Initializing AMReX (25.10-11-g26054b26bb65)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.10-11-g26054b26bb65) initialized Starting run at 13:59:35 UTC on 2025-10-07. Successfully read inputs file ... Castro git describe: 25.10-2-gd35bcf789 AMReX git describe: 25.10-11-g26054b26b Microphysics git describe: 25.10 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014487784 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.344964541 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.341759138 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316748828 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.317489659 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.358934909 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.305738729 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298982295 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.298760663 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.299217838 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.2990744 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007547926 seconds Ending run at 13:59:38 UTC on 2025-10-07. Run time = 3.358784176 Run time without initialization = 3.194281162 Average number of zones advanced per microsecond: 0.821 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3570 ... 3.3581 ... 3.3588 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1903 2.2383 2.3002 68.48% Gravity::make_radial_gravity() 21 0.2906 0.2982 0.3116 9.28% check_for_negative_density() 10 0.02961 0.09534 0.1455 4.33% Castro::initData() 1 0.03751 0.07273 0.1013 3.02% Castro::estTimeStep() 21 0.03146 0.05689 0.09533 2.84% FabArray::ParallelCopy_finish() 41 0.03606 0.04935 0.08899 2.65% amrex::Copy() 193 0.065 0.07916 0.08872 2.64% FabArray::setVal() 143 0.05287 0.06593 0.07157 2.13% Castro::reset_internal_energy(Fab) 1008 0.04328 0.04535 0.04763 1.42% Castro::normalize_species() 62 0.04435 0.04555 0.04715 1.40% FabArray::ParallelCopy_nowait() 41 0.03627 0.04111 0.04269 1.27% FillPatchIterator::Initialize 41 0.02825 0.03211 0.03422 1.02% StateData::FillBoundary(geom) 41 0.02764 0.03074 0.03241 0.96% Gravity::interpolate_monopole_grav() 21 0.02651 0.02686 0.0274 0.82% Castro::construct_new_gravity_source() 10 0.02297 0.02455 0.02666 0.79% Castro::computeTemp() 63 0.01727 0.01812 0.01894 0.56% Castro::initialize_do_advance() 10 0.01141 0.01626 0.01762 0.52% Castro::initialize_advance() 10 0.005235 0.01072 0.01407 0.42% FabArray::Saxpy() 20 0.01062 0.01258 0.01354 0.40% FabArray::setDomainBndry() 41 0.006949 0.01071 0.01276 0.38% VisMF::Write(FabArray) 2 0.00915 0.009757 0.01263 0.38% MultiFab::contains_nan() 20 0.01038 0.01134 0.01233 0.37% Castro::construct_old_gravity_source() 10 0.006853 0.009376 0.009906 0.29% Amr::writePlotFile() 2 0.007411 0.009362 0.009829 0.29% Castro::initMFs() 1 0.006581 0.00706 0.008276 0.25% Castro::construct_new_source() 50 0.005564 0.006081 0.006373 0.19% Castro::enforce_min_density() 62 0.005681 0.00604 0.006352 0.19% main() 1 0.003421 0.004114 0.004474 0.13% Gravity::get_new_grav_vector() 11 0.003117 0.003457 0.003805 0.11% Amr::coarseTimeStep() 10 0.001537 0.002118 0.003058 0.09% Gravity::get_old_grav_vector() 