Initializing AMReX (25.10-9-gba0576014f7f)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.10-9-gba0576014f7f) initialized Starting run at 05:17:59 UTC on 2025-10-06. Successfully read inputs file ... Castro git describe: 25.10-1-g0b546a55c AMReX git describe: 25.10-9-gba0576014 Microphysics git describe: 25.10 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014651589 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.337230537 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.3325841 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.320473988 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320035306 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.369651221 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.310952173 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.295789266 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.297288848 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.29686071 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.298074267 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.0075151 seconds Ending run at 05:18:02 UTC on 2025-10-06. Run time = 3.358823898 Run time without initialization = 3.191900831 Average number of zones advanced per microsecond: 0.821 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3571 ... 3.3581 ... 3.3588 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1980 2.2432 2.3183 69.02% Gravity::make_radial_gravity() 21 0.2815 0.2911 0.3077 9.16% check_for_negative_density() 10 0.01053 0.09119 0.1438 4.28% Castro::initData() 1 0.03733 0.07202 0.1033 3.08% Castro::estTimeStep() 21 0.02186 0.05916 0.0972 2.89% amrex::Copy() 193 0.06212 0.07995 0.08972 2.67% FabArray::ParallelCopy_finish() 41 0.03838 0.05073 0.08972 2.67% FabArray::setVal() 143 0.05464 0.06615 0.07275 2.17% Castro::reset_internal_energy(Fab) 1008 0.04299 0.04579 0.04684 1.39% Castro::normalize_species() 62 0.04412 0.04508 0.04656 1.39% FabArray::ParallelCopy_nowait() 41 0.0353 0.04174 0.04354 1.30% FillPatchIterator::Initialize 41 0.0267 0.03322 0.03563 1.06% StateData::FillBoundary(geom) 41 0.02834 0.03157 0.0353 1.05% Castro::construct_new_gravity_source() 10 0.02336 0.02479 0.02695 0.80% Gravity::interpolate_monopole_grav() 21 0.0263 0.02659 0.02689 0.80% Castro::computeTemp() 63 0.01714 0.0181 0.01857 0.55% Castro::initialize_do_advance() 10 0.01171 0.01686 0.01837 0.55% Castro::initialize_advance() 10 0.005363 0.01061 0.0138 0.41% FabArray::Saxpy() 20 0.01062 0.01243 0.01361 0.41% MultiFab::contains_nan() 20 0.01056 0.01133 0.01256 0.37% Amr::writePlotFile() 2 0.007581 0.01028 0.01253 0.37% VisMF::Write(FabArray) 2 0.008467 0.009589 0.01213 0.36% FabArray::setDomainBndry() 41 0.006909 0.009913 0.01207 0.36% Castro::construct_old_gravity_source() 10 0.007037 0.00941 0.009845 0.29% Castro::initMFs() 1 0.006545 0.007135 0.008646 0.26% Castro::construct_new_source() 50 0.00563 0.005927 0.006172 0.18% main() 1 0.003948 0.004235 0.004638 0.14% Gravity::get_new_grav_vector() 11 0.002791 0.003609 0.004016 0.12% Gravity::get_old_grav_vector() 10 0.001555 0.002106 0.002738 0.08% Amr::coarseTimeStep() 10 0.001078 0.001918 0.002687 