Initializing AMReX (25.10-8-g2ee8ae270dd5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.10-8-g2ee8ae270dd5) initialized Starting run at 05:17:34 UTC on 2025-10-03. Successfully read inputs file ... Castro git describe: 25.10-1-g0b546a55c AMReX git describe: 25.10-8-g2ee8ae270 Microphysics git describe: 25.10 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014414506 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.353602812 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.318824049 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.332137951 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.315335942 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.359231537 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.309349753 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299602269 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.303456766 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.313765821 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.29940078 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007583271 seconds Ending run at 05:17:38 UTC on 2025-10-03. Run time = 3.385891903 Run time without initialization = 3.217461435 Average number of zones advanced per microsecond: 0.815 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3842 ... 3.3850 ... 3.3859 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1766 2.2370 2.2939 67.75% Gravity::make_radial_gravity() 21 0.2951 0.2997 0.312 9.22% check_for_negative_density() 10 0.06665 0.1167 0.1751 5.17% Castro::initData() 1 0.04494 0.07254 0.102 3.01% amrex::Copy() 193 0.06471 0.0793 0.08956 2.64% Castro::estTimeStep() 21 0.02241 0.05741 0.08657 2.56% FabArray::ParallelCopy_finish() 41 0.04199 0.05305 0.08533 2.52% FabArray::setVal() 143 0.05471 0.06584 0.07137 2.11% Castro::normalize_species() 62 0.04434 0.04681 0.05517 1.63% Castro::reset_internal_energy(Fab) 1008 0.04195 0.0451 0.0482 1.42% FabArray::ParallelCopy_nowait() 41 0.03483 0.04087 0.04292 1.27% FillPatchIterator::Initialize 41 0.02703 0.03204 0.03468 1.02% StateData::FillBoundary(geom) 41 0.02903 0.03101 0.03281 0.97% Gravity::interpolate_monopole_grav() 21 0.02651 0.02688 0.02726 0.80% Castro::construct_new_gravity_source() 10 0.02297 0.02487 0.02718 0.80% Castro::computeTemp() 63 0.01704 0.01794 0.01872 0.55% Castro::initialize_do_advance() 10 0.01147 0.01648 0.01802 0.53% Castro::initialize_advance() 10 0.005325 0.01073 0.01373 0.41% FabArray::Saxpy() 20 0.01041 0.0125 0.01344 0.40% Amr::writePlotFile() 2 0.007424 0.01031 0.01272 0.38% MultiFab::contains_nan() 20 0.01057 0.0115 0.01268 0.37% VisMF::Write(FabArray) 2 0.008493 0.009618 0.01211 0.36% FabArray::setDomainBndry() 41 0.006419 0.009317 0.0118 0.35% Castro::construct_old_gravity_source() 10 0.006152 0.00923 0.009848 0.29% Castro::initMFs() 1 0.00661 0.007108 0.008468 0.25% Castro::construct_new_source() 50 0.005601 0.006049 0.006455 0.19% main() 1 0.003795 0.004158 0.004635 0.14% Gravity::get_new_grav_vector() 11 0.002723 0.003458 0.003988 0.12% Amr::coarseTimeStep() 10 0.001784 0.002603 0.003404 0.10% Gravity::get_old_grav_vector() 10 0.001815 0.002067 0.00235 0.07% Castro::finalize_do_advance() 