10 0.001522 0.00203 0.002379 0.07% Castro::finalize_do_advance() 10 0.0005437 0.001138 0.00156 0.05% AmrLevel::FillPatch() 41 0.000799 0.0009311 0.001022 0.03% Amr::timeStep() 10 0.0001284 0.0001781 0.0003878 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002672 0.000292 0.0003142 0.01% Castro::do_advance_ctu() 10 0.0001388 0.0001639 0.0002056 0.01% Castro::clean_state() 62 0.0001471 0.0001585 0.0001723 0.01% StateDataPhysBCFunct::() 41 0.0001078 0.0001195 0.0001342 0.00% FillPatchIterator::FillFromLevel0() 41 9.723e-05 0.0001083 0.0001182 0.00% Castro::do_old_sources() 10 6.884e-05 8.642e-05 0.000106 0.00% FabArray::ParallelCopy() 41 8.944e-05 9.532e-05 9.983e-05 0.00% Castro::Castro() 1 5.348e-05 7.915e-05 9.605e-05 0.00% Amr::FinalizeInit() 1 3.271e-06 1.514e-05 8.021e-05 0.00% Castro::construct_old_source() 50 4.335e-05 6.524e-05 7.788e-05 0.00% FillPatchSingleLevel 41 6.551e-05 7.043e-05 7.719e-05 0.00% Castro::do_new_sources() 10 4.633e-05 5.594e-05 6.528e-05 0.00% Castro::subcycle_advance_ctu() 10 4.371e-05 4.957e-05 5.69e-05 0.00% Castro::advance() 10 3.577e-05 4.566e-05 5.592e-05 0.00% Castro::apply_source_to_state() 20 3.745e-05 4.986e-05 5.338e-05 0.00% Castro::construct_old_gravity() 10 3.336e-05 3.742e-05 4.739e-05 0.00% Amr::defBaseLevel() 1 2.929e-05 3.324e-05 3.713e-05 0.00% Castro::construct_new_gravity() 10 2.989e-05 3.227e-05 3.64e-05 0.00% Castro::expand_state() 10 2.261e-05 2.588e-05 3.145e-05 0.00% Castro::check_for_nan() 20 2.254e-05 2.532e-05 2.89e-05 0.00% Castro::post_timestep() 10 1.366e-05 1.706e-05 2.082e-05 0.00% Castro::post_init() 1 1.423e-05 1.677e-05 1.984e-05 0.00% Amr::InitializeInit() 1 6.53e-06 8.323e-06 1.108e-05 0.00% Castro::computeNewDt() 9 8.579e-06 9.525e-06 1.099e-05 0.00% Amr::initialInit() 1 1.746e-06 2.891e-06 9.119e-06 0.00% Castro::computeInitialDt() 2 2.803e-06 3.382e-06 4.241e-06 0.00% Amr::init() 1 1.771e-06 2.133e-06 2.619e-06 0.00% Other 199 0.009391 0.01285 0.01458 0.43% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.357 3.358 3.359 100.00% Amr::coarseTimeStep() 10 3.182 3.182 3.182 94.75% Amr::timeStep() 10 3.17 3.17 3.171 94.41% Castro::advance() 10 3.154 3.155 3.155 93.95% Castro::subcycle_advance_ctu() 10 3.078 3.083 3.1 92.29% Castro::do_advance_ctu() 10 3.078 3.083 3.1 92.29% Castro::construct_ctu_hydro_source() 10 2.351 2.355 2.359 70.22% Gravity::make_radial_gravity() 21 0.3073 0.3144 0.3258 9.70% AmrLevel::FillPatch() 41 0.1861 0.1968 0.2126 6.33% Gravity::get_new_grav_vector() 11 0.2077 0.2092 0.2108 6.28% Castro::construct_old_gravity() 10 0.1823 0.1868 0.1969 5.86% Gravity::get_old_grav_vector() 10 0.1816 0.1861 0.1962 5.84% FillPatchIterator::Initialize 41 0.1528 0.1645 0.1886 5.61% Castro::construct_new_gravity() 10 0.1859 0.1863 0.1872 5.57% Castro::initialize_do_advance() 10 0.1603 0.164 0.1706 5.08% Amr::init() 1 0.1628 0.1638 0.1642 4.89% FillPatchIterator::FillFromLevel0() 41 0.1095 0.1217 0.1534 4.57% FillPatchSingleLevel 41 0.1094 0.1216 0.1533 4.56% Amr::initialInit() 1 0.1482 0.1496 0.15 4.47% check_for_negative_density() 10 0.02961 0.09534 0.1455 4.33% FabArray::ParallelCopy() 41 0.07771 0.09066 0.1255 3.74% Castro::expand_state() 10 0.1069 0.1111 