0.08% Castro::finalize_do_advance() 10 0.0005 0.001095 0.00123 0.04% AmrLevel::FillPatch() 41 0.000702 0.0009184 0.001115 0.03% Amr::timeStep() 10 0.0001398 0.0001847 0.0004079 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002652 0.0002805 0.0003152 0.01% Castro::do_advance_ctu() 10 0.0001506 0.0001704 0.0001863 0.01% Castro::clean_state() 62 0.0001398 0.0001553 0.0001724 0.01% StateDataPhysBCFunct::() 41 0.0001084 0.0001259 0.0001504 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001011 0.0001106 0.00012 0.00% Castro::do_old_sources() 10 7.474e-05 8.627e-05 0.0001014 0.00% FabArray::ParallelCopy() 41 9.021e-05 9.506e-05 0.0001004 0.00% Castro::Castro() 1 5.118e-05 7.442e-05 9.464e-05 0.00% FillPatchSingleLevel 41 6.838e-05 7.576e-05 8.771e-05 0.00% Amr::FinalizeInit() 1 3.533e-06 1.486e-05 8.425e-05 0.00% Castro::construct_old_source() 50 5.523e-05 6.539e-05 7.444e-05 0.00% Castro::do_new_sources() 10 4.643e-05 5.488e-05 6.324e-05 0.00% Castro::subcycle_advance_ctu() 10 4.115e-05 4.98e-05 5.976e-05 0.00% Castro::construct_old_gravity() 10 3.549e-05 4.13e-05 5.756e-05 0.00% Castro::advance() 10 3.905e-05 4.634e-05 5.602e-05 0.00% Castro::apply_source_to_state() 20 4.141e-05 4.954e-05 5.565e-05 0.00% Amr::defBaseLevel() 1 3.474e-05 4.314e-05 4.952e-05 0.00% Castro::construct_new_gravity() 10 3.158e-05 3.59e-05 4.122e-05 0.00% Castro::expand_state() 10 2.303e-05 2.768e-05 3.525e-05 0.00% Castro::check_for_nan() 20 2.407e-05 2.556e-05 2.7e-05 0.00% Castro::post_timestep() 10 1.609e-05 1.816e-05 2.115e-05 0.00% Castro::post_init() 1 1.276e-05 1.55e-05 1.766e-05 0.00% Castro::computeNewDt() 9 8.97e-06 9.648e-06 1.061e-05 0.00% Amr::InitializeInit() 1 2.798e-06 4.402e-06 8.44e-06 0.00% Castro::computeInitialDt() 2 3.114e-06 3.618e-06 4.138e-06 0.00% Amr::init() 1 1.871e-06 2.196e-06 2.744e-06 0.00% Amr::initialInit() 1 1.399e-06 1.984e-06 2.449e-06 0.00% Other 261 0.01602 0.01855 0.02075 0.62% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.357 3.358 3.359 100.00% Amr::coarseTimeStep() 10 3.18 3.18 3.18 94.67% Amr::timeStep() 10 3.168 3.168 3.169 94.35% Castro::advance() 10 3.152 3.153 3.153 93.87% Castro::subcycle_advance_ctu() 10 3.077 3.081 3.095 92.14% Castro::do_advance_ctu() 10 3.077 3.081 3.095 92.14% Castro::construct_ctu_hydro_source() 10 2.35 2.355 2.363 70.35% Gravity::make_radial_gravity() 21 0.298 0.3075 0.3205 9.54% AmrLevel::FillPatch() 41 0.1848 0.2006 0.2112 6.29% Gravity::get_new_grav_vector() 11 0.2049 0.2064 0.2075 6.18% Castro::construct_old_gravity() 10 0.1769 0.183 0.1934 5.76% Gravity::get_old_grav_vector() 10 0.176 0.1823 0.1927 5.74% FillPatchIterator::Initialize 41 0.1558 0.1677 0.1875 5.58% Castro::construct_new_gravity() 10 0.1828 0.1838 0.1844 5.49% Castro::initialize_do_advance() 10 0.1568 0.1659 0.1687 5.02% Amr::init() 1 0.1655 0.1662 0.1666 4.96% FillPatchIterator::FillFromLevel0() 41 0.1159 0.1246 0.1539 4.58% FillPatchSingleLevel 41 0.1158 0.1244 0.1538 4.58% Amr::initialInit() 1 0.1501 0.1513 0.1518 4.52% check_for_negative_density() 10 0.01053 0.09119 0.1438 4.28% FabArray::ParallelCopy() 41 0.0818 0.09267 0.1252 3.73% Amr::InitializeInit() 1 0.05893 0.09348 0.1245 3.71% Amr::defBaseLevel() 1 0.05893 0.09348 0.1245 3.71% Castro::expand_state() 10 0.1027 0.1124 0.122 3.63% Castro::clean_state() 62 0.1104 0.1145 0.1177 3.51% Castro::initData() 1 0.04115 0.07588 0.1071 3.19% Castro::estTimeStep() 21 0.02186 0.05916 0.0972 2.89% Castro::do_old_sources() 10 0.09088 0.09478 0.09715 2.89% Amr::FinalizeInit() 1 0.02661 0.05786 0.09282 2.76% amrex::Copy() 193 0.06212 0.07995 0.08972 2.67% FabArray::ParallelCopy_finish() 41 0.03838 0.05073 0.08972 2.67% FabArray::setVal() 143 0.05464 0.06615 0.07275 2.17% Castro::initialize_advance() 10 0.05365 0.0679 0.0727 2.16% Castro::do_new_sources() 10 0.0605 0.06404 0.07027 2.09% Castro::computeInitialDt() 2 0.002136 0.03346 0.06839 2.04% Castro::computeTemp() 63 0.0604 0.06417 0.06554 1.95% Castro::reset_internal_energy(MultiFab) 63 0.04326 0.04607 0.04713 1.40% Castro::reset_internal_energy(Fab) 1008 0.04299 0.04579 0.04684 1.39% Castro::normalize_species() 62 0.04412 0.04508 0.04656 1.39% FabArray::ParallelCopy_nowait() 41 0.03542 0.04185 0.04363 1.30% StateDataPhysBCFunct::() 41 0.02847 0.0317 0.03545 1.06% StateData::FillBoundary(geom) 41 0.02834 0.03157 0.0353 1.05% Castro::construct_new_source() 50 0.02922 0.03071 0.03312 0.99% Castro::construct_new_gravity_source() 10 0.02336 0.02479 0.02695 0.80% Gravity::interpolate_monopole_grav() 21 0.0263 0.02659 0.02689 0.80% Castro::post_init() 1 0.02344 0.02388 0.02405 0.72% Amr::writePlotFile() 2 0.02238 0.02248 0.02294 0.68% Castro::finalize_do_advance() 10 0.01142 0.01837 0.02272 0.68% Castro::post_timestep() 10 0.0149 0.01563 0.016 0.48% Castro::apply_source_to_state() 20 0.01067 0.01248 0.01366 0.41% FabArray::Saxpy() 20 0.01062 0.01243 0.01361 0.41% Castro::check_for_nan() 20 0.01058 0.01136 0.01259 0.37% MultiFab::contains_nan() 20 0.01056 0.01133 0.01256 0.37% VisMF::Write(FabArray) 2 0.008467 0.009589 0.01213 0.36% FabArray::setDomainBndry() 41 0.006909 0.009913 0.01207 0.36% Castro::Castro() 1 0.01053 0.01105 0.01194 0.36% Castro::construct_old_source() 50 0.007092 0.009476 0.00992 0.30% Castro::construct_old_gravity_source() 10 0.007037 0.00941 0.009845 0.29% Castro::initMFs() 1 0.006545 0.007135 0.008646 0.26% Castro::computeNewDt() 9 0.008425 0.00844 0.008461 0.25% Other 261 0.02621 0.02995 0.0334 0.99% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 34 B 42 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8660 KiB 8669 KiB 8671 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6775 KiB 6782 KiB 6787 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7131 KiB 7139 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4574 KiB 4583 KiB 4607 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 206 KiB 225 KiB 241 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2812 KiB 2815 KiB 2817 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 226 KiB 233 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 38 KiB 42 KiB 59 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 78 KiB 78 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 67 KiB 69 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.10-9-gba0576014f7f) finalized