10 0.0005382 0.001142 0.00146 0.04% AmrLevel::FillPatch() 41 0.0007077 0.0009913 0.001256 0.04% Amr::timeStep() 10 0.0001322 0.0001876 0.0004538 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002655 0.00029 0.0003862 0.01% Castro::do_advance_ctu() 10 0.0001583 0.0001807 0.0002415 0.01% Castro::clean_state() 62 0.0001388 0.0001506 0.0001699 0.01% StateDataPhysBCFunct::() 41 0.0001138 0.0001308 0.0001624 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001023 0.0001117 0.0001379 0.00% FabArray::ParallelCopy() 41 7.807e-05 9.754e-05 0.0001146 0.00% Castro::do_old_sources() 10 7.027e-05 8.523e-05 9.585e-05 0.00% Castro::Castro() 1 4.735e-05 7.758e-05 9.038e-05 0.00% FillPatchSingleLevel 41 6.514e-05 7.379e-05 8.37e-05 0.00% Castro::construct_old_source() 50 4.44e-05 6.809e-05 8.104e-05 0.00% Amr::FinalizeInit() 1 2.663e-06 1.205e-05 6.726e-05 0.00% Castro::do_new_sources() 10 4.622e-05 5.508e-05 6.17e-05 0.00% Castro::advance() 10 3.938e-05 4.727e-05 5.707e-05 0.00% Castro::subcycle_advance_ctu() 10 4.353e-05 4.912e-05 5.422e-05 0.00% Castro::apply_source_to_state() 20 4.024e-05 4.815e-05 5.262e-05 0.00% Castro::construct_old_gravity() 10 3.652e-05 4.332e-05 5.134e-05 0.00% Castro::construct_new_gravity() 10 3.047e-05 3.691e-05 4.548e-05 0.00% Amr::defBaseLevel() 1 3.069e-05 3.468e-05 4.044e-05 0.00% Castro::expand_state() 10 2.025e-05 2.49e-05 2.917e-05 0.00% Castro::check_for_nan() 20 2.264e-05 2.537e-05 2.777e-05 0.00% Castro::post_timestep() 10 1.454e-05 1.734e-05 2.182e-05 0.00% Castro::post_init() 1 1.449e-05 1.666e-05 2.156e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.036e-05 1.152e-05 1.296e-05 0.00% Castro::computeNewDt() 9 8.745e-06 9.899e-06 1.152e-05 0.00% Amr::InitializeInit() 1 2.839e-06 4.078e-06 9.636e-06 0.00% Castro::computeInitialDt() 2 2.924e-06 3.776e-06 4.631e-06 0.00% Amr::initialInit() 1 1.681e-06 1.997e-06 2.567e-06 0.00% Amr::init() 1 1.71e-06 2.071e-06 2.449e-06 0.00% Other 260 0.01598 0.01869 0.02097 0.62% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.384 3.385 3.386 100.00% Amr::coarseTimeStep() 10 3.205 3.205 3.205 94.67% Amr::timeStep() 10 3.192 3.193 3.194 94.33% Castro::advance() 10 3.176 3.177 3.177 93.84% Castro::subcycle_advance_ctu() 10 3.101 3.105 3.118 92.09% Castro::do_advance_ctu() 10 3.101 3.105 3.118 92.09% Castro::construct_ctu_hydro_source() 10 2.36 2.375 2.384 70.40% Gravity::make_radial_gravity() 21 0.3124 0.3159 0.3245 9.58% Gravity::get_new_grav_vector() 11 0.2108 0.2126 0.2141 6.32% AmrLevel::FillPatch() 41 0.1806 0.1998 0.211 6.23% Castro::construct_old_gravity() 10 0.1806 0.1844 0.1933 5.71% Gravity::get_old_grav_vector() 10 0.1799 0.1838 0.1927 5.69% Castro::construct_new_gravity() 10 0.1861 0.1873 0.1882 5.56% FillPatchIterator::Initialize 41 0.1502 0.1668 0.1847 5.46% check_for_negative_density() 10 0.06665 0.1167 0.1751 5.17% Amr::init() 1 0.1668 0.1676 0.1681 4.96% Castro::initialize_do_advance() 10 0.1567 0.1623 0.1671 4.93% Amr::initialInit() 1 0.1517 0.1527 0.1533 4.53% FillPatchIterator::FillFromLevel0() 41 0.1137 0.1254 0.1513 4.47% FillPatchSingleLevel 41 0.1135 0.1253 0.1512 4.46% Amr::InitializeInit() 1 0.06725 0.09415 0.124 3.66% Amr::defBaseLevel() 1 0.06725 0.09415 0.124 3.66% Castro::expand_state() 10 0.1018 0.1092 0.1214 3.58% FabArray::ParallelCopy() 41 0.08376 0.09412 0.1203 3.55% Castro::clean_state() 62 0.1102 0.1155 0.1196 3.53% Castro::do_old_sources() 10 0.08941 0.09778 0.1097 3.24% Castro::initData() 1 0.04892 0.07643 0.106 3.13% amrex::Copy() 193 0.06471 0.0793 0.08956 2.64% Castro::estTimeStep() 21 0.02241 0.05741 0.08657 2.56% FabArray::ParallelCopy_finish() 41 0.04199 0.05305 0.08533 2.52% Amr::FinalizeInit() 1 0.02929 0.05856 0.0844 2.49% Castro::initialize_advance() 10 0.0549 0.06835 0.07332 2.17% FabArray::setVal() 143 0.05471 0.06584 0.07137 2.11% Castro::do_new_sources() 10 0.06046 0.06405 0.07035 2.08% Castro::computeTemp() 63 0.05927 0.06334 0.06724 1.99% Castro::computeInitialDt() 2 0.002131 0.03148 0.05784 1.71% Castro::normalize_species() 62 0.04434 0.04681 0.05517 1.63% Castro::reset_internal_energy(MultiFab) 63 0.04224 0.04539 0.04859 1.43% Castro::reset_internal_energy(Fab) 1008 0.04195 0.0451 0.0482 1.42% FabArray::ParallelCopy_nowait() 41 0.03495 0.04097 0.04301 1.27% Castro::construct_new_source() 50 0.02884 0.03092 0.03364 0.99% StateDataPhysBCFunct::() 41 0.02915 0.03114 0.03293 0.97% StateData::FillBoundary(geom) 41 0.02903 0.03101 0.03281 0.97% Gravity::interpolate_monopole_grav() 21 0.02651 0.02688 0.02726 0.80% Castro::construct_new_gravity_source() 10 0.02297 0.02487 0.02718 0.80% Castro::post_init() 1 0.02607 0.02657 0.02689 0.79% Amr::writePlotFile() 2 0.02225 0.02256 0.02306 0.68% Castro::finalize_do_advance() 10 0.01219 0.01852 0.02262 0.67% Castro::post_timestep() 10 0.01514 0.01584 0.0168 0.50% Castro::apply_source_to_state() 20 0.01045 0.01254 0.01349 0.40% FabArray::Saxpy() 20 0.01041 0.0125 0.01344 0.40% Castro::check_for_nan() 20 0.01059 0.01152 0.0127 0.38% MultiFab::contains_nan() 20 0.01057 0.0115 0.01268 0.37% VisMF::Write(FabArray) 2 0.008493 0.009618 0.01211 0.36% Castro::Castro() 1 0.01062 0.01109 0.01189 0.35% FabArray::setDomainBndry() 41 0.006419 0.009317 0.0118 0.35% Castro::construct_old_source() 50 0.006196 0.009298 0.009929 0.29% Castro::construct_old_gravity_source() 10 0.006152 0.00923 0.009848 0.29% Castro::computeNewDt() 9 0.008563 0.008575 0.008584 0.25% Castro::initMFs() 1 0.00661 0.007108 0.008468 0.25% AmrLevel::AmrLevel(dm) 1 0.005467 0.005753 0.006414 0.19% Other 260 0.02057 0.02435 0.02771 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 33 B 36 B 42 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8659 KiB 8669 KiB 8672 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6777 KiB 6782 KiB 6787 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7140 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4576 KiB 4583 KiB 4604 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 201 KiB 221 KiB 237 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2812 KiB 2815 KiB 2815 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 234 KiB 237 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 38 KiB 42 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 68 KiB 69 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.10-8-g2ee8ae270dd5) finalized