0.1233 3.67% Amr::InitializeInit() 1 0.05864 0.09442 0.1231 3.67% Amr::defBaseLevel() 1 0.05863 0.09441 0.1231 3.67% Castro::clean_state() 62 0.1107 0.1146 0.1182 3.52% Castro::initData() 1 0.04145 0.07665 0.1053 3.13% Castro::do_old_sources() 10 0.08861 0.09281 0.09678 2.88% Castro::estTimeStep() 21 0.03146 0.05689 0.09533 2.84% Amr::FinalizeInit() 1 0.02688 0.05513 0.09066 2.70% FabArray::ParallelCopy_finish() 41 0.03606 0.04935 0.08899 2.65% amrex::Copy() 193 0.065 0.07916 0.08872 2.64% Castro::initialize_advance() 10 0.05099 0.06823 0.0738 2.20% FabArray::setVal() 143 0.05287 0.06593 0.07157 2.13% Castro::do_new_sources() 10 0.05959 0.06401 0.07088 2.11% Castro::computeTemp() 63 0.06085 0.06376 0.06688 1.99% Castro::computeInitialDt() 2 0.002123 0.03044 0.0659 1.96% Castro::reset_internal_energy(MultiFab) 63 0.04358 0.04564 0.04794 1.43% Castro::reset_internal_energy(Fab) 1008 0.04328 0.04535 0.04763 1.42% Castro::normalize_species() 62 0.04435 0.04555 0.04715 1.40% FabArray::ParallelCopy_nowait() 41 0.03639 0.04122 0.0428 1.27% Castro::construct_new_source() 50 0.02882 0.03064 0.03303 0.98% StateDataPhysBCFunct::() 41 0.02776 0.03086 0.03252 0.97% StateData::FillBoundary(geom) 41 0.02764 0.03074 0.03241 0.96% Gravity::interpolate_monopole_grav() 21 0.02651 0.02686 0.0274 0.82% Castro::construct_new_gravity_source() 10 0.02297 0.02455 0.02666 0.79% Castro::post_init() 1 0.02349 0.02415 0.02435 0.72% Castro::finalize_do_advance() 10 0.01254 0.01895 0.02306 0.69% Amr::writePlotFile() 2 0.02178 0.02186 0.02227 0.66% Castro::post_timestep() 10 0.01506 0.01555 0.01613 0.48% Castro::apply_source_to_state() 20 0.01065 0.01263 0.01359 0.40% FabArray::Saxpy() 20 0.01062 0.01258 0.01354 0.40% FabArray::setDomainBndry() 41 0.006949 0.01071 0.01276 0.38% VisMF::Write(FabArray) 2 0.00915 0.009757 0.01263 0.38% Castro::check_for_nan() 20 0.01041 0.01137 0.01236 0.37% MultiFab::contains_nan() 20 0.01038 0.01134 0.01233 0.37% Castro::Castro() 1 0.01068 0.01106 0.01182 0.35% Castro::construct_old_source() 50 0.006897 0.009442 0.009967 0.30% Castro::construct_old_gravity_source() 10 0.006853 0.009376 0.009906 0.29% Castro::computeNewDt() 9 0.008624 0.008651 0.008673 0.26% Castro::initMFs() 1 0.006581 0.00706 0.008276 0.25% Castro::enforce_min_density() 62 0.005681 0.00604 0.006352 0.19% Other 199 0.01924 0.02429 0.02739 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 29 B 34 B 44 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8659 KiB 8669 KiB 8672 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6785 KiB 6787 KiB 6789 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7139 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4579 KiB 4586 KiB 4608 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 211 KiB 222 KiB 242 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2814 KiB 2817 KiB 2818 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 233 KiB 238 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 35 KiB 41 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 79 KiB 80 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 69 KiB 71 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.10-11-g26054b26bb65) finalized