctu() 10 4.259e-05 5.215e-05 5.691e-05 0.00% Castro::construct_new_gravity() 10 3.628e-05 3.896e-05 4.415e-05 0.00% Castro::expand_state() 10 2.091e-05 2.746e-05 3.678e-05 0.00% Castro::check_for_nan() 20 2.533e-05 2.776e-05 3.111e-05 0.00% Castro::post_init() 1 1.507e-05 1.874e-05 2.688e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.004e-05 1.386e-05 2.31e-05 0.00% Castro::post_timestep() 10 1.535e-05 1.747e-05 2.16e-05 0.00% Castro::computeNewDt() 9 9.096e-06 1.065e-05 1.14e-05 0.00% Amr::InitializeInit() 1 2.857e-06 4.512e-06 8.632e-06 0.00% Castro::computeInitialDt() 2 2.552e-06 4.07e-06 8.013e-06 0.00% Amr::init() 1 1.906e-06 3.094e-06 6.071e-06 0.00% Amr::initialInit() 1 1.765e-06 2.108e-06 2.48e-06 0.00% Other 256 0.01104 0.01615 0.01898 0.55% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.469 3.472 3.473 100.00% Amr::coarseTimeStep() 10 3.291 3.291 3.291 94.76% Amr::timeStep() 10 3.275 3.276 3.279 94.39% Castro::advance() 10 3.257 3.258 3.259 93.81% Castro::subcycle_advance_ctu() 10 3.175 3.179 3.186 91.71% Castro::do_advance_ctu() 10 3.175 3.178 3.185 91.71% Castro::construct_ctu_hydro_source() 10 2.41 2.412 2.416 69.57% Gravity::make_radial_gravity() 21 0.3147 0.3198 0.3295 9.49% AmrLevel::FillPatch() 41 0.195 0.2105 0.223 6.42% Gravity::get_new_grav_vector() 11 0.217 0.2195 0.2227 6.41% Castro::construct_new_gravity() 10 0.1933 0.1957 0.1983 5.71% check_for_negative_density() 10 0.043 0.1135 0.1952 5.62% Castro::construct_old_gravity() 10 0.1812 0.1853 0.1948 5.61% Gravity::get_old_grav_vector() 10 0.1803 0.1846 0.1942 5.59% FillPatchIterator::Initialize 41 0.1657 0.1754 0.1868 5.38% Castro::initialize_do_advance() 10 0.1644 0.1778 0.1858 5.35% Amr::init() 1 0.1651 0.1685 0.1698 4.89% Amr::initialInit() 1 0.1501 0.1534 0.1547 4.45% Castro::clean_state() 62 0.1233 0.1314 0.1477 4.25% FillPatchIterator::FillFromLevel0() 41 0.1203 0.1291 0.1381 3.98% FillPatchSingleLevel 41 0.1202 0.129 0.138 3.97% Castro::expand_state() 10 0.1076 0.1206 0.1297 3.73% Amr::InitializeInit() 1 0.06245 0.09988 0.1265 3.64% Amr::defBaseLevel() 1 0.06245 0.09987 0.1265 3.64% Castro::initData() 1 0.04212 0.0789 0.1064 3.06% Castro::do_old_sources() 10 0.09573 0.09934 0.1046 3.01% FabArray::ParallelCopy() 41 0.08594 0.09591 0.1042 3.00% Amr::FinalizeInit() 1 0.0281 0.05351 0.09221 2.65% Castro::estTimeStep() 21 0.02752 0.05657 0.09141 2.63% amrex::Copy() 193 0.07912 0.08437 0.08846 2.55% Castro::initialize_advance() 10 0.06878 0.07571 0.07908 2.28% FabArray::setVal() 143 0.06376 0.07176 0.07819 2.25% Castro::do_new_sources() 10 0.06477 0.07055 0.0745 2.14% Castro::normalize_species() 62 0.05024 0.05863 0.0735 2.12% Castro::computeTemp() 63 0.06468 0.06737 0.06889 1.98% Castro::computeInitialDt() 2 0.002244 0.02761 0.06631 1.91% FabArray::ParallelCopy_finish() 41 0.04087 0.05187 0.05963 1.72% Castro::reset_internal_energy(MultiFab) 63 0.04607 0.04829 0.04945 1.42% Castro::reset_internal_energy(Fab) 1008 0.04577 0.04798 0.04915 1.41% FabArray::ParallelCopy_nowait() 41 0.04027 0.04393 0.04535 1.31% StateDataPhysBCFunct::() 41 0.02871 0.03301 0.03496 1.01% StateData::FillBoundary(geom) 41 0.02861 0.03289 0.03483 1.00% Castro::construct_new_source() 50 0.0299 0.0317 0.03382 0.97% Castro::construct_new_gravity_source() 10 0.02364 0.02556 0.0281 0.81% Gravity::interpolate_monopole_grav() 21 0.02672 0.02718 0.02781 0.80% Castro::finalize_do_advance() 10 0.01701 0.02139 0.02678 0.77% Castro::post_init() 1 0.02461 0.02497 0.02515 0.72% Amr::writePlotFile() 2 0.02272 0.02279 0.02288 0.66% Castro::post_timestep() 10 0.01701 0.01817 0.02104 0.61% Castro::Castro() 1 0.01001 0.01146 0.01489 0.43% FabArray::setDomainBndry() 41 0.007972 0.01189 0.01411 0.41% Castro::apply_source_to_state() 20 0.01257 0.01299 0.01385 0.40% FabArray::Saxpy() 20 0.01251 0.01293 0.01378 0.40% Castro::check_for_nan() 20 0.01111 0.01171 0.01278 0.37% MultiFab::contains_nan() 20 0.01108 0.01168 0.01276 0.37% VisMF::Write(FabArray) 2 0.009289 0.009758 0.01223 0.35% Castro::construct_old_source() 50 0.009361 0.01018 0.01109 0.32% Castro::construct_old_gravity_source() 10 0.009294 0.0101 0.011 0.32% Castro::initMFs() 1 0.006374 0.007671 0.01072 0.31% Castro::computeNewDt() 9 0.008824 0.008845 0.008872 0.26% AmrLevel::AmrLevel(dm) 1 0.005148 0.00606 0.008175 0.24% StateData::define() 4 0.005138 0.006046 0.008153 0.23% Other 256 0.01606 0.02515 0.03048 0.88% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 28 B 37 B 49 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8649 KiB 8662 KiB 8665 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6785 KiB 6787 KiB 6794 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7131 KiB 7134 KiB 7140 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4567 KiB 4573 KiB 4583 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 210 KiB 230 KiB 245 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2813 KiB 2814 KiB 2816 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 231 KiB 234 KiB 241 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 38 KiB 43 KiB 47 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2025 KiB 2027 KiB 2028 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 80 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 66 KiB 68 KiB 71 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized