Initializing AMReX (25.10-11-g26054b26bb65)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.10-11-g26054b26bb65) initialized Starting run at 05:18:29 UTC on 2025-10-07. Successfully read inputs file ... Castro git describe: 25.10-1-g0b546a55c AMReX git describe: 25.10-11-g26054b26b Microphysics git describe: 25.10 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014310276 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.333244303 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.343927697 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.317229721 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.315637088 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.369799538 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.306878593 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.295064712 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.295381532 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.297809939 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.298326313 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007692619 seconds Ending run at 05:18:33 UTC on 2025-10-07. Run time = 3.365646828 Run time without initialization = 3.185859581 Average number of zones advanced per microsecond: 0.823 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3645 ... 3.3652 ... 3.3658 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1684 2.2240 2.3168 68.83% Gravity::make_radial_gravity() 21 0.2878 0.2981 0.312 9.27% check_for_negative_density() 10 0.006263 0.1008 0.1557 4.63% Castro::initData() 1 0.037 0.07249 0.1154 3.43% Castro::estTimeStep() 21 0.03208 0.07223 0.1032 3.07% amrex::Copy() 193 0.06375 0.07837 0.08655 2.57% FabArray::ParallelCopy_finish() 41 0.03969 0.05299 0.08502 2.53% FabArray::setVal() 143 0.05566 0.06594 0.07255 2.16% Castro::reset_internal_energy(Fab) 1008 0.04431 0.04572 0.04768 1.42% Castro::normalize_species() 62 0.04416 0.04498 0.0459 1.36% FabArray::ParallelCopy_nowait() 41 0.03605 0.04119 0.04252 1.26% FillPatchIterator::Initialize 41 0.02798 0.03204 0.03433 1.02% StateData::FillBoundary(geom) 41 0.02785 0.0308 0.03272 0.97% Gravity::interpolate_monopole_grav() 21 0.02632 0.02664 0.0271 0.81% Castro::construct_new_gravity_source() 10 0.02285 0.02467 0.02679 0.80% Castro::computeTemp() 63 0.01767 0.01805 0.01884 0.56% Castro::initialize_do_advance() 10 0.01215 0.0161 0.01763 0.52% Castro::initialize_advance() 10 0.005211 0.0106 0.01336 0.40% FabArray::Saxpy() 20 0.01078 0.01232 0.01321 0.39% MultiFab::contains_nan() 20 0.01039 0.01126 0.01246 0.37% FabArray::setDomainBndry() 41 0.007086 0.009874 0.01236 0.37% Amr::writePlotFile() 2 0.007556 0.009992 0.01199 0.36% VisMF::Write(FabArray) 2 0.008812 0.009584 0.01197 0.36% Castro::construct_old_gravity_source() 10 0.00688 0.009224 0.009725 0.29% Castro::initMFs() 1 0.006428 0.006983 0.00809 0.24% Castro::enforce_min_density() 62 0.005573 0.005961 0.006377 0.19% Castro::construct_new_source() 50 0.005464 0.005966 0.006309 0.19% main() 1 0.004055 0.004143 0.004301 0.13% Gravity::get_new_grav_vector() 11 0.002981 0.003521 0.00398 0.12% Gravity::get_old_grav_vector() 10 0.001533 0.002046 0.0024 0.07% Amr::coarseTimeStep() 10 0.001088 0.001468 0.002015 0.06% Castro::finalize_do_advance() 10 0.0005985 0.001141 0.001362 0.04% AmrLevel::FillPatch() 41 0.0008192 0.001196 0.001346 0.04% Amr::timeStep() 10 0.0001266 0.0001956 0.0004718 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002735 0.0002849 0.0003019 0.01% Castro::do_advance_ctu() 10 0.0001539 0.000175 0.0001947 0.01% StateDataPhysBCFunct::() 41 0.0001099 0.0001361 0.000174 0.01% Castro::clean_state() 62 0.0001408 0.0001534 0.0001678 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001007 0.0001108 0.0001265 0.00% Castro::do_old_sources() 10 7.076e-05 8.609e-05 0.0001111 0.00% FabArray::ParallelCopy() 41 8.663e-05 9.372e-05 9.873e-05 0.00% Castro::Castro() 1 5.464e-05 7.288e-05 9.424e-05 0.00% Amr::FinalizeInit() 1 2.886e-06 1.5e-05 9.389e-05 0.00% FillPatchSingleLevel 41 6.609e-05 7.153e-05 7.955e-05 0.00% Castro::construct_old_source() 50 5.345e-05 6.526e-05 7.635e-05 0.00% Castro::do_new_sources() 10 4.801e-05 5.512e-05 6.634e-05 0.00% Castro::subcycle_advance_ctu() 10 4.471e-05 4.975e-05 6.257e-05 0.00% Castro::apply_source_to_state() 20 4.187e-05 4.789e-05 5.695e-05 0.00% Castro::construct_new_gravity() 10 2.843e-05 3.591e-05 5.341e-05 0.00% Castro::advance() 10 3.935e-05 4.36e-05 4.952e-05 0.00% Castro::construct_old_gravity() 10 3.417e-05 4.044e-05 4.85e-05 0.00% Amr::defBaseLevel() 1 3.347e-05 3.82e-05 4.45e-05 0.00% Castro::expand_state() 10 2.187e-05 2.803e-05 3.343e-05 0.00% Castro::check_for_nan() 20 2.316e-05 2.773e-05 3.327e-05 0.00% Castro::post_timestep() 10 1.507e-05 1.771e-05 2.023e-05 0.00% Castro::post_init() 1 1.511e-05 1.697e-05 1.952e-05 0.00% Castro::computeNewDt() 9 8.273e-06 1.055e-05 1.354e-05 0.00% Amr::InitializeInit() 1 2.889e-06 4.122e-06 1.027e-05 0.00% Castro::computeInitialDt() 2 3.039e-06 3.538e-06 4.153e-06 0.00% Amr::initialInit() 1 1.321e-06 1.925e-06 2.436e-06 0.00% Amr::init() 1 2.034e-06 2.223e-06 2.384e-06 0.00% Other 199 0.01037 0.01293 0.01494 0.44% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.364 3.365 3.366 100.00% Amr::coarseTimeStep() 10 3.174 3.174 3.174 94.30% Amr::timeStep() 10 3.162 3.163 3.163 93.98% Castro::advance() 10 3.147 3.147 3.148 93.51% Castro::subcycle_advance_ctu() 10 3.071 3.076 3.09 91.81% Castro::do_advance_ctu() 10 3.071 3.076 3.09 91.81% Castro::construct_ctu_hydro_source() 10 2.34 2.346 2.353 69.92% Gravity::make_radial_gravity() 21 0.3045 0.3142 0.3257 9.68% AmrLevel::FillPatch() 41 0.189 0.1996 0.209 6.21% Gravity::get_new_grav_vector() 11 0.205 0.2064 0.2082 6.19% Castro::construct_old_gravity() 10 0.1822 0.189 0.1987 5.90% Gravity::get_old_grav_vector() 10 0.1815 0.1883 0.1981 5.88% Castro::construct_new_gravity() 10 0.1825 0.1836 0.1849 5.49% FillPatchIterator::Initialize 41 0.1573 0.1674 0.1846 5.48% Amr::init() 1 0.1781 0.1791 0.1796 5.34% Castro::initialize_do_advance() 10 0.1568 0.1623 0.1667 4.95% Amr::initialInit() 1 0.1637 0.1647 0.1652 4.91% check_for_negative_density() 10 0.006263 0.1008 0.1557 4.63% FillPatchIterator::FillFromLevel0() 41 0.1134 0.1255 0.1495 4.44% FillPatchSingleLevel 41 0.1133 0.1254 0.1494 4.44% Amr::InitializeInit() 1 0.05829 0.09412 0.1374 4.08% Amr::defBaseLevel() 1 0.05829 0.09411 0.1374 4.08% FabArray::ParallelCopy() 41 0.08184 0.09437 0.1213 3.60% Castro::initData() 1 0.04098 0.07636 0.1189 3.53% Castro::expand_state() 10 0.1036 0.1095 0.1185 3.52% Castro::clean_state() 62 0.1131 0.1143 0.1178 3.50% Amr::FinalizeInit() 1 0.02674 0.07053 0.1069 3.18% Castro::do_old_sources() 10 0.08973 0.0968 0.1035 3.07% Castro::estTimeStep() 21 0.03208 0.07223 0.1032 3.07% amrex::Copy() 193 0.06375 0.07837 0.08655 2.57% FabArray::ParallelCopy_finish() 41 0.03969 0.05299 0.08502 2.53% Castro::computeInitialDt() 2 0.002228 0.04611 0.08243 2.45% Castro::initialize_advance() 10 0.05315 0.06779 0.0726 2.16% FabArray::setVal() 143 0.05566 0.06594 0.07255 2.16% Castro::do_new_sources() 10 0.05987 0.06381 0.06964 2.07% Castro::computeTemp() 63 0.06234 0.06406 0.06682 1.99% Castro::reset_internal_energy(MultiFab) 63 0.04459 0.04601 0.04798 1.43% Castro::reset_internal_energy(Fab) 1008 0.04431 0.04572 0.04768 1.42% Castro::normalize_species() 62 0.04416 0.04498 0.0459 1.36% FabArray::ParallelCopy_nowait() 41 0.03619 0.04128 0.0426 1.27% Castro::construct_new_source() 50 0.02874 0.03064 0.03303 0.98% StateDataPhysBCFunct::() 41 0.028 0.03094 0.03284 0.98% StateData::FillBoundary(geom) 41 0.02785 0.0308 0.03272 0.97% Gravity::interpolate_monopole_grav() 21 0.02632 0.02664 0.0271 0.81% Castro::construct_new_gravity_source() 10 0.02285 0.02467 0.02679 0.80% Castro::post_init() 1 0.02379 0.02403 0.02412 0.72% Castro::finalize_do_advance() 10 0.01238 0.0189 0.02345 0.70% Amr::writePlotFile() 2 0.0221 0.0222 0.02268 0.67% Castro::post_timestep() 10 0.01511 0.01561 0.01599 0.48% Castro::apply_source_to_state() 20 0.01082 0.01236 0.01327 0.39% FabArray::Saxpy() 20 0.01078 0.01232 0.01321 0.39% Castro::check_for_nan() 20 0.01042 0.01129 0.01249 0.37% MultiFab::contains_nan() 20 0.01039 0.01126 0.01246 0.37% FabArray::setDomainBndry() 41 0.007086 0.009874 0.01236 0.37% VisMF::Write(FabArray) 2 0.008812 0.009584 0.01197 0.36% Castro::Castro() 1 0.01015 0.01093 0.01184 0.35% Castro::construct_old_source() 50 0.006942 0.009289 0.009795 0.29% Castro::construct_old_gravity_source() 10 0.00688 0.009224 0.009725 0.29% Castro::computeNewDt() 9 0.008347 0.008374 0.008395 0.25% Castro::initMFs() 1 0.006428 0.006983 0.00809 0.24% Castro::enforce_min_density() 62 0.005573 0.005961 0.006377 0.19% Other 199 0.02037 0.02452 0.02776 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 35 B 46 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8660 KiB 8669 KiB 8671 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6751 KiB 6756 KiB 6758 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7140 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4560 KiB 4566 KiB 4588 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 212 KiB 222 KiB 236 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2802 KiB 2805 KiB 2806 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 230 KiB 238 KiB 246 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 37 KiB 42 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 78 KiB 78 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 69 KiB 71 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.10-11-g26054b26bb65) finalized