Initializing AMReX (25.06-22-g1d307c2c661a-dirty)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.06-22-g1d307c2c661a-dirty) initialized Starting run at 05:34:19 UTC on 2025-09-22. Successfully read inputs file ... Castro git describe: 25.09.1-10-g86773e12f AMReX git describe: 25.06-22-g1d307c2c6-dirty Microphysics git describe: 25.09-5-g5b3bbfe7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014740584 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.331639816 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.340240999 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.315605733 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.348777546 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.359904991 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.303308385 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299820142 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.298743554 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.300994955 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300904591 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00765489 seconds Ending run at 05:34:22 UTC on 2025-09-22. Run time = 3.484715295 Run time without initialization = 3.212734749 Average number of zones advanced per microsecond: 0.816 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.4796 ... 3.4835 ... 3.4847 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1897 2.2146 2.2639 64.97% Gravity::make_radial_gravity() 21 0.2941 0.3085 0.3244 9.31% FabArray::ParallelCopy_finish() 41 0.06073 0.07988 0.1328 3.81% check_for_negative_density() 10 0.04514 0.09429 0.1206 3.46% DistributionMapping::LeastUsedCPUs() 1 4.022e-05 0.0927 0.107 3.07% Amr::InitAmr() 1 0.0001921 0.01342 0.106 3.04% Castro::initData() 1 0.03725 0.07057 0.1029 2.95% Castro::estTimeStep() 21 0.04444 0.06944 0.093 2.67% amrex::Copy() 193 0.05507 0.07418 0.08386 2.41% FabArray::setVal() 143 0.04209 0.06514 0.08132 2.33% Castro::reset_internal_energy(Fab) 1008 0.04226 0.04592 0.04844 1.39% Castro::normalize_species() 62 0.04505 0.04601 0.04811 1.38% FabArray::ParallelCopy_nowait() 41 0.03175 0.0391 0.04091 1.17% FillPatchIterator::Initialize 41 0.02783 0.03167 0.03458 0.99% StateData::FillBoundary(geom) 41 0.02894 0.03114 0.03387 0.97% Gravity::interpolate_monopole_grav() 21 0.02645 0.02772 0.03273 0.94% Castro::construct_new_gravity_source() 10 0.02035 0.02417 0.02829 0.81% Castro::initialize_do_advance() 10 0.01287 0.01718 0.02124 0.61% Castro::computeTemp() 63 0.01669 0.01822 0.01931 0.55% Castro::initialize_advance() 10 0.00544 0.01013 0.01299 0.37% MultiFab::contains_nan() 20 0.01012 0.0112 0.01276 0.37% Amr::writePlotFile() 2 0.007479 0.01043 0.01274 0.37% FabArray::Saxpy() 20 0.007551 0.01105 0.01253 0.36% VisMF::Write(FabArray) 2 0.009053 0.00986 0.01247 0.36% FabArray::setDomainBndry() 41 0.007745 0.01004 0.01237 0.35% Castro::construct_old_gravity_source() 10 0.005219 0.00843 0.009174 0.26% Amr::coarseTimeStep() 10 0.001835 0.00499 0.008533 0.24% Castro::initMFs() 1 0.006145 0.006719 0.007752 0.22% Castro::construct_new_source() 50 0.004693 0.005479 0.005754 0.17% Gravity::get_new_grav_vector() 11 0.002799 0.00377 0.005724 0.16% main() 1 0.003717 0.004206 0.004572 0.13% Gravity::get_old_grav_vector() 10 0.00164 0.0019 0.002167 0.06% Castro::finalize_do_advance() 10 0.0006254 0.001119 0.001478 0.04% AmrLevel::FillPatch() 41 0.000763 0.0009611 0.001206 0.03% Amr::timeStep() 10 0.0001308 0.0001755 0.0003906 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002674 0.0002792 0.0003009 0.01% Castro::do_advance_ctu() 10 0.0001424 0.0001664 0.0001971 0.01% Castro::clean_state() 62 0.0001394 0.0001626 0.0001947 0.01% FillPatchIterator::FillFromLevel0() 41 9.746e-05 0.0001105 0.0001297 0.00% StateDataPhysBCFunct::() 41 9.05e-05 0.0001125 0.0001282 0.00% Castro::do_old_sources() 10 7.416e-05 8.487e-05 0.0001006 0.00% FabArray::ParallelCopy() 41 8.196e-05 8.651e-05 9.14e-05 0.00% Castro::construct_old_source() 50 4.703e-05 6.296e-05 8.11e-05 0.00% Castro::Castro() 1 5.413e-05 6.704e-05 7.944e-05 0.00% Amr::defBaseLevel() 1 4.981e-05 6.092e-05 7.886e-05 0.00% FillPatchSingleLevel 41 6.024e-05 6.607e-05 7.722e-05 0.00% Amr::FinalizeInit() 1 3.252e-06 1.398e-05 7.518e-05 0.00% Castro::apply_source_to_state() 20 4.242e-05 5.099e-05 6.552e-05 0.00% Castro::do_new_sources() 10 4.761e-05 5.373e-05 6.026e-05 0.00% Castro::subcycle_advance_ctu() 10 3.599e-05 4.426e-05 5.42e-05 0.00% Castro::advance() 10 3.707e-05 4.394e-05 4.858e-05 0.00% Castro::construct_new_gravity() 10 2.902e-05 3.749e-05 4.832e-05 0.00% Castro::construct_old_gravity() 10 3.371e-05 3.736e-05 4.274e-05 0.00% Castro::check_for_nan() 20 2.267e-05 2.47e-05 2.787e-05 0.00% Castro::post_timestep() 10 1.415e-05 1.808e-05 2.635e-05 0.00% Castro::expand_state() 10 1.84e-05 2.054e-05 2.313e-05 0.00% Castro::post_init() 1 1.542e-05 1.738e-05 1.924e-05 0.00% Castro::computeNewDt() 9 8.67e-06 9.792e-06 1.062e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.236e-06 6.094e-06 9.05e-06 0.00% Amr::init() 1 1.84e-06 3.291e-06 8.184e-06 0.00% Amr::InitializeInit() 1 3.045e-06 3.964e-06 7.892e-06 0.00% Castro::computeInitialDt() 2 2.63e-06 3.576e-06 4.674e-06 0.00% Amr::initialInit() 1 1.256e-06 1.957e-06 3.04e-06 0.00% Other 258 0.01528 0.0175 0.01911 0.55% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.48 3.483 3.485 100.00% Amr::coarseTimeStep() 10 3.201 3.201 3.201 91.85% Amr::timeStep() 10 3.182 3.186 3.189 91.52% Castro::advance() 10 3.167 3.17 3.172 91.04% Castro::subcycle_advance_ctu() 10 3.085 3.1 3.116 89.43% Castro::do_advance_ctu() 10 3.085 3.1 3.116 89.43% Castro::construct_ctu_hydro_source() 10 2.327 2.331 2.334 66.98% Gravity::make_radial_gravity() 21 0.3091 0.3239 0.3381 9.70% Amr::init() 1 0.1649 0.2575 0.2718 7.80% Amr::initialInit() 1 0.1499 0.2424 0.2568 7.37% AmrLevel::FillPatch() 41 0.1941 0.2223 0.2557 7.34% FillPatchIterator::Initialize 41 0.1667 0.1923 0.2327 6.68% Amr::InitializeInit() 1 0.0685 0.1831 0.2305 6.61% Amr::defBaseLevel() 1 0.06849 0.1831 0.2305 6.61% Gravity::get_new_grav_vector() 11 0.2147 0.2199 0.2222 6.38% Castro::construct_old_gravity() 10 0.1874 0.1933 0.2037 5.85% Gravity::get_old_grav_vector() 10 0.1868 0.1926 0.2031 5.83% Castro::construct_new_gravity() 10 0.1928 0.1975 0.1992 5.72% FillPatchIterator::FillFromLevel0() 41 0.129 0.1506 0.1959 5.62% FillPatchSingleLevel 41 0.1289 0.1505 0.1958 5.62% Castro::initialize_do_advance() 10 0.1662 0.1751 0.184 5.28% FabArray::ParallelCopy() 41 0.09975 0.1192 0.1648 4.73% Castro::expand_state() 10 0.1093 0.1214 0.137 3.93% FabArray::ParallelCopy_finish() 41 0.06073 0.07988 0.1328 3.81% Castro::clean_state() 62 0.11 0.1158 0.122 3.50% check_for_negative_density() 10 0.04514 0.09429 0.1206 3.46% DistributionMapping::SFCProcessorMapDoIt() 1 4.618e-05 0.09271 0.107 3.07% DistributionMapping::LeastUsedCPUs() 1 4.022e-05 0.0927 0.107 3.07% Castro::initData() 1 0.04107 0.07437 0.1068 3.07% Amr::InitAmr() 1 0.0001956 0.01343 0.106 3.04% Castro::do_old_sources() 10 0.08453 0.0975 0.1024 2.94% Castro::estTimeStep() 21 0.04444 0.06944 0.093 2.67% Amr::FinalizeInit() 1 0.02625 0.05932 0.09239 2.65% amrex::Copy() 193 0.05507 0.07418 0.08386 2.41% FabArray::setVal() 143 0.04209 0.06514 0.08132 2.33% Castro::initialize_advance() 10 0.04777 0.06722 0.07977 2.29% Castro::do_new_sources() 10 0.05247 0.0628 0.07372 2.12% Castro::computeInitialDt() 2 0.00211 0.03526 0.06819 1.96% Castro::computeTemp() 63 0.05921 0.06441 0.06804 1.95% Castro::reset_internal_energy(MultiFab) 63 0.04252 0.0462 0.04872 1.40% Castro::reset_internal_energy(Fab) 1008 0.04226 0.04592 0.04844 1.39% Castro::normalize_species() 62 0.04505 0.04601 0.04811 1.38% FabArray::ParallelCopy_nowait() 41 0.03187 0.03921 0.04099 1.18% Castro::finalize_do_advance() 10 0.01301 0.02681 0.03506 1.01% StateDataPhysBCFunct::() 41 0.02906 0.03125 0.034 0.98% Castro::construct_new_source() 50 0.02504 0.02965 0.03391 0.97% StateData::FillBoundary(geom) 41 0.02894 0.03114 0.03387 0.97% Gravity::interpolate_monopole_grav() 21 0.02645 0.02772 0.03273 0.94% Castro::construct_new_gravity_source() 10 0.02035 0.02417 0.02829 0.81% Castro::post_init() 1 0.02316 0.02354 0.0237 0.68% Amr::writePlotFile() 2 0.02265 0.0228 0.02335 0.67% Castro::post_timestep() 10 0.01536 0.01582 0.01666 0.48% Castro::check_for_nan() 20 0.01014 0.01123 0.01279 0.37% MultiFab::contains_nan() 20 0.01012 0.0112 0.01276 0.37% Castro::apply_source_to_state() 20 0.007593 0.01111 0.01259 0.36% FabArray::Saxpy() 20 0.007551 0.01105 0.01253 0.36% VisMF::Write(FabArray) 2 0.009053 0.00986 0.01247 0.36% FabArray::setDomainBndry() 41 0.007745 0.01004 0.01237 0.35% Castro::Castro() 1 0.008626 0.01043 0.01142 0.33% Castro::construct_old_source() 50 0.005266 0.008493 0.00924 0.27% Castro::construct_old_gravity_source() 10 0.005219 0.00843 0.009174 0.26% Castro::computeNewDt() 9 0.008491 0.008507 0.008528 0.24% Castro::initMFs() 1 0.006145 0.006719 0.007752 0.22% Other 258 0.02434 0.02784 0.03103 0.89% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 28 B 36 B 60 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8397 KiB 8408 KiB 8420 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6575 KiB 6581 KiB 6589 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 6917 KiB 6924 KiB 6934 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4425 KiB 4445 KiB 4469 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 214 KiB 237 KiB 274 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2725 KiB 2729 KiB 2732 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 226 KiB 237 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 41 KiB 51 KiB 71 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 1965 KiB 1968 KiB 1971 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 79 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 68 KiB 71 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.06-22-g1d307c2c661a-dirty